Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_F18
(1320 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 448 e-124
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 394 e-108
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 330 4e-89
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 247 4e-64
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 239 1e-61
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 123 2e-56
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 213 1e-53
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 190 7e-47
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 187 6e-46
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 187 6e-46
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 184 6e-45
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 182 2e-44
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 179 1e-43
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 178 3e-43
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 177 4e-43
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 177 7e-43
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 176 9e-43
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 175 3e-42
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 174 4e-42
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 174 4e-42
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 173 6e-42
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 173 6e-42
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 171 3e-41
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 171 3e-41
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 171 3e-41
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 170 8e-41
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 169 1e-40
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 169 2e-40
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 166 1e-39
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 165 2e-39
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 165 3e-39
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 165 3e-39
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 164 4e-39
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 164 5e-39
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 164 5e-39
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 163 7e-39
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 163 7e-39
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 163 9e-39
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 163 1e-38
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 163 1e-38
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 162 2e-38
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 162 2e-38
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 162 2e-38
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 161 3e-38
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 161 3e-38
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 161 4e-38
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 160 6e-38
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 160 6e-38
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 160 6e-38
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 159 1e-37
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 158 3e-37
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 158 3e-37
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 157 6e-37
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 157 6e-37
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 157 6e-37
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 157 8e-37
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 156 1e-36
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 156 1e-36
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 156 1e-36
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 156 1e-36
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 155 2e-36
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 155 2e-36
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 155 3e-36
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 154 4e-36
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 154 6e-36
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 153 7e-36
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 153 7e-36
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 153 1e-35
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 153 1e-35
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 153 1e-35
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 153 1e-35
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 152 2e-35
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 152 2e-35
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 152 2e-35
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 152 2e-35
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 152 2e-35
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 152 2e-35
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 152 2e-35
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 151 3e-35
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 151 3e-35
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 151 3e-35
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 151 4e-35
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 151 4e-35
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 151 5e-35
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 150 7e-35
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 150 7e-35
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 150 7e-35
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 150 9e-35
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 149 1e-34
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 149 1e-34
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 149 1e-34
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 149 1e-34
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 149 2e-34
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 149 2e-34
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 149 2e-34
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 149 2e-34
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 149 2e-34
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 149 2e-34
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 149 2e-34
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 149 2e-34
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 148 3e-34
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 148 3e-34
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 148 4e-34
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 147 5e-34
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 147 5e-34
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 147 6e-34
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 147 6e-34
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 146 8e-34
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 146 1e-33
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 146 1e-33
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 146 1e-33
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 146 1e-33
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 146 1e-33
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 146 1e-33
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 145 2e-33
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 145 2e-33
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 145 2e-33
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 145 2e-33
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 145 2e-33
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 145 3e-33
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 144 3e-33
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 144 3e-33
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 144 3e-33
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 144 3e-33
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 144 5e-33
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 144 5e-33
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 144 6e-33
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 144 6e-33
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 143 8e-33
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 143 8e-33
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 143 1e-32
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 143 1e-32
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 143 1e-32
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 142 1e-32
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 142 2e-32
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 142 2e-32
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 142 2e-32
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 142 2e-32
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 142 2e-32
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 142 2e-32
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 142 2e-32
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 142 2e-32
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 142 2e-32
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 142 2e-32
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 141 3e-32
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 141 4e-32
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 141 4e-32
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 141 4e-32
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 141 4e-32
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 140 6e-32
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 140 6e-32
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 140 7e-32
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 140 7e-32
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 140 7e-32
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 140 7e-32
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 140 7e-32
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 140 1e-31
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 139 1e-31
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 139 1e-31
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 139 1e-31
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 139 1e-31
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 139 2e-31
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 139 2e-31
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 139 2e-31
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 138 2e-31
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 138 2e-31
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 138 2e-31
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 138 3e-31
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 138 3e-31
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 138 3e-31
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 138 4e-31
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 137 5e-31
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 137 7e-31
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 137 7e-31
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 137 7e-31
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 137 7e-31
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 137 7e-31
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 137 7e-31
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 137 7e-31
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 136 9e-31
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 136 9e-31
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 136 9e-31
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 136 1e-30
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 136 1e-30
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 136 2e-30
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 136 2e-30
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 136 2e-30
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 136 2e-30
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 136 2e-30
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 136 2e-30
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 136 2e-30
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 136 2e-30
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 136 2e-30
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 135 2e-30
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 135 2e-30
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 135 2e-30
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 135 3e-30
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 135 3e-30
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 135 3e-30
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 134 4e-30
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 134 4e-30
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 134 4e-30
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 134 4e-30
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 134 5e-30
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 134 5e-30
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 134 5e-30
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 134 5e-30
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 134 5e-30
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 134 6e-30
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 134 6e-30
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 134 6e-30
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 134 6e-30
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 134 6e-30
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 134 6e-30
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 134 6e-30
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 134 6e-30
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 134 6e-30
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 133 8e-30
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 133 8e-30
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 133 8e-30
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 133 8e-30
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 133 8e-30
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 133 1e-29
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 133 1e-29
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 133 1e-29
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 133 1e-29
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 133 1e-29
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 132 1e-29
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 132 1e-29
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 132 1e-29
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 132 1e-29
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 132 1e-29
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 132 2e-29
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 132 2e-29
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 132 2e-29
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 132 3e-29
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 132 3e-29
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 132 3e-29
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 131 3e-29
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 131 3e-29
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 131 5e-29
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 131 5e-29
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 131 5e-29
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 131 5e-29
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 131 5e-29
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 131 5e-29
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 131 5e-29
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 130 6e-29
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 130 6e-29
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 130 6e-29
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 130 6e-29
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 130 6e-29
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 130 6e-29
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 130 8e-29
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 130 8e-29
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 130 1e-28
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 130 1e-28
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 130 1e-28
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 130 1e-28
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 130 1e-28
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 130 1e-28
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 130 1e-28
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 130 1e-28
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 130 1e-28
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 130 1e-28
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 130 1e-28
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 129 1e-28
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 129 1e-28
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 129 1e-28
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 129 1e-28
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 129 1e-28
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 129 1e-28
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 129 1e-28
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 129 1e-28
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 129 2e-28
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 129 2e-28
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 129 2e-28
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 129 2e-28
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 129 2e-28
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 128 2e-28
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 128 2e-28
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 128 2e-28
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 128 2e-28
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 128 3e-28
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 128 3e-28
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 128 3e-28
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 128 3e-28
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 128 4e-28
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 128 4e-28
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 128 4e-28
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 128 4e-28
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 128 4e-28
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 128 4e-28
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 127 6e-28
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 127 6e-28
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 127 6e-28
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 127 6e-28
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 127 6e-28
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 127 6e-28
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 127 6e-28
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 127 7e-28
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 127 7e-28
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 127 7e-28
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 127 7e-28
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 127 7e-28
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 127 7e-28
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 126 1e-27
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 126 1e-27
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 126 1e-27
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 126 1e-27
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 126 1e-27
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 126 1e-27
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 126 1e-27
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 126 1e-27
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 126 2e-27
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 125 2e-27
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 125 2e-27
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 125 2e-27
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 125 2e-27
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 125 3e-27
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 125 3e-27
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 124 4e-27
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 124 4e-27
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 124 4e-27
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 124 4e-27
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 124 5e-27
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 124 5e-27
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 124 5e-27
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 124 5e-27
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 124 5e-27
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 124 5e-27
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 124 5e-27
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 124 7e-27
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 124 7e-27
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 124 7e-27
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 124 7e-27
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 124 7e-27
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 124 7e-27
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 124 7e-27
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 124 7e-27
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 123 9e-27
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 123 9e-27
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 123 1e-26
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 123 1e-26
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 123 1e-26
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 123 1e-26
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 122 2e-26
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 122 2e-26
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 122 2e-26
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 122 2e-26
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 122 2e-26
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 122 2e-26
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 122 2e-26
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 122 2e-26
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 122 3e-26
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 122 3e-26
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 122 3e-26
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 122 3e-26
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 122 3e-26
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 121 4e-26
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 121 4e-26
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 121 4e-26
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 121 4e-26
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 121 4e-26
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 121 4e-26
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 121 5e-26
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 121 5e-26
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 121 5e-26
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 120 6e-26
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 120 6e-26
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 120 6e-26
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 120 6e-26
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 120 8e-26
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 120 8e-26
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 120 8e-26
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 120 8e-26
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 120 1e-25
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 120 1e-25
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 120 1e-25
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 119 1e-25
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 119 1e-25
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 119 2e-25
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 119 2e-25
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 118 3e-25
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 118 3e-25
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 118 3e-25
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 118 3e-25
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 118 3e-25
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 118 3e-25
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 118 3e-25
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 118 3e-25
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 118 3e-25
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 118 3e-25
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 118 3e-25
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 118 4e-25
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 118 4e-25
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 118 4e-25
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 118 4e-25
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 118 4e-25
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 118 4e-25
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 118 4e-25
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 117 6e-25
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 117 6e-25
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 117 8e-25
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 117 8e-25
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 116 1e-24
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 116 1e-24
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 116 1e-24
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 116 1e-24
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 116 1e-24
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 116 1e-24
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 116 1e-24
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 116 1e-24
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 116 2e-24
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 115 2e-24
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 115 2e-24
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 115 2e-24
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 115 3e-24
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 115 3e-24
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 115 3e-24
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 114 4e-24
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 114 4e-24
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 114 4e-24
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 114 4e-24
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 114 4e-24
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 114 4e-24
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 114 4e-24
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 114 4e-24
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 114 6e-24
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 114 6e-24
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 114 6e-24
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 114 6e-24
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 114 6e-24
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 113 7e-24
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 113 7e-24
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 113 7e-24
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 113 7e-24
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 113 7e-24
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 113 7e-24
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 113 1e-23
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 113 1e-23
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 113 1e-23
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 113 1e-23
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 113 1e-23
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 113 1e-23
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 113 1e-23
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 113 1e-23
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 113 1e-23
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 113 1e-23
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 113 1e-23
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 112 2e-23
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 112 2e-23
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 112 2e-23
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 112 2e-23
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 112 2e-23
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 95 2e-23
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 112 2e-23
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 112 2e-23
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 112 2e-23
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 111 3e-23
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 111 3e-23
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 111 3e-23
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 111 3e-23
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 111 3e-23
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 111 3e-23
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 111 3e-23
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 111 4e-23
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 111 4e-23
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 111 4e-23
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 111 4e-23
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 111 4e-23
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 111 4e-23
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 111 4e-23
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 111 4e-23
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 111 5e-23
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 111 5e-23
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 111 5e-23
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 111 5e-23
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 111 5e-23
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 111 5e-23
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 110 7e-23
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 110 7e-23
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 110 7e-23
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 110 7e-23
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 110 7e-23
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 110 9e-23
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 110 9e-23
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 110 9e-23
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 110 9e-23
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 110 9e-23
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 109 1e-22
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 109 1e-22
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 109 1e-22
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 109 1e-22
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 109 1e-22
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 109 1e-22
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 109 1e-22
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 109 1e-22
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 109 1e-22
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 109 1e-22
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=366;
root|Rep: Eukaryotic initiation factor 4A-III - Homo
sapiens (Human)
Length = 411
Score = 448 bits (1103), Expect = e-124
Identities = 220/292 (75%), Positives = 247/292 (84%), Gaps = 1/292 (0%)
Frame = +3
Query: 150 MTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 329
M +S + R + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 330 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 509
R+I I+KGRDVIAQ+QSGTGKTATFSIS+LQ LD +RETQ LIL+PTRELA QIQK +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGL 126
Query: 510 LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 689
LALGD+MNVQCHACIGGTN+GEDIRKLDYGQHVV+GTPGRVFDMIRRR LRTR+IKMLVL
Sbjct: 127 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVL 186
Query: 690 DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL 869
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMT+KFMTDPIRILVKRDEL
Sbjct: 187 DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDEL 246
Query: 870 TLEGIKQFXVAVEREEWKXXXXXXXXXXXXXXKQYIW-*YKEXGDWLXQXMQ 1022
TLEGIKQF VAVEREEWK + I+ K DWL + M+
Sbjct: 247 TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR 298
Score = 38.3 bits (85), Expect = 0.44
Identities = 24/43 (55%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 973 IFGNTKRXVTGSHRXCR-GNFTVSSMXGDMPXK-RETXFXXFR 1095
IF NTKR V R NFTVSSM GDMP K RE+ FR
Sbjct: 282 IFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 324
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 394 bits (971), Expect = e-108
Identities = 204/292 (69%), Positives = 230/292 (78%), Gaps = 1/292 (0%)
Frame = +3
Query: 150 MTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 329
M +S + R + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 330 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 509
R+I I+KGRDVIAQ+QSGTGKTATFS+S+LQ LD IQ +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLD--------------------IQG-L 105
Query: 510 LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 689
LALGD+MNVQCHACIGGTN+GEDIRKLDYGQHVV+GTPGRVFDMIRRR LRTR+IKMLVL
Sbjct: 106 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVL 165
Query: 690 DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL 869
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMT+KFMTDPIRILVKRDEL
Sbjct: 166 DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDEL 225
Query: 870 TLEGIKQFXVAVEREEWKXXXXXXXXXXXXXXKQYIW-*YKEXGDWLXQXMQ 1022
TLEGIKQF VAVEREEWK + I+ K DWL + M+
Sbjct: 226 TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR 277
Score = 35.1 bits (77), Expect = 4.1
Identities = 20/33 (60%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 973 IFGNTKRXVTGSHRXCR-GNFTVSSMXGDMPXK 1068
IF NTKR V R NFTVSSM GDMP K
Sbjct: 261 IFCNTKRKVDWLTEKMREANFTVSSMHGDMPQK 293
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 330 bits (812), Expect = 4e-89
Identities = 166/284 (58%), Positives = 206/284 (72%), Gaps = 3/284 (1%)
Frame = +3
Query: 234 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 413
E++ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 414 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
SILQ L+ +ETQ L+L+PTRELA QIQKVILALGD+M CHACIGGTN+ +++KL
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 594 -YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
H+V GTPGRVFDM+ RR L + IKM VLDEADEML++GFK+QIY++++ L + Q
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
Query: 771 VVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWKXXXXXXXXX 950
VVL+SAT+P ++LE+T KFM DPIRILVK++ELTLEGIKQF + VEREEWK
Sbjct: 210 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 269
Query: 951 XXXXXKQYIW-*YKEXGDWLXQXMQ-RQFHCQLNARGHAXKERD 1076
+ I+ + DWL + M R F KERD
Sbjct: 270 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERD 313
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 247 bits (605), Expect = 4e-64
Identities = 114/250 (45%), Positives = 176/250 (70%), Gaps = 6/250 (2%)
Frame = +3
Query: 192 EDLSNVEFDTSED-----VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG 356
E L N+ ++D +E + TF+ + L +LLRGI++YGFE+PSAIQQ++I PI+ G
Sbjct: 34 EHLKNIMDQQTQDLQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILG 93
Query: 357 RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNV 536
+DV+AQAQSGTGKT TF+I LQ +D R+TQV+IL+P RELA QI V+ +G ++N+
Sbjct: 94 KDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNI 153
Query: 537 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK 716
+ CIGGT+ E K G H++ TPGR+ DM++ + L +++LV+DEAD+ML++
Sbjct: 154 EAFCCIGGTSTQETREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQ 213
Query: 717 GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTD-PIRILVKRDELTLEGIKQF 893
GF + ++ + +P Q+ L SAT P EI+E++ +F+ D +ILVK+++LTLEGI+QF
Sbjct: 214 GFSDNFAEILKMVPGDIQIALFSATFPQEIIELSKQFLRDGTAKILVKKEQLTLEGIRQF 273
Query: 894 XVAVEREEWK 923
+A+++E+ K
Sbjct: 274 YIAIQQEDQK 283
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 239 bits (585), Expect = 1e-61
Identities = 110/240 (45%), Positives = 167/240 (69%)
Frame = +3
Query: 204 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 383
NVE+ T+E+ + TF+SM LR ELLRGI +GF +P +QQR+++P+++GRDV+ Q
Sbjct: 9 NVEWKTNEEPIIQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFR 68
Query: 384 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 563
TGKT S+S+L D ++++ QVLIL TR+L + +I+ALG F+NV HAC G
Sbjct: 69 STGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGN 128
Query: 564 NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDV 743
++ +DI + G +V GTP RVF++++R+ + +KM++LDEADEML K +Y +
Sbjct: 129 SIQDDISVVQQGVQIVLGTPDRVFELVQRKEISFAHLKMIILDEADEMLIDESKSLVYCI 188
Query: 744 YRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
++YLPP Q VL++ATL +IL+ KF +P+ I+ KR+ELTLEGI+QF + V++E+WK
Sbjct: 189 FKYLPPKPQYVLVTATLSQDILDFIEKFFNNPLVIMDKRNELTLEGIQQFFIQVDKEDWK 248
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 123 bits (297), Expect(2) = 2e-56
Identities = 57/92 (61%), Positives = 75/92 (81%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 419
+ +F+ M L + LLRGI+ YGFEKPSAIQQ++I+P +KG DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 420 LQTLDTTLRETQVLILSPTRELATQIQKVILA 515
LQ +D +TQ +IL+PTRELA QIQKV+L+
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
Score = 120 bits (289), Expect(2) = 2e-56
Identities = 52/99 (52%), Positives = 76/99 (76%)
Frame = +3
Query: 627 RVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEI 806
RVFD++ RR + ++I++LVLDEAD+ML GFK+QI++++ LP Q +L+SAT+P +
Sbjct: 112 RVFDVLARRAVSAKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPTNVQAILLSATMPAHV 171
Query: 807 LEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
LE T FM DP++IL+KR+ELT+EGI+QF + E EE K
Sbjct: 172 LEATKMFMQDPVKILIKREELTMEGIQQFYIKTETEEKK 210
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; n=1;
Trichomonas vaginalis G3|Rep: DEAD/DEAH box helicase
family protein - Trichomonas vaginalis G3
Length = 389
Score = 213 bits (519), Expect = 1e-53
Identities = 114/279 (40%), Positives = 172/279 (61%), Gaps = 1/279 (0%)
Frame = +3
Query: 186 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 365
+SE + +F ++ +EV PT++SM L+ EL+ I G+EKPS IQQR+I I +G+++
Sbjct: 1 MSEVHEDRQFQSNVPLEVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNI 60
Query: 366 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 545
+ Q+Q+G+GKTATFSI L L T + T+++I+SPTRELA Q + + +LG
Sbjct: 61 MFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTR 116
Query: 546 ACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFK 725
AC+GG +LG D++ L G H VSGTPGR+ +++ ++ ++ +VLDEADEML FK
Sbjct: 117 ACVGGNSLGADVKALQKGIHCVSGTPGRILQLLKEHNIQAEKVQSVVLDEADEMLT-SFK 175
Query: 726 EQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
I D+ + LP A Q V+++AT+ +++E+ + + + + I V RDELTL GI Q+ V V
Sbjct: 176 STIMDILQKLPHA-QKVIVTATVSADVVELATAHLRNSVEIRVPRDELTLTGIDQYVVRV 234
Query: 906 EREEWKXXXXXXXXXXXXXXKQYIW*YK-EXGDWLXQXM 1019
E EEWK K I+ E G+WL M
Sbjct: 235 ENEEWKFDTLIDIYQSIAIEKAVIFVNSVEKGNWLKGKM 273
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 190 bits (463), Expect = 7e-47
Identities = 104/227 (45%), Positives = 138/227 (60%), Gaps = 4/227 (1%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI--VKGRDVIAQAQSGTGKTATFSI 413
+ FD M L LL+G+Y+YGF PS IQ +I I R VIAQAQSGTGKT FSI
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSI 149
Query: 414 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIR-K 587
+L +D + + TQ L+L+PTRELATQI V +G + + IGG D + +
Sbjct: 150 GVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRVVDAQAR 209
Query: 588 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 767
H+ TPGR D+I LR ++ KM VLDEAD+ML+ F EQ+ D+ Y P
Sbjct: 210 AASHPHICICTPGRALDLIVSGHLRVQNFKMAVLDEADQMLSDNFIEQVNDIMEYFPEDV 269
Query: 768 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
Q++L SAT+ I + + FM DP RIL+K+++LTLEGIKQF V V+
Sbjct: 270 QILLFSATISQSIFHIMNTFMNDPFRILIKKEQLTLEGIKQFYVDVQ 316
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 187 bits (455), Expect = 6e-46
Identities = 90/224 (40%), Positives = 139/224 (62%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF +GL D LL+ + + GFE+ + IQ +I ++G+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+DT Q ++++PTRELA Q+ + + +G V+ GG ++ IR L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ GTPGR+ D I R+ LR ++++ +VLDEADEMLN GF E I + +P Q +L S
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
AT+P I + +FMT+P I VK E+T+ I+QF + V+ ++
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK 226
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 187 bits (455), Expect = 6e-46
Identities = 95/224 (42%), Positives = 136/224 (60%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF+ L+ ELL GI+ GFEKPS IQ+ +I + GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+ L + Q LI+ PTRELA Q +V+ LG + C GGTNL +DI +L+ H
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVH 166
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ GTPGRV D+ R+V + ++DEAD+ML++ FK I + +LPP Q +L S
Sbjct: 167 ILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFS 226
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
AT P + E K + P I + +ELTL+GI Q+ VE +
Sbjct: 227 ATFPLTVKEFMVKHLHKPYEINL-MEELTLKGITQYYAFVEERQ 269
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 184 bits (447), Expect = 6e-45
Identities = 93/233 (39%), Positives = 145/233 (62%), Gaps = 2/233 (0%)
Frame = +3
Query: 222 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 401
S + + T++ GL+++LL+GIY+ GFE PS IQ+ +I PI+ GRD+ AQAQSGTGKT
Sbjct: 31 SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTG 90
Query: 402 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 581
F+++ LQ D + TQ+L+L+ TRE+A Q LG FM + GG+ + D
Sbjct: 91 AFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADK 150
Query: 582 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL-- 755
L+ H+V GTPGRV MI L +IK+ V+DEADEML GF+EQ+ ++R +
Sbjct: 151 VALEKKPHIVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQEQVKSIFRRITN 210
Query: 756 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
Q+ + SAT E L ++ + + +P+ I ++ ++ TL+GI+Q+ + + +E
Sbjct: 211 KDEVQIAMFSATYDEEELRVSEEILINPVIIDLRYNDQTLKGIRQYFIDLRKE 263
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 182 bits (442), Expect = 2e-44
Identities = 93/220 (42%), Positives = 135/220 (61%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF + L +++L+ + GFE+PS IQ ++I +++G+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
L R Q L+L+PTRELA Q+ + I +G V+ A GG ++ IR L +G
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVD 126
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
VV GTPGR+ D + R L ++M+VLDEADEML+ GF E I + + P Q +L S
Sbjct: 127 VVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLFS 186
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
AT+P EI + ++M DPI I V +LT+ I Q+ V
Sbjct: 187 ATMPPEIRRLAGRYMRDPITISVTPQQLTVPQIDQYFCEV 226
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 179 bits (436), Expect = 1e-43
Identities = 101/232 (43%), Positives = 139/232 (59%), Gaps = 2/232 (0%)
Frame = +3
Query: 234 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 413
+++ T + + + L+ T +KPSA+ QR I+P+ G D+I Q+ GT T T
Sbjct: 45 DIVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCC 102
Query: 414 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
ILQ LD E Q L+L PT +LA + Q VI LG F++ + HA GGT+ ED + L
Sbjct: 103 GILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILS 162
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G V GTP V M++ R L I+M VLDEADE+L +GFK+QI+ + ++LP TQ
Sbjct: 163 TGVQVAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQF 221
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGI--KQFXVAVEREEWK 923
SA++ HE LEM K+M P+ I+V RDE LEGI KQF V VE+E+ K
Sbjct: 222 GFFSASMSHEALEMCRKYMNKPVEIIVPRDE-ELEGINVKQFYVNVEKEDCK 272
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 178 bits (433), Expect = 3e-43
Identities = 85/213 (39%), Positives = 134/213 (62%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+FD +GL + + R I +G+E+P+ +Q + P+ G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+ R L++ PTRELA Q+ + AL ++ A GG ++GE ++KL+ G
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAE 140
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ GTPGR++D IRRR L+ + LDEADEMLN GF E++ + LP Q +L S
Sbjct: 141 IIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPKDCQQLLFS 200
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGI 884
AT+P +I ++ ++TDP IL+ DE ++E I
Sbjct: 201 ATVPADIEQIIRDYLTDPETILLSGDEYSVENI 233
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 177 bits (432), Expect = 4e-43
Identities = 88/228 (38%), Positives = 139/228 (60%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 419
+ +F + L++ + +G++ S IQ +++P++KGRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 420 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 599
L ++ Q LIL PTREL+ QI+ V L + +C GG LGED++ L
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDLKNLKKN 128
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
H + GTPGRV +++ L I+ VLDEAD ++NK FK I+++YRYL Q+++
Sbjct: 129 FHGIVGTPGRVLHLLQIGSLAITKIRTFVLDEADILMNKNFKIDIFNIYRYLNSKVQIII 188
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
SAT+P L+ SKF+ DP+ IL++++E+ ++ IKQF ++V EE K
Sbjct: 189 CSATIPLYTLQAASKFLLDPVMILMRKEEINIDKIKQFYISVFIEENK 236
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 177 bits (430), Expect = 7e-43
Identities = 95/230 (41%), Positives = 133/230 (57%), Gaps = 1/230 (0%)
Frame = +3
Query: 231 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 410
+E TF + +ELL+ I GFE+P+ IQ +I I+ G+DV QAQ+GTGKTA F
Sbjct: 1 MEETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFG 60
Query: 411 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRK 587
I I++ LD + Q L+LSPTRELA Q + L + + GG + +R
Sbjct: 61 IPIIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRA 120
Query: 588 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 767
L VV GTPGRV D I+R L S+ M +LDEAD+ML+ GF+E I D++R P
Sbjct: 121 LKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDR 180
Query: 768 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
Q +L SAT+P IL++T +F DP + + R ELT+ I+Q + V +
Sbjct: 181 QTILFSATMPQPILDITRRFQRDPQFVKITRKELTVPQIEQTYIEVRERD 230
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 176 bits (429), Expect = 9e-43
Identities = 94/224 (41%), Positives = 134/224 (59%), Gaps = 1/224 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+ GLR ELL GIYT GFE+PS IQ+++I + GRD++A+A++GTGKTA+F I L
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 605
++T+L Q LIL PTRELA Q +V LG + N+Q GGT L +DI +L H
Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVH 157
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ GTPGR+ D+ + + + V+DEAD++L++ F I P QV+L S
Sbjct: 158 ILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTLALCPQERQVMLFS 217
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
AT P + E + M P I + DELTL+G+ Q+ VE +
Sbjct: 218 ATFPWTVKEFKDQHMVQPYEINL-MDELTLKGVTQYYAYVEESQ 260
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 175 bits (425), Expect = 3e-42
Identities = 86/210 (40%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 422
+F ++GL DE+L + GF P+ IQ+++I +++G RD++ QAQ+GTGKTA F I IL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 423 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
+T+D + R TQ LIL+PTRELA Q+ + I ++ + GG ++ IR+L G
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGV 122
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
+V GTPGR+ D I RR ++ ++ +VLDEADEMLN GF + + ++ + + +++L
Sbjct: 123 QIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRMLLF 182
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELT 872
SATLP I+++ +M + I VKR +LT
Sbjct: 183 SATLPDSIMKLAKNYMREYDIIKVKRQQLT 212
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 174 bits (424), Expect = 4e-42
Identities = 89/224 (39%), Positives = 134/224 (59%), Gaps = 1/224 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL E++ I + G+ + + IQ+++I ++ G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYGQH 605
+D ++ +TQ LIL PTRELA Q+ + L F ++ A GG ++ IR L G H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V GTPGR+ D + RR L + ++LDEADEMLN GF+E I + LP Q VL S
Sbjct: 123 IVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVLFS 182
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
ATL IL + +F +P I ++R ELT+ ++QF V+ +
Sbjct: 183 ATLAPPILALAKRFQNNPEIIKIERKELTISTVEQFYYLVKNSQ 226
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 174 bits (424), Expect = 4e-42
Identities = 87/224 (38%), Positives = 133/224 (59%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF +GL E+++ I GFE+ + IQ ++I ++ +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
++ Q L+++PTRELA Q+ + + +G V+ GG ++ IR L H
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
V+ GTPGR+ D I R LR + +VLDEADEMLN GF E I + ++P Q +L S
Sbjct: 123 VIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFS 182
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
AT+P I + +FM +P + VK E+T+ I+Q+ + V ++
Sbjct: 183 ATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKK 226
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 173 bits (422), Expect = 6e-42
Identities = 92/226 (40%), Positives = 134/226 (59%), Gaps = 3/226 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
FD +GL++ LL+ I GFE+PS IQ SI ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 429 LDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
D + + + LIL+PTRELA Q+ + ++ LG + GG + IR L G
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGV 125
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
+V GTPGRV D+IRR+ L I LVLDEADEMLN GF + + ++ + L Q +L
Sbjct: 126 DIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLLF 185
Query: 783 SATLPHEILEMTSKFM-TDPIRILVKRDELTLEGIKQFXVAVEREE 917
SAT+P +I ++ +M D I +K+ LT+ I+QF ++ +
Sbjct: 186 SATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRD 231
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 173 bits (422), Expect = 6e-42
Identities = 93/223 (41%), Positives = 130/223 (58%), Gaps = 1/223 (0%)
Frame = +3
Query: 243 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 422
PTF + L +L + T G+E PS IQ ++I +++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 9 PTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLL 68
Query: 423 QTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYG 599
LD RE QVL+L+PTRELA Q+ + G ++ + GG E + L G
Sbjct: 69 SRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRG 128
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
V+ GTPGRV D + R L+ + LVLDEADEML GF + + V P Q V
Sbjct: 129 AQVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDVKRVVSDTPKDAQRVF 188
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
SATLP EI + + ++ DP+RI ++ T EGI+Q V +E
Sbjct: 189 FSATLPDEISRIVNHYLVDPLRIAIETKTKTAEGIEQRLVRIE 231
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 171 bits (417), Expect = 3e-41
Identities = 91/215 (42%), Positives = 129/215 (60%), Gaps = 1/215 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F S+GL LLR I G+E+PS IQ++SI +++G+DV+ AQ+GTGKTA F++ +L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 605
+RE QVL+L+PTRELA Q+ + + NV+ + GG++ G R L G
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
V GTPGRV D IRR L+ I+ +VLDEADEML GF + + V +P Q+ L S
Sbjct: 128 WVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALFS 187
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
AT+P +I + K + +P I +K T E I+Q
Sbjct: 188 ATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQ 222
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 171 bits (416), Expect = 3e-41
Identities = 86/233 (36%), Positives = 143/233 (61%), Gaps = 1/233 (0%)
Frame = +3
Query: 198 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 377
+++ + +T + E + F S+GL + LL + + GF + IQ +I P++ G+DV+ +A
Sbjct: 1 MTDQKTETVTEPEAV-AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEA 59
Query: 378 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACI 554
Q+GTGKTA F + L +DT++++ Q+++L+PTRELA Q+ + I + G D ++
Sbjct: 60 QTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLY 119
Query: 555 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 734
GG + G ++L+ G VV GTPGR+ D +RR+ L+ +++ VLDEADEMLN GF E I
Sbjct: 120 GGQSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDI 179
Query: 735 YDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQF 893
+ ++P Q+ L SAT+P I ++ ++F+ DP I V + I Q+
Sbjct: 180 QWILDHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQY 232
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 171 bits (416), Expect = 3e-41
Identities = 82/224 (36%), Positives = 132/224 (58%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF L +L++ I GFE+ + IQ ++I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
++ Q ++++PTRELA Q+ + + +G + GG ++G IR L +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ GTPGR+ D I RR +R ++ +V+DEADEMLN GF + I + +P Q +L S
Sbjct: 124 IIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFS 183
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
AT+P I + +FMT+P + VK E+T+ I+QF + V+ +
Sbjct: 184 ATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERK 227
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 170 bits (413), Expect = 8e-41
Identities = 91/221 (41%), Positives = 130/221 (58%), Gaps = 1/221 (0%)
Frame = +3
Query: 231 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 410
+E + +F + L +ELL+ I GF +PS IQ +I +++GRDVI QAQ+GTGKTA F
Sbjct: 1 MESVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFG 60
Query: 411 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRK 587
+ +LQ +D R Q L+L PTRELA Q+ + AL + V+ + GG +
Sbjct: 61 LPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASA 120
Query: 588 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 767
L G VV GTPGR+ D I R L+ ++M VLDEADEML+ GF+E I + +P
Sbjct: 121 LRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWV 180
Query: 768 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
Q SAT+P ILE+ +F+ +P + V R +LT+ +Q
Sbjct: 181 QSAFFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQ 221
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 169 bits (411), Expect = 1e-40
Identities = 87/216 (40%), Positives = 126/216 (58%), Gaps = 1/216 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF +GL LL+ + + G+E P+ IQ ++I+ ++ G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 602
+DTT + Q L+L PTRELA Q+ + + N GG ++ +R L
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNP 125
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
V+ GTPGRV D +RR L +K LVLDEADEML GF E I + + P Q L
Sbjct: 126 QVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPKDKQTALF 185
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
SAT+PH+I +T ++ DP++I +K L+ I+Q
Sbjct: 186 SATMPHQIKRITDQYQKDPVKIEIKASHSELQQIEQ 221
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 169 bits (410), Expect = 2e-40
Identities = 89/224 (39%), Positives = 131/224 (58%)
Frame = +3
Query: 234 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 413
E + F+ + + +E+ + I GFE+PS IQ ++I I+ G DVI QAQ+GTGKTA F I
Sbjct: 3 EAMIKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGI 62
Query: 414 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
+++ + T R Q LIL+PTRELA Q+ I L ++ GG ++ I+ L
Sbjct: 63 PVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALK 121
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G VV GTPGR+ D +RR+ L + ++LDEADEML+ GF + I + R + Q
Sbjct: 122 QGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQT 181
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
+L SAT+P I +++ K+M DP + + R E+T I QF V
Sbjct: 182 LLFSATMPPAIKKLSRKYMNDPQTVSINRREVTAPSIDQFYYKV 225
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 166 bits (403), Expect = 1e-39
Identities = 77/142 (54%), Positives = 106/142 (74%)
Frame = +3
Query: 498 QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIK 677
+KVI+ LG+F+ V +AC GGT+ ED ++L G VV GTPGRV D+I+++ L T +K
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGVQVVVGTPGRVLDLIQKKTLVTDHLK 245
Query: 678 MLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVK 857
+ +LDEADEML +GFK+QI +++ LP QV L SAT+ EILE+T +FM DP ILVK
Sbjct: 246 LFILDEADEMLGRGFKDQINKIFQNLPHDIQVALFSATMAPEILEITKQFMRDPATILVK 305
Query: 858 RDELTLEGIKQFXVAVEREEWK 923
D+LTL+GIKQF +A+++EEWK
Sbjct: 306 NDDLTLDGIKQFYIALDKEEWK 327
Score = 105 bits (251), Expect = 3e-21
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Frame = +3
Query: 282 RGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVL 461
+ + +YGFEKPS IQQ I+PI+KG+D IAQAQSGTGKTATFSI+ LQ +DT+ TQ L
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQAL 106
Query: 462 ILSPTRELATQ-IQKVILALG 521
IL+PTRELA Q I ++ LG
Sbjct: 107 ILAPTRELAQQTITRIFFILG 127
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 165 bits (402), Expect = 2e-39
Identities = 86/216 (39%), Positives = 121/216 (56%), Gaps = 1/216 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF +GL+ +L + G+EKPS IQ I ++ GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 602
LD L+ Q+L+L+PTRELA Q+ + + M V A GG +R L G
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
+V GTPGR+ D ++R L + LVLDEADEML GF E + + +P Q L
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALF 186
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
SAT+P I +T +FM +P + ++ T I Q
Sbjct: 187 SATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQ 222
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 165 bits (400), Expect = 3e-39
Identities = 84/165 (50%), Positives = 117/165 (70%)
Frame = +3
Query: 51 SFPLVI*KFRF*EIFTYRLTCYFKNLEAN*IRKMTSSEVSSXRKILSEDLSNVEFDTSED 230
SFPL+ K + EI YR+ K++ A M + R +D + F+T+E
Sbjct: 215 SFPLLQLKSKSKEIGRYRVR--EKSMAATATTSMVPANRGGCRNSAVDD-EKLVFETTEG 271
Query: 231 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 410
VE+I +FD MG++++LLRGIY Y FEKPSA+QQR++LPI++G DVIAQAQSGTGKT+ F+
Sbjct: 272 VELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTSMFA 331
Query: 411 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 545
+++ Q +DT+ RE Q LI SPTRELA+Q +KVILA+GD +N+Q H
Sbjct: 332 LTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 165 bits (400), Expect = 3e-39
Identities = 96/243 (39%), Positives = 147/243 (60%), Gaps = 4/243 (1%)
Frame = +3
Query: 189 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 362
++DLS+ T + + P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 43 AQDLSSPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 101
Query: 363 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 539
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLE 161
Query: 540 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKG 719
CH IGGT L +D +L H+ G+PGR+ +I L SI++ +LDEAD++L +G
Sbjct: 162 CHVFIGGTPLSQDKTRLK-KCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220
Query: 720 -FKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFX 896
F+EQI +Y LP + Q++ +SAT P + +K+M DP + + + +L G+KQ+
Sbjct: 221 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYY 280
Query: 897 VAV 905
V
Sbjct: 281 KVV 283
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 164 bits (399), Expect = 4e-39
Identities = 88/205 (42%), Positives = 124/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISIL 422
TFD +GL LL+ I GFE PS IQ+ +I ++ + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 423 QTLDTTLRETQVLILSPTRELATQI-QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 599
Q +D + + TQ LI++PTREL QI ++ L V+ A GG+N+ E R++ G
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRG 121
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
+V TPGR+ DM+RRR++ + VLDEADEMLN GF E I ++ P L
Sbjct: 122 AQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYEDITNILADTPEDKLTWL 181
Query: 780 ISATLPHEILEMTSKFMTDPIRILV 854
SAT+P E+ + +FM DP+ I V
Sbjct: 182 FSATMPREVARIAKEFMHDPLEITV 206
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 164 bits (398), Expect = 5e-39
Identities = 85/215 (39%), Positives = 122/215 (56%), Gaps = 1/215 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL D +++ + G+E PS IQ +I ++ GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+ QVL+L+PTRELA Q+ + + GG + G+ + L G H
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
V+ GTPGRV D + R L +K LVLDEADEML GF E + +V R LP + QV L S
Sbjct: 137 VIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFS 196
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
AT+P +I + ++ DPI + + T I+Q
Sbjct: 197 ATMPPQIRRIAQTYLQDPIEVTIATKTTTAANIRQ 231
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 164 bits (398), Expect = 5e-39
Identities = 85/204 (41%), Positives = 119/204 (58%), Gaps = 2/204 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSI-LPIVKGRDVIAQAQSGTGKTATFSISILQ 425
F+ +GL + LLR I GFE P+ +Q+++I + + K D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQ 602
+D R TQ LILSPTREL QI + + + A GG ++ E R + G
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
++ TPGR+ DMI RR++ I +LDEADEMLN GF E I ++ P L
Sbjct: 124 QIIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYEDIVNILSTTPDEKNTWLF 183
Query: 783 SATLPHEILEMTSKFMTDPIRILV 854
SAT+P E+ + +FMTDPI I V
Sbjct: 184 SATMPAEVARIGKQFMTDPIEITV 207
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 163 bits (397), Expect = 7e-39
Identities = 84/214 (39%), Positives = 134/214 (62%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
FD GL+D +L+GI GF PS +Q +SI I++G+D+IAQAQ+GTGKTA F+I IL T
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNT 106
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
L+ ++ + LI++PTRELA QI + IL LG F ++ GG ++ L+
Sbjct: 107 LNRN-KDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLLEKKPKA 165
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
+ TPGR+ D ++ + S +++VLDE+DEML+ GF + I +++++LP Q +L SA
Sbjct: 166 MIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLDMGFLDDIEEIFKFLPNTRQTLLFSA 225
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
T+P I + K + +P + + ++T + I+Q
Sbjct: 226 TMPEPIKALAMKILNEPAFVKITPTDVTNQDIEQ 259
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 163 bits (397), Expect = 7e-39
Identities = 77/217 (35%), Positives = 131/217 (60%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +G+ +E+ + +P+ +Q ++I P++ RDV+AQAQ+GTGKT F + IL+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
++ Q LI++PTRELA QI L + + A GG ++ + +RKL H+
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIHI 124
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
+ GTPGR+ D +RR+ + + MLVLDEAD+ML+ GF + D+ ++P Q + SA
Sbjct: 125 IIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQNMFFSA 184
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXV 899
T+P+++ + ++M DP++I V+ +TL+ I+Q +
Sbjct: 185 TMPNQVRTLAEQYMKDPVQIQVQSKRVTLDEIRQVVI 221
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 163 bits (396), Expect = 9e-39
Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 1/223 (0%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 419
IP+F + L +++ I G+E+P+ IQQ I I+ G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 420 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDY 596
++ R Q ++L P+RELA Q+ + L + GG + I+ L
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSR 122
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G ++ GTPGRV D I+R+ L ++ ++VLDEAD+ML+ GF+E I ++ ++P Q V
Sbjct: 123 GVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQTV 182
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
++SAT P EIL+++ +F +PI + + ELT+ I+Q+ + V
Sbjct: 183 ILSATFPPEILDISRRFQKNPIDVKMVHQELTVPQIEQYYIEV 225
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 163 bits (395), Expect = 1e-38
Identities = 92/252 (36%), Positives = 143/252 (56%), Gaps = 1/252 (0%)
Frame = +3
Query: 153 TSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQR 332
+++E S+ +E + V D ++ E FD G + LL+ + G+ PS IQ+
Sbjct: 42 STAEPSTTEASTTEVTAEVTADEAKS-EPQSGFDGFGFSEALLKTLADKGYSDPSPIQKA 100
Query: 333 SILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVIL 512
+ ++ GRD++ QAQ+GTGKTA F++ +L+ L++ + QVL+L+PTRELA Q+
Sbjct: 101 AFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFK 160
Query: 513 ALG-DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 689
A +++ A GGT+ I L G VV GTPGRV D +R+ L T + LVL
Sbjct: 161 AYAAGHPHLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVL 220
Query: 690 DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL 869
DEADEML GF + + + LP QVVL SAT+P EI ++ +++ DP + +K +
Sbjct: 221 DEADEMLRMGFIDDVEWILEQLPKERQVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKDQ 280
Query: 870 TLEGIKQFXVAV 905
+ I+Q + V
Sbjct: 281 DGKLIRQRAITV 292
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 163 bits (395), Expect = 1e-38
Identities = 92/219 (42%), Positives = 128/219 (58%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F SMGL+ +LL+ I GFEKP+ IQ +SI + G D++ QAQ+GTGKTA+F I IL
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+ Q L+L PTRELA Q+ + I +L M +Q A GG ++ +R L +
Sbjct: 66 VIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
+ GTPGR+ D + R + +K +VLDEADEML+ GF I + P Q L SA
Sbjct: 125 IVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFLFSA 184
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
TLP E+ E+ +KFM P IL++ E T+ I+Q+ V
Sbjct: 185 TLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYYYQV 223
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 162 bits (393), Expect = 2e-38
Identities = 90/238 (37%), Positives = 141/238 (59%), Gaps = 2/238 (0%)
Frame = +3
Query: 186 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 362
++ +LS E + +++ TF MGL ++L G+ GF KPS IQ +SI P+ + G D
Sbjct: 5 IAHNLSAKERTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI-PLGRCGFD 63
Query: 363 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQ 539
+I +A+SGTGKTA F I L+ +D + QV+IL+PTRE+A QI++VI +LG + ++
Sbjct: 64 LIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLK 123
Query: 540 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKG 719
+ IGG + D +KL H+ G PGRV +I + L+ +++ VLDEAD+++ +
Sbjct: 124 VESFIGGVAMDIDRKKLS-NCHIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEES 182
Query: 720 FKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQF 893
F++ I +Y LPP QV+ SAT P ++ +M PI D L G++QF
Sbjct: 183 FQKDINYIYAKLPPNRQVISSSATYPGDLEIFLESYMQSPILSSADNDGPILVGLRQF 240
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 162 bits (393), Expect = 2e-38
Identities = 87/226 (38%), Positives = 132/226 (58%), Gaps = 2/226 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+FD + L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI IL+
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILE 104
Query: 426 TLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 599
LD+ R+ Q +++ PTRELA Q+ L + + GG N+ +R+L+ G
Sbjct: 105 QLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLENG 164
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
+V GTPGRV D ++R LRT ++ +VLDEAD ML+ GF+ QI + R P Q +L
Sbjct: 165 TQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNRQTLL 224
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
+SATLP + + +M +P+ I RDE+ ++ I+Q + +++
Sbjct: 225 LSATLPPVVRRLAESYMHEPVVIDCCRDEMAVDTIEQRYFTIAQDD 270
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 162 bits (393), Expect = 2e-38
Identities = 87/224 (38%), Positives = 128/224 (57%), Gaps = 1/224 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F ++G+ +L I G+E+PS IQ ++I I+ G D+I QAQ+GTGKTA F++ +L
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 605
+D RE Q+LIL+PTRELA Q+ + V A GG +G ++ L G
Sbjct: 85 IDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQ 144
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ TPGR+ D +RR ++K LVLDEADEML GF E + ++ LP + Q VL S
Sbjct: 145 ILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQTVLFS 204
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
ATLPH I E+ K + +P + + T+ I Q + V ++
Sbjct: 205 ATLPHSIREIAEKHLHEPQHVKIAAKTQTVARIDQAHLMVHADQ 248
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 161 bits (392), Expect = 3e-38
Identities = 80/222 (36%), Positives = 126/222 (56%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F +G+ E + + GF P+ IQ ++I ++ GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
LD + Q ++L+PTRELA Q+ + ++ A GG ++ + +L G H
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVH 123
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V GTPGRV D++ R L+ +K VLDEADEML+ GF + + + P Q L S
Sbjct: 124 IVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFS 183
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
AT+P I + +KF+ P+ + V++ + T I Q + R
Sbjct: 184 ATMPPSIRMLVNKFLRSPVTVTVEQPKATPNKINQVAYLIPR 225
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 161 bits (392), Expect = 3e-38
Identities = 85/218 (38%), Positives = 125/218 (57%), Gaps = 1/218 (0%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 419
I F + + L + + F PS IQ ++I I++GRD IA AQ+GTGKTA F++ I
Sbjct: 5 ISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPI 64
Query: 420 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDY 596
LQ L + TQ LIL+PTRELA Q+ + L + NV GG G +++L
Sbjct: 65 LQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRS 124
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G VV GTPGR+ D I + L ++K +LDEADEML GF E + + LP Q+
Sbjct: 125 GAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQMA 184
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
L SAT+P+ I ++ + ++ DP I ++ + T++ I+Q
Sbjct: 185 LFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQ 222
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 161 bits (391), Expect = 4e-38
Identities = 94/243 (38%), Positives = 144/243 (59%), Gaps = 4/243 (1%)
Frame = +3
Query: 189 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 362
+ D+ T + V P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 44 AHDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 102
Query: 363 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 539
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLE 162
Query: 540 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKG 719
CH IGGT L +D +L H+ G+PGR+ +I L SI++ +LDEAD++L +G
Sbjct: 163 CHVFIGGTPLSQDKTRLK-KCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 221
Query: 720 -FKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFX 896
F+EQI +Y LP + Q++ +SAT P + +++M DP + + + +L G+KQ+
Sbjct: 222 SFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYY 281
Query: 897 VAV 905
V
Sbjct: 282 QVV 284
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 160 bits (389), Expect = 6e-38
Identities = 88/223 (39%), Positives = 130/223 (58%), Gaps = 2/223 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F G +L + G++ P+ IQ+ +I ++ GRD++ QAQ+GTGKTA F++ +++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 429 L-DTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L D +VL+++PTRELATQ+ + + + N + A GGT+ I L
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKV 172
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
VV GTPGR+ D IR+ + SI LVLDEADEMLN GF E I + LP Q+VL
Sbjct: 173 DVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNKQMVLF 232
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
SAT+P+EI + K++ DP IL+K + + I Q + V+R
Sbjct: 233 SATMPNEIRNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQR 275
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 160 bits (389), Expect = 6e-38
Identities = 84/223 (37%), Positives = 128/223 (57%), Gaps = 1/223 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F + + E+ + + GFE+ S IQ +I I+ +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 605
+D+ Q +IL PTRELA Q+ + + L ++ + GG + I+ L G
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQ 125
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ GTPGRV D I R L +IK ++LDEADEML+ GF+E I + +P Q +L S
Sbjct: 126 IIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQFLLFS 185
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
ATLP EIL++ ++ T+P + V + ELT ++Q V+ +
Sbjct: 186 ATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKED 228
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 160 bits (389), Expect = 6e-38
Identities = 85/247 (34%), Positives = 152/247 (61%), Gaps = 5/247 (2%)
Frame = +3
Query: 198 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG--RDVIA 371
L++++ D + + + +F + L ++L++GI GF+KPS IQ++++ ++ R++I
Sbjct: 133 LADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIG 192
Query: 372 QAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHAC 551
Q+QSGTGKTA F++++L +D T+ Q + ++P+RELA QIQ+VI +G F V
Sbjct: 193 QSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLA 252
Query: 552 IGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR--RVLRTRSIKMLVLDEADEML-NKGF 722
I G+ R + ++ GTPG + DM+ R R+L R I++LVLDEADE++ +G
Sbjct: 253 IPGS----WSRNSRIDKQILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGL 308
Query: 723 KEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVA 902
EQ + + + LPP Q VL SAT ++ E +F + +I ++++++T++ I+Q +
Sbjct: 309 GEQTFRIKQLLPPNVQNVLFSATFNDDVQEFADRFAPEANKIFLRKEDITVDAIRQLYLE 368
Query: 903 VEREEWK 923
+ E+ K
Sbjct: 369 CDSEDQK 375
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 159 bits (387), Expect = 1e-37
Identities = 83/233 (35%), Positives = 138/233 (59%), Gaps = 5/233 (2%)
Frame = +3
Query: 234 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 413
E +F ++GL L++ + G+ KP+ IQ ++I +++G+D+ AQ+GTGKTA F++
Sbjct: 3 ETSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFAL 62
Query: 414 SILQTLDTT-----LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGED 578
+ L T R ++LILSPTRELA+QI + + + +A GG +G
Sbjct: 63 PSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQ 122
Query: 579 IRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 758
+R LD G ++ TPGR+ D+I +R L + +++ VLDEAD+ML+ GF + + + LP
Sbjct: 123 MRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLP 182
Query: 759 PATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
Q + SAT+P I E++S+F++DP+ + V T E ++QF + V + E
Sbjct: 183 KNRQTLFFSATMPKTIQELSSQFLSDPVTVSVAPQSSTAERVEQFGIFVNQSE 235
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 158 bits (384), Expect = 3e-37
Identities = 88/220 (40%), Positives = 124/220 (56%), Gaps = 3/220 (1%)
Frame = +3
Query: 210 EFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGT 389
+ D +EDV F + LR ELLR + G+E+P+ IQ+ ++ P+V GRD++ QA +GT
Sbjct: 49 DIDPAEDVA---GFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGT 105
Query: 390 GKTATFSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 560
GKTA F++ +L L T Q L+L PTRELA Q+ + I G + + GG
Sbjct: 106 GKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGG 165
Query: 561 TNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYD 740
+G +R L G VV TPGR D + R LR + +VLDEADEML+ GF E I
Sbjct: 166 APIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDA 225
Query: 741 VYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKR 860
+ P Q VL SATLP + ++ + + DP+RI + R
Sbjct: 226 ILEQAPQKRQTVLFSATLPPRMDQIARRHLRDPVRIQIGR 265
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 158 bits (384), Expect = 3e-37
Identities = 84/226 (37%), Positives = 131/226 (57%), Gaps = 1/226 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F L DELL+ I FE P+ +QQ+ I I++ +D+I ++Q+G+GKTA F+I I Q
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPICQL 65
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+D + Q L+L PTRELA Q+++ + +G F ++ A G ++L HV
Sbjct: 66 VDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKTHV 125
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
V GTPGR+ D + + T IK LV+DEADEM N GF +QI + + L +L+SA
Sbjct: 126 VVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVTMLLSA 185
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE-REEWK 923
T+P I +++++M DPI ++ + ++ I Q VE R++ K
Sbjct: 186 TMPSAIETLSNRYMKDPIHAEIEEESSAVDRISQERYTVEYRDKMK 231
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 157 bits (381), Expect = 6e-37
Identities = 84/226 (37%), Positives = 134/226 (59%), Gaps = 3/226 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILP--IVKGRDVIAQAQSGTGKTATFSISIL 422
F+ GL +E+L I G+EKP+ IQ + +LP + +D+IAQAQ+GTGKTA F I +L
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQ-KIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLL 78
Query: 423 QTLDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 599
+ +D + + +I++PTRELA QI + + +L V+ GG +L + + L+ G
Sbjct: 79 ERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKG 138
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
+V GTPGR+ D + R L ++ LVLDEAD ML+ GF + + ++ + + L
Sbjct: 139 VDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKRTFL 198
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
SAT+P EI+++ KFM + I + +DELT E +Q V+ ++
Sbjct: 199 FSATMPKEIVDIARKFMKEYIHVSTVKDELTTENAEQLYFEVDEKD 244
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 157 bits (381), Expect = 6e-37
Identities = 81/224 (36%), Positives = 130/224 (58%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF+ +G+ +L+ I GF+ P+ +Q ++I I+ D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+ Q LIL+P RELA Q+ I + ++ + A G N+ + + L+ G
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQILNKGVS 123
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V+GTPGRVFD I L T++I+ LVLDEAD ML+ GF +Q+ + + LP +L S
Sbjct: 124 IVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKERITLLFS 183
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
AT+P EI + ++M +P+ I ++ T++ I Q V E
Sbjct: 184 ATMPPEIHNICKRYMNNPVTIEIESQTKTVDTIHQVYYRVNYNE 227
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 157 bits (381), Expect = 6e-37
Identities = 81/205 (39%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF+ +GL + +L+ + GFE PS IQQ I ++ G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVI-LALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
+D + + Q+L+++PTRELA Q+ L + + GG +R L G
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA 125
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
VV GTPGR+ D IRR L ++ +VLDEADEML GF + + V LP Q L
Sbjct: 126 QVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTALF 185
Query: 783 SATLPHEILEMTSKFMTDPIRILVK 857
SAT+P I +T +FM DP + +K
Sbjct: 186 SATMPEPIRRITKRFMNDPQEVKIK 210
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 157 bits (380), Expect = 8e-37
Identities = 81/215 (37%), Positives = 126/215 (58%), Gaps = 1/215 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+S+GL D L + + G+E + IQ +I +++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYGQH 605
+D +R Q L+L PTRELA Q+ + + G M ++ + GG ++ + ++ L G H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V TPGR+ D I RR + I +VLDEADEML GF + + + P +V L S
Sbjct: 131 IVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKVALFS 190
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
AT+P + ++ +K +++P I V T E I+Q
Sbjct: 191 ATMPKRVRDIANKHLSNPAEISVAAAATTNENIEQ 225
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 156 bits (379), Expect = 1e-36
Identities = 81/227 (35%), Positives = 132/227 (58%), Gaps = 1/227 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F+ M L +L + F P+ IQ ++I +++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYGQ 602
+D ++++TQVL+++PTRELA Q+ + + M V GG G ++ L G
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGT 128
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
+V GTPGR+ D++ + VL+ +K+ VLDEADEMLN GF E I + + +P Q L
Sbjct: 129 AIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPNTAQRALF 188
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
SAT+P+ I ++ F+ DP+ I +E I + ++++ WK
Sbjct: 189 SATMPNAIRKLAKTFLKDPLNI-------QIEAIAREKATIKQKAWK 228
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 156 bits (379), Expect = 1e-36
Identities = 87/228 (38%), Positives = 125/228 (54%), Gaps = 1/228 (0%)
Frame = +3
Query: 225 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 404
ED + + TF S+GL +E+L + GF P+ IQ +I P+++ RDV+ AQ+GTGKTA
Sbjct: 40 EDTDTV-TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAA 98
Query: 405 FSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDI 581
F + +L +D R Q L+L+PTRELA Q + I + GG+ G I
Sbjct: 99 FGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQI 158
Query: 582 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 761
L G VV GTPGRV D+I + L ++MLVLDEADEML GF E + + P
Sbjct: 159 GALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSAPD 218
Query: 762 ATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
L SAT+P I ++ + + DP+++ V + T++ I Q V
Sbjct: 219 DRLTALFSATMPAAIEKVAREHLKDPVKVAVSTESSTVDTIHQTYAVV 266
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 156 bits (378), Expect = 1e-36
Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 3/223 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL +++ + G+E P+ IQQ +I I+ GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 429 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACI-GGTNLGEDIRKLDYG 599
+D R+ QVL+L+PTRELA Q+ + A + ACI GG G IR L G
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
VV GT GRV D I + L+ +++ LVLDEADEML GF + + V ++ Q +L
Sbjct: 129 VKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSDECQRLL 188
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
SAT+P +I ++ +++ +P +I VK T + Q + ++
Sbjct: 189 FSATIPTDIADIIEEYLRNPCKIQVKAKTKTANTVTQKFIVIK 231
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 156 bits (378), Expect = 1e-36
Identities = 80/224 (35%), Positives = 124/224 (55%), Gaps = 1/224 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F +GL +L + G+E PS IQ +SI ++ G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIRKLDYGQ 602
+D + E Q+L+L+PTRELA Q+ + F N GG + IR L G
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGA 144
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
V+ GTPGR+ D +R+ L+ +K LVLDEADEML GF + + + P Q L
Sbjct: 145 QVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFIDDVEAILAKTPDTCQRALF 204
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
SAT+P +I ++ ++ + + ++ + T+E I QF + V E
Sbjct: 205 SATMPPQIKKVAQTYLKNATEVRIESETRTVERIAQFVLPVYAE 248
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 155 bits (377), Expect = 2e-36
Identities = 83/218 (38%), Positives = 136/218 (62%), Gaps = 2/218 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISIL 422
+F S+ L D++ +G+ GF+KPS IQ ++I P+ + G D+I +++SGTGKT FS L
Sbjct: 25 SFASLLLPDDIKQGLSVSGFKKPSPIQFKAI-PLGRCGFDLIVKSKSGTGKTLVFSTIAL 83
Query: 423 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYG 599
+T++T QVLIL PTRE+A QI+ V+ ++G +N ++ + IGG L +D++K
Sbjct: 84 ETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPLEDDLKKSSKC 143
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
H+ G PGRV +++ L T +K+ VLDEAD+++ + F+ I ++Y LPP Q+++
Sbjct: 144 -HIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEESFQSDINEIYNSLPPRKQMIV 202
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQF 893
SAT P E+ + +M P + + + L G+KQF
Sbjct: 203 SSATYPQELDTFLANYMQSPTHVTSENETPLLLGLKQF 240
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 155 bits (377), Expect = 2e-36
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 1/224 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF + + +LR I G+E P+AIQ +I ++ G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYGQ 602
+D T + Q L+L PTRELA Q+ + G +++ + GG++ + L G
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
VV GTPGR+ D + R L + LVLDEADEML GF + + + P QV L
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
SAT+P I ++++K++ DP + K E I Q + V R+
Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVARK 237
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 155 bits (375), Expect = 3e-36
Identities = 78/228 (34%), Positives = 136/228 (59%), Gaps = 5/228 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISI 419
F +GL +L+ + G+ P+ IQ+++I P+++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 420 LQTLDTTL--RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L+ D + + ++L+L+PTREL +QI G ++ + +GGT++ +D KL
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLH 123
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G ++ TPGR+ D+I ++ S+++LVLDEAD+ML+ GF + + + +P Q
Sbjct: 124 RGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKERQT 183
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
+ SAT+P I E+ S + +P+++ V + T E I Q+ V+++E
Sbjct: 184 LFFSATMPKAIKELVSGYCNNPVQVSVTPESTTAERIDQYLFMVQQDE 231
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 154 bits (374), Expect = 4e-36
Identities = 78/222 (35%), Positives = 130/222 (58%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F + + ++LR + G+ +P+ +QQ I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+ + Q LIL+PTRELA Q+++ I +G F ++ A G ++ + +L H+
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHI 123
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
V GTPGRV D I + L + LV+DEADEMLN GF EQ+ + ++LP +L SA
Sbjct: 124 VVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSA 183
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
TLP +I +++ ++M +P I VK LT I+ + V E
Sbjct: 184 TLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREE 225
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 154 bits (373), Expect = 6e-36
Identities = 77/212 (36%), Positives = 124/212 (58%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
FD M L + + + G+ P+ +Q R+ P ++G+D+I ++++GTGKTA F + +L+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+ R + LIL PTRELA Q+ + L ++ A GG ++ + L+ G +
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPI 150
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
+ GTPGRVFD I R L+ + VLDEADEMLN+GF E++ + LP QV+L SA
Sbjct: 151 IVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTRQVLLFSA 210
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGI 884
T+P +I + +++ T+ +L+ D T+E I
Sbjct: 211 TVPTDIQNLIARYTTNAETLLLSGDVFTVEHI 242
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 153 bits (372), Expect = 7e-36
Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 1/224 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F SMGL + L G+ G+ P+ IQ+++I I++G D+IA A++G+GKTA + + I+
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 429 LDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
L+T E + LI+ PTRELA Q KV LG N++ IGG+ L + L G
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ TPGR+ ++ + ++M+ DEAD M GF EQ+ D+ R LPP Q++L S
Sbjct: 135 IIVATPGRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVSDIMRMLPPTRQILLFS 194
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
ATLP + E + P I + +E + F V+ E
Sbjct: 195 ATLPRNLAEFLKNTLKQPEIIRLDTEERLSPDLDNFFYHVKEHE 238
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 153 bits (372), Expect = 7e-36
Identities = 87/259 (33%), Positives = 152/259 (58%), Gaps = 3/259 (1%)
Frame = +3
Query: 147 KMTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 326
K S + S + L++++ D + + +FD +GL ELL+GIY F+KPS IQ
Sbjct: 60 KQEDSNLISSEYEVKVKLADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQ 119
Query: 327 QRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 500
+R++ ++ R++IAQ+QSGTGKTA FS+++L ++ Q + L+P+RELA Q
Sbjct: 120 ERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTL 179
Query: 501 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 680
+V+ +G F + + + E ++++ V+ GTPG V D++RR++++ + IK+
Sbjct: 180 EVVQEMGKFTKITSQLIV--PDSFEKNKQIN--AQVIVGTPGTVLDLMRRKLMQLQKIKI 235
Query: 681 LVLDEADEMLN-KGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVK 857
VLDEAD ML+ +G +Q V R+LP TQ+VL SAT + + K + + + ++
Sbjct: 236 FVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNANTLELQ 295
Query: 858 RDELTLEGIKQFXVAVERE 914
+E+ ++ IKQ + + E
Sbjct: 296 TNEVNVDAIKQLYMDCKNE 314
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 153 bits (371), Expect = 1e-35
Identities = 73/223 (32%), Positives = 133/223 (59%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F + L ++R ++ GFE+ + IQ+++I ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+ T + Q L++ PTRELA Q+ + + +G ++ A GG + ++ L+ H+
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPHI 123
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
V GTPGR+ + +RR +RT I++ VLDEAD+ML+ GF ++ + + LP Q +L SA
Sbjct: 124 VVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQTLLFSA 183
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
TL + + K++ DP I + + +T+ Q+ + + ++
Sbjct: 184 TLSPPVQMLARKYLKDPELIEFEEEGITVPTTVQYYIEMPEKQ 226
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 153 bits (370), Expect = 1e-35
Identities = 79/182 (43%), Positives = 118/182 (64%), Gaps = 1/182 (0%)
Frame = +3
Query: 357 RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMN 533
+D+I QA+SGTGKT FS+ L+ +D T TQVLIL+PTRE+A QIQ I A+G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 534 VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLN 713
++ H IGGT G D +KL H+ GTPGR+ +I VL+T +I++ VLDEAD++L+
Sbjct: 64 LRSHVFIGGTLFGPDRQKLKKC-HIAVGTPGRIKQLIEYEVLKTGTIRLFVLDEADKLLD 122
Query: 714 KGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQF 893
F+EQ+ +Y +L Q++ +SAT P + + +K+M +P+ + + +L L GIKQ
Sbjct: 123 DTFQEQVNWIYNHLSDNKQMLALSATYPEYLAKHLTKYMREPMFVRLNPKDLALRGIKQL 182
Query: 894 XV 899
V
Sbjct: 183 YV 184
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 153 bits (370), Expect = 1e-35
Identities = 80/218 (36%), Positives = 122/218 (55%), Gaps = 1/218 (0%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 419
I +F + LR LL + G+E PS IQ I ++ G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 420 LQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDY 596
L LD ++ QVL+L+PTRELA Q+ + + GG ++ +R+L
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLAR 162
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G HV+ GTPGRV D I R+ L S+ LVLDEADEML GF + + + ++ P Q
Sbjct: 163 GAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAERQTA 222
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
L SAT+P I + +++ +P + +K T+ +Q
Sbjct: 223 LFSATMPDAIRRVAHRYLREPREVKIKASTTTVSTTRQ 260
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 153 bits (370), Expect = 1e-35
Identities = 82/227 (36%), Positives = 132/227 (58%), Gaps = 5/227 (2%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F S+GL D LLR + ++ P+ +Q ++I ++ G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 426 TL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 590
L + +VL+L PTRELA Q+ + +A G ++++ A GG ++ + KL
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
Query: 591 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
G V+ TPGR+ D+ R+ ++ ++ LVLDEAD ML+ GF ++ V+ LP Q
Sbjct: 122 RKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQRQ 181
Query: 771 VVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
+L SAT +I M + + P+ I V T IKQ+ V V++
Sbjct: 182 TLLFSATFSDDIRAMAATILRGPVNISVSPPNATASKIKQWVVTVDK 228
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 152 bits (369), Expect = 2e-35
Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+S L + + + GF +P+ IQ +SI PI+ G DV+A AQ+GTGKTA F I +L T
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 429 LDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
L + + L+++PTRELA QI +V +G + ++ GG I DY
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAADY 122
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G ++ TPGR+FD+I ++ ++ +K+LVLDEAD ML+ GF + I DV ++LP Q +
Sbjct: 123 GIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDVKKFLPARHQTL 182
Query: 777 LISATLPHEILEMTSKFMTDPIRILV 854
SAT+ EI ++ + +PIRI +
Sbjct: 183 FFSATINEEIKKLAYSLVKNPIRIQI 208
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 152 bits (369), Expect = 2e-35
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 3/211 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF+S+GL L+ + G+E+P+ IQ+ ++ P+++G+D++ A +GTGKTA FS+ +LQ
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 426 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
+ L+L PTRELA Q+ + I G + + GG + + +R L
Sbjct: 97 RITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKR 156
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G VV TPGR D ++R+ L+ ++++VLDEADEML+ GF E + + P Q
Sbjct: 157 GVDVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAEDLEAILSSTPEKRQTA 216
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDEL 869
L SATLP I + + + +P+R+ + R+++
Sbjct: 217 LFSATLPPRIASIAERHLREPVRVRIAREKV 247
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 152 bits (369), Expect = 2e-35
Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 1/215 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+ +GL + +L + + G+E PS IQ++ I ++ +D+I QAQ+GTGKTA F + +L
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYGQH 605
++ + Q+LIL+PTRELA Q+ + + M GG + +R L G H
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+ GTPGRV D I ++ L+ ++K VLDEADEML GF + I + + +P Q+ L S
Sbjct: 134 AIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRIPEQRQIALFS 193
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
AT+P+ I ++ +F+ P I +K T I Q
Sbjct: 194 ATMPNVIKKIAKQFLNQPKIIKIKTKTETATTITQ 228
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 152 bits (369), Expect = 2e-35
Identities = 83/225 (36%), Positives = 127/225 (56%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+ LR+EL+ I G+ +P+ +Q +I + G D++ ++++G+GKTA + I I+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+ + LIL PTRELA Q+ KV ALG ++ GG ++ + I + G ++
Sbjct: 64 TAKE-KGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
+ GTPGR D+I R +L + VLDEADEML+ GF E I + LP Q L SA
Sbjct: 123 IVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLFSA 182
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
T+P EI+E+ FM + + + +DE+T+ GI AV R E K
Sbjct: 183 TIPSEIIELAKGFMHNEEILFLSKDEVTVNGI-DHNYAVSRRERK 226
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 152 bits (369), Expect = 2e-35
Identities = 86/222 (38%), Positives = 126/222 (56%), Gaps = 4/222 (1%)
Frame = +3
Query: 264 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 443
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ L+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 444 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVSG 617
+ VL++ TRELA QI K +M NV+ GG ++ +D L H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 618 TPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATL 794
TPGR+ + R + L + IK +LDE D+ML + + + +++R P QV++ SATL
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 795 PHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFXVAVEREE 917
EI + KFM DP+ I V + +LTL G++Q+ V ++ E
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE 273
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 152 bits (368), Expect = 2e-35
Identities = 83/217 (38%), Positives = 119/217 (54%), Gaps = 1/217 (0%)
Frame = +3
Query: 243 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 422
P F + L + LLR + G+E PS IQ +I ++ RDV+ QAQ+GTGKTA+F++ IL
Sbjct: 7 PLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPIL 66
Query: 423 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG 599
+D Q L+L+PTRELA Q+ + ++ GG + G + L G
Sbjct: 67 ARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRG 126
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
HVV GTPGRV D + + L IK +VLDEADEML GF + + + + P + Q L
Sbjct: 127 VHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQTAL 186
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
SAT+P I + + ++ DP I V T + I+Q
Sbjct: 187 FSATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQ 223
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 152 bits (368), Expect = 2e-35
Identities = 81/223 (36%), Positives = 133/223 (59%), Gaps = 1/223 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL+ +L IYT G++KP+ IQ +S+ I++G+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 605
L ++ QVLIL+P REL QI + + LG + N + GG L ++K +G
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKL-SGVKKSLHGAQ 125
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
V+S TPGR+ D+ + +L + I MLV+DEAD + + GF+E + + + LP + Q VL S
Sbjct: 126 VISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFDMGFREAVTSILKDLPKSVQTVLCS 185
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
AT +I + + P+ I + + + E ++++ V+V E
Sbjct: 186 ATFTDDIKNFSKTLLKKPVIIEDRSNIGSEENLEEWAVSVYPE 228
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 151 bits (367), Expect = 3e-35
Identities = 86/242 (35%), Positives = 135/242 (55%), Gaps = 9/242 (3%)
Frame = +3
Query: 189 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 347
S+ LS+VE DT E V F SMGL + +G+ G++ P+ IQ+++I I
Sbjct: 12 SDYLSDVEPDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVI 71
Query: 348 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIQKVILALG 521
+ G+DV+A A++G+GKTA F I + + L +T + LILSPTRELA Q K LG
Sbjct: 72 LDGKDVVAMARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELG 131
Query: 522 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEAD 701
F ++ +GG ++ + L ++ GTPGR+ +I+ L+ ++++ +V DEAD
Sbjct: 132 KFTKLKTALILGGDSMDDQFAALHENPDIIIGTPGRLMHVIKEMNLKLQNVEYVVFDEAD 191
Query: 702 EMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEG 881
+ GF EQ+ ++ R P Q +L SATLP I+E +T+P+ I + D +
Sbjct: 192 RLFEMGFAEQLQEIIRRFPETRQTLLFSATLPKVIVEFARAGLTEPVLIRLDVDSKLSDQ 251
Query: 882 IK 887
IK
Sbjct: 252 IK 253
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 151 bits (367), Expect = 3e-35
Identities = 82/229 (35%), Positives = 133/229 (58%), Gaps = 6/229 (2%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+FDS+GL ++LR + G+ +P+ IQQ++I +++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 426 TLDTTL------RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 587
L T R + LIL+PTRELA QI + + ++N++ GG ++ + K
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 588 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 767
L G V+ TPGR+ D+ + ++ +++LVLDEAD ML+ GF I V LP
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181
Query: 768 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
Q +L SAT +I + K + +P+ I V R + + Q V+++
Sbjct: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK 230
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 151 bits (367), Expect = 3e-35
Identities = 85/221 (38%), Positives = 133/221 (60%), Gaps = 6/221 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQ 425
F S+ L +L G+ GF++PS IQ ++I P+ + G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAI-PLGRCGLDLIVQAKSGTGKTCVFTTIALD 86
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 602
+L TQVL+L+PTRE+A QI V++A+G M ++CH IGG + +D + L
Sbjct: 87 SLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLK-KC 145
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEML----NKGFKEQIYDVYRYLPPATQ 770
H+ G+PGR+ +I L SI++ VLDEAD++L + F+EQI +Y LP Q
Sbjct: 146 HIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQ 205
Query: 771 VVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQF 893
++ +SAT P + + S++M +P + + + L G+KQ+
Sbjct: 206 MLALSATYPESLAQQLSRYMREPTFVRLNPTDPGLLGLKQY 246
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 151 bits (366), Expect = 4e-35
Identities = 82/214 (38%), Positives = 124/214 (57%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL LL+ + GFE P+ IQ+ +I I++G +++ QA +GTGKTA + + +LQ
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+ ++ QVLI++PTRELA Q+ + LG ++ V+ A GG + IR L G V
Sbjct: 64 IQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
+ GTPGR+ D I R+ IK+++LDEADEML+ GF + I + L Q +L SA
Sbjct: 123 IVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSA 182
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
TLP I + KF+ + + E T+ I+Q
Sbjct: 183 TLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQ 216
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 151 bits (366), Expect = 4e-35
Identities = 84/239 (35%), Positives = 141/239 (58%), Gaps = 3/239 (1%)
Frame = +3
Query: 216 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTG 392
D + + + TF+ +GL+ ELL+G+Y G+ KPS IQ+ ++ I++ ++IAQ+QSGTG
Sbjct: 61 DPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTG 120
Query: 393 KTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLG 572
KTA F++ +L +D ++ Q + +SPT+ELA Q +VI +G F N++ I +
Sbjct: 121 KTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVP 180
Query: 573 EDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLN-KGFKEQIYDVYR 749
+++ V+ GTPG++ + + ++ L + +KM+VLDEAD ++ K QI + R
Sbjct: 181 KNVT-----NQVIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINR 235
Query: 750 YLPPATQVVLISATLPHEILEMTSKFMTDP-IRILVKRDELTLEGIKQFXVAVEREEWK 923
LP +V L SAT + E+ K + DP I +KR EL++E I Q+ + E+ K
Sbjct: 236 LLPSNVKVCLFSATFSMGVEELIKKIVQDPYTSIRLKRQELSVEKIHQYFIDCGSEDNK 294
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 151 bits (365), Expect = 5e-35
Identities = 79/218 (36%), Positives = 128/218 (58%), Gaps = 1/218 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+++ L L R I G+ + IQ+++I + +D+I ++ +GTGKT F + ILQ
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYGQH 605
L+T L++ Q +IL PT ELA+QI + + ++ V GG+++ I L +
Sbjct: 63 LNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYALRKS-N 121
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ GTPGR+ D I R+ LR IK +VLDEADEML GFK + V++ P Q +L S
Sbjct: 122 IIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLLFS 181
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXV 899
AT+P ++LE+ + + T+P+ I+V ++ + I Q V
Sbjct: 182 ATMPKQVLEIANNYQTNPVEIVVTKNVIEQNNISQHYV 219
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 150 bits (364), Expect = 7e-35
Identities = 84/233 (36%), Positives = 126/233 (54%), Gaps = 5/233 (2%)
Frame = +3
Query: 225 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 404
E ++ +F GL + + R + + P+ IQ ++I + GRDV+ AQ+GTGKTA+
Sbjct: 10 ERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTAS 69
Query: 405 FSISILQTL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 569
F++ IL L + T+VL+LSPTREL+ QI A G + + IGG +
Sbjct: 70 FALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPM 129
Query: 570 GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 749
G +R L G V+ TPGR+ D+++ L+ S++ LVLDEAD ML+ GF I +
Sbjct: 130 GRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVA 189
Query: 750 YLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
LP Q + SAT+P +I E+ + DP R+ V T E I Q + V+
Sbjct: 190 KLPIKRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAERINQRILQVD 242
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 150 bits (364), Expect = 7e-35
Identities = 73/207 (35%), Positives = 125/207 (60%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF+ L +++L+ + + G+ PS +Q+ I ++KG++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
++ Q LI+ PTRELA Q++ I +G V+C A G ++ + I +L H
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V TPGR+ D I R ++ ++K LV+DEAD+M NKGF EQ+ + LP V L S
Sbjct: 124 IVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLPKEKIVSLFS 183
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDE 866
AT+ EI + K+M D I ++ +E
Sbjct: 184 ATIDEEIKYICEKYMLDYSVINIEENE 210
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 150 bits (364), Expect = 7e-35
Identities = 84/238 (35%), Positives = 129/238 (54%), Gaps = 5/238 (2%)
Frame = +3
Query: 225 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 404
++ V+ F ++GL + LLR I +E P+ IQ RSI +++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 405 FSISILQTLDTTL-----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 569
F + IL + R + L+L+PTRELATQI G F IGG
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKP 170
Query: 570 GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 749
G R+++ G ++ TPGR+ D + V+R +++ +VLDEAD+ML+ GF I +
Sbjct: 171 GPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMA 230
Query: 750 YLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
LP Q V+ SAT+P I + +F+ DP + V + ++ I Q + + EE K
Sbjct: 231 KLPRQRQAVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQVLLLAPEEKK 288
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 150 bits (363), Expect = 9e-35
Identities = 80/225 (35%), Positives = 127/225 (56%), Gaps = 3/225 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF +GL +L+ + G+EKPS IQ+++I P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 426 TLDTTL---RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
L + R + LIL+PTRELA QIQ+ A G + ++ GG + KL
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKK 121
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G ++ TPGR+ D+ + + +++ VLDEAD ML+ GF + V + LP Q +
Sbjct: 122 GVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTL 181
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
SAT+P E++++ + + +P+++ V +E I Q V++
Sbjct: 182 FFSATMPPEVMDLVNGLLKNPVKVAVDPVSSPVEIIDQSVYLVDK 226
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 149 bits (362), Expect = 1e-34
Identities = 85/217 (39%), Positives = 123/217 (56%), Gaps = 2/217 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F ++ L L GI G+ + +Q +S+ PI++G DVIAQA +G+GKTA F + +LQ
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLD-YGQ 602
LD L Q L+L PTRELA Q+ K + L N++ GG LG + L+ +
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDP 147
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
HVV GTPGR+ ++ R+R L ++ LVLDEAD ML+ GF+E I ++ Q +L
Sbjct: 148 HVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQSLLF 207
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQF 893
SAT P I + + + DPI I V+ + E +QF
Sbjct: 208 SATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQF 244
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 149 bits (362), Expect = 1e-34
Identities = 81/228 (35%), Positives = 125/228 (54%), Gaps = 2/228 (0%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSIS 416
+ F+ +GL LL G+ GFE P+ IQQ+SI ++K D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 417 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLD 593
+L +D RE Q LIL+PTRELA QI + + + + GG N+ IR +
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIR 131
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G ++ TPGR+ D+++RR ++ ++K +VLDEADEMLN GFKE I + +
Sbjct: 132 RGAQIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKEDIDFILSKSDTGRNI 191
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
L SAT+ EI + +M P + + + + I+ + ++ +
Sbjct: 192 WLFSATMAREIKRIVDTYMVQPEEVRINPKNIVNKNIEHQSIQLKASD 239
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 149 bits (362), Expect = 1e-34
Identities = 79/224 (35%), Positives = 130/224 (58%), Gaps = 3/224 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 422
TF +GL LL+ + PS IQQ++I I+ ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 423 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG 599
Q ++ +L++TQVL+L PTREL Q+ K + ++ + A GG + E I+KL+
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETP 121
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
+H++ TPGR+ D+I R+ + ++K L+LDEADEMLN GF I + + P + +L
Sbjct: 122 KHILVATPGRLLDLIARKAVNLSNLKYLILDEADEMLNMGFLPDIDKIMKIAKPTARKLL 181
Query: 780 ISATLPHEILEMTSKFM-TDPIRILVKRDELTLEGIKQFXVAVE 908
++TL E+ + +++ TD I +K E I+ +A +
Sbjct: 182 FTSTLGSELKLIIREYLGTDIEEIRIKPQEYVNRNIEHQYLAYQ 225
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 149 bits (362), Expect = 1e-34
Identities = 81/223 (36%), Positives = 128/223 (57%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+ +G++ +L + GFEK IQ+ +I ++ GRDV+ QA +GTGKT +SIS+LQ
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+ Q LI++PTRELA QI + + + V+ A GG ++G + L G +
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
+ TPGR+ D I+R + + LVLDEAD ML+ GF + I + P + L SA
Sbjct: 123 LVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFIDDIQFILDLTPDEKVMSLFSA 182
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
T+P EIL ++ +++ +P + L+ D+L+ EGI Q + + E
Sbjct: 183 TMPIEILRLSEEYLKNPKQFLLDADDLSGEGIDQSYLVIRDRE 225
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 149 bits (361), Expect = 2e-34
Identities = 80/220 (36%), Positives = 131/220 (59%), Gaps = 3/220 (1%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 419
+ F +G+ + + G + + IQ+++I I+ G+D+I QA++GTGKT F + I
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 420 LQTLDTTLRETQVLILSPTRELATQIQ---KVILALGDFMNVQCHACIGGTNLGEDIRKL 590
L+ +D + Q LI++PTRELA QI K +L + +NV A GG ++ + +RKL
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVL--AIYGGQDVAQQLRKL 121
Query: 591 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
H+V TPGR+ D IRR + ++ +VLDEAD+ML GF I D+ P + Q
Sbjct: 122 KGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQ 181
Query: 771 VVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
+L SAT+P +I ++ ++M +P I V+ +E+T++ I+Q
Sbjct: 182 TMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQ 221
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 149 bits (361), Expect = 2e-34
Identities = 76/224 (33%), Positives = 125/224 (55%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F + L E+ R + G+E P+ +Q I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
++ + Q L+L+PTRELA Q+++ I +G F ++ A G + +L H
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTH 124
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V GTPGRV D I + L +K LV+DEADEMLN GF +Q+ + LP +L S
Sbjct: 125 IVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFS 184
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
ATLP ++ ++ +M P I +K +T + I+ V EE
Sbjct: 185 ATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEE 228
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 149 bits (361), Expect = 2e-34
Identities = 78/207 (37%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F S+ L E L + G+ + + +Q ++ ++ G DV A+A++G+GKTA F I +L
Sbjct: 5 SFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLD 64
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQ 602
+ + TQ L+L PTRELA Q+ K + L F N++ GG +G+ + L +
Sbjct: 65 RIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVHAP 124
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
H+V GTPGR+ D +R++ L S+K+LVLDEAD ML+ GF + I DV Y P Q +L
Sbjct: 125 HIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLLF 184
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRD 863
SAT P EI +++++ P R + D
Sbjct: 185 SATYPQEIEQISARVQRQPQRFEIADD 211
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 149 bits (360), Expect = 2e-34
Identities = 79/212 (37%), Positives = 131/212 (61%), Gaps = 1/212 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+ L+ ELL GI+ G+E PS+IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYGQH 605
LD Q +++ PTRELA Q+ ++ + + M + A GGTNL +D+ +LD H
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGH 202
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
VV TPGR+ D+I++ + + ++M+VLDEAD++L++ F + + LP Q++L S
Sbjct: 203 VVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLLSQDFVQIMEAFILTLPKNRQILLYS 262
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEG 881
AT P + + + + P I + +ELTL+G
Sbjct: 263 ATFPLSVQKFMNSHLQKPYEINL-MEELTLKG 293
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 149 bits (360), Expect = 2e-34
Identities = 85/235 (36%), Positives = 126/235 (53%), Gaps = 3/235 (1%)
Frame = +3
Query: 222 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 401
+EDV P F +GL + ++R I G+E P+ IQ ++I ++KG DV+ AQ+GTGKTA
Sbjct: 284 AEDVSDRPRFADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTA 343
Query: 402 TFSISILQTLDTT---LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLG 572
+F++ +LQ L + R + LIL PTRELA Q+ + G ++ + IGG ++
Sbjct: 344 SFTLPMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMA 403
Query: 573 EDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRY 752
E L+ G V+ TPGR+ D+ R L LV+DEAD ML+ GF I +
Sbjct: 404 EQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVAL 463
Query: 753 LPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
LP Q + SAT+ EI + F+ P+ I V R I++ V V +E
Sbjct: 464 LPAHRQTLFFSATMAPEIRRLADAFLRHPVEITVSRQSSVATTIEEALVIVPEDE 518
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 149 bits (360), Expect = 2e-34
Identities = 77/223 (34%), Positives = 125/223 (56%), Gaps = 3/223 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 419
TF + ++++G+ GF + +Q++ I+PIV R D++ AQ+GTGKTA F I +
Sbjct: 3 TFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGIPL 61
Query: 420 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDY 596
+Q DT L+ TQ L+L PTREL Q+ + +G ++ ++ GG ++ +L
Sbjct: 62 IQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGASIVSQTEELRK 121
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G VV TPGR+ D+IRR + + +VLDEADEML GF++++ + P + +
Sbjct: 122 GAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQDELNAILAVTPDSKNTL 181
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
L SAT+P E+ + + +M DP+ I+V R E + V
Sbjct: 182 LFSATMPREVAAIAANYMKDPLEIIVGRRNAGAENVDHIYYVV 224
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 149 bits (360), Expect = 2e-34
Identities = 75/228 (32%), Positives = 131/228 (57%), Gaps = 4/228 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 426 TLDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L + + + L+L+PTRELA Q+ + + G ++ ++ GG + I+KL
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
+G V+ TPGR+ D++++ V++ +++LVLDEAD ML+ GF I + LP Q
Sbjct: 122 HGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
++ SAT EI E+ + P+ I V +KQ+ V++ +
Sbjct: 182 LMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQ 229
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 149 bits (360), Expect = 2e-34
Identities = 77/197 (39%), Positives = 114/197 (57%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F + ++ R + GFE + IQ ++ + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
L+ R Q LI+ PTREL Q+ + I +G +M V+ A GG ++G I +L G HV
Sbjct: 66 LEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHV 124
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
+ TPGR+ D I R + I +VLDEADEMLN GF + I + ++P Q +L SA
Sbjct: 125 IVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTMLFSA 184
Query: 789 TLPHEILEMTSKFMTDP 839
T+ IL + K+M +P
Sbjct: 185 TVSKPILRIARKYMRNP 201
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 148 bits (359), Expect = 3e-34
Identities = 82/225 (36%), Positives = 125/225 (55%), Gaps = 2/225 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
+ M L E+ + + +PS IQ I ++GRDV+ QA++GTGKTA F I I++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 429 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L+ R Q LIL+PTRELA Q++ I L + A GG L + KL
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAP 125
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
H+V GTPGRV D++ RR L+ ++ +VLDEAD ML+ GF+ I + R P Q +L+
Sbjct: 126 HIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLL 185
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
SAT+P I ++ ++M +P ++ ++ E I+Q V+ +
Sbjct: 186 SATVPPTIEKLAQRYMRNPEKVDFSPTNISAETIEQRYFTVDHSK 230
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA helicase
40; n=2; core eudicotyledons|Rep: Probable DEAD-box
ATP-dependent RNA helicase 40 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1088
Score = 148 bits (359), Expect = 3e-34
Identities = 81/230 (35%), Positives = 134/230 (58%), Gaps = 6/230 (2%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF+S GL E+LR + + GF P+ IQ ++ ++ RD++A A++G+GKT + I
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495
Query: 426 TLDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L +++ VLIL+PTRELATQIQ L G + C GG G +++L+
Sbjct: 496 LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELE 555
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G +V TPGR+ D++ +++ + + +LVLDEAD ML+ GF+ QI + +PP Q
Sbjct: 556 RGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQT 615
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKR-DELTL-EGIKQFXVAVEREE 917
++ +AT P E+ ++ S + +P+++ + R DEL + I Q+ V + E
Sbjct: 616 LMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQME 665
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 148 bits (358), Expect = 4e-34
Identities = 81/224 (36%), Positives = 126/224 (56%), Gaps = 1/224 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +G+ D ++ + + GF++P+ IQ+ SI ++G D++ QAQ+GTGKT F I +++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+ + Q LIL+PTRELA Q+ + + VQ GG + I+ L G +
Sbjct: 64 V-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQI 122
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA-TQVVLIS 785
V GTPGRV D + RR L+T I L+LDEADEM+N GF + + + +P Q +L S
Sbjct: 123 VVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFS 182
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
AT+P I + +FM P I +E++ I++F V+ E
Sbjct: 183 ATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELE 226
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 147 bits (357), Expect = 5e-34
Identities = 79/232 (34%), Positives = 133/232 (57%), Gaps = 9/232 (3%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSIS 416
+ F+S GL ++ + GF P+ IQ++++ ++ G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 417 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
+++ +D+T+++TQ L+LSPTRELA Q+ + + LG V+ GG + I +
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKR 162
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP----- 761
G H+V TPGR+ D + +++++ +S+K +VLDEADEML+ GFKE + + P
Sbjct: 163 GAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEMLSMGFKEALETILSATQPDDSDS 222
Query: 762 ---ATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
A + L SAT+ E+ +TS ++ +P + V + T + I+Q V+
Sbjct: 223 VRAACRTWLFSATMSSEVRRLTSTYLENPETVSVNKVGGTADTIEQVYYTVK 274
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 147 bits (357), Expect = 5e-34
Identities = 78/228 (34%), Positives = 133/228 (58%), Gaps = 6/228 (2%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F S+GL D + + G+++P+AIQ ++I ++KG D+IA A++G+GKTA F + +L+
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLE 61
Query: 426 TLDTTLRE----TQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRK 587
L + T L+L PTRELA Q+ + + + ++ A GG + ++
Sbjct: 62 KLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQS 121
Query: 588 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 767
L G +V TPGR+ D++R+ L R +K LVLDEAD ML+ GF +++ D+ P
Sbjct: 122 LSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGNV 181
Query: 768 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
Q +L SAT P ++ E+T + + +P+ I VK++ + + Q + V+R
Sbjct: 182 QTLLFSATFPDKVKELTEELLRNPVEISVKQEATLPDQLHQRAIEVDR 229
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 147 bits (356), Expect = 6e-34
Identities = 82/222 (36%), Positives = 126/222 (56%), Gaps = 4/222 (1%)
Frame = +3
Query: 264 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 443
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 444 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVSG 617
+ VL++ TRELA QI K +M +V+ GG ++ +D L HVV G
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 170
Query: 618 TPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATL 794
TPGR+ ++R R +++K VLDE D+ML + + + +++R P Q ++ SATL
Sbjct: 171 TPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 230
Query: 795 PHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFXVAVEREE 917
+I + KFM DP+ + V + +LTL G++Q+ V ++ E
Sbjct: 231 SKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE 272
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 147 bits (356), Expect = 6e-34
Identities = 90/231 (38%), Positives = 130/231 (56%), Gaps = 6/231 (2%)
Frame = +3
Query: 216 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 386
DT + I +F +GL ++ G+ F+KPS IQ R+ LP++ R++IAQ+QSG
Sbjct: 87 DTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARA-LPLMLSNPPRNMIAQSQSG 145
Query: 387 TGKTATFSISILQTLDTTL-RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 563
TGKT F ++IL +D + Q L L+P+RELA QIQ VI ++G F C +
Sbjct: 146 TGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQF----CTGLVVDA 201
Query: 564 NL-GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLN-KGFKEQIY 737
+ G R+ +VV GTPG V D+IRRR +K+LV+DEAD ML+ +G EQ
Sbjct: 202 AIPGAISRETGVKANVVVGTPGTVMDLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCV 261
Query: 738 DVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
V LP Q +L SAT P + KF ++ +++ ELT++GI Q
Sbjct: 262 RVKNMLPKTIQTLLFSATFPDHVKSYAEKFAPQANQMKLRQQELTVKGISQ 312
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 147 bits (355), Expect = 8e-34
Identities = 83/231 (35%), Positives = 128/231 (55%), Gaps = 5/231 (2%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TFD GL + L R + P+ IQ+R+I + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 426 TLDT-----TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 590
L T T R T+ LILSPTRELA QI + I L + + GG ++ I+ L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 591 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
G ++ TPGR+ D++ +R + R + L+LDEAD ML+ GF + + P Q
Sbjct: 125 ARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDRQ 184
Query: 771 VVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
++ SAT+P I +++ K +T+P ++ V +T+E I Q +V + K
Sbjct: 185 SMMFSATMPKPIEDLSKKILTNPQKVSVTPAVVTVEKIAQSVFSVPQRAKK 235
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 146 bits (354), Expect = 1e-33
Identities = 79/221 (35%), Positives = 120/221 (54%), Gaps = 1/221 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F + L E+ I GFE+ S IQ +I I+KG+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 605
L+ + Q LIL PTREL Q+ + L + N + GG + +R L
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQ 130
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V TPGR+ D +RR + IK++VLDEADEML+ GF+E + + + P Q ++ S
Sbjct: 131 IVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIMFS 190
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
AT+ ++L + KF P I V +L+ I+Q ++
Sbjct: 191 ATMTDDVLTLMKKFQNHPQIIDVTHQKLSAPKIEQIYYEIQ 231
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 146 bits (354), Expect = 1e-33
Identities = 82/210 (39%), Positives = 124/210 (59%), Gaps = 1/210 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F ++ L ELL + GFE + IQQ SI ++ G+D+I QA++G+GKTA FS+ IL
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 605
++ Q LIL PTRELA+Q+ I LG + ++ A GG + E L+ G
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQ 168
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V GTPGR+ D + R + ++K +VLDEAD+ML+ GF ++I V R LP + Q VL S
Sbjct: 169 IVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQTVLFS 228
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTL 875
AT P I ++ K+ +++++ +E L
Sbjct: 229 ATFPESIEHLSRKYQRHAQQVIIEDEEQNL 258
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 146 bits (354), Expect = 1e-33
Identities = 79/227 (34%), Positives = 137/227 (60%), Gaps = 6/227 (2%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F ++GL +L+ + + P IQ+++I I+KG+D++ AQ+G+GKTA+F + ILQ
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 426 TLDTTL----RETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRK 587
L T R L+L PTRELA Q+ +V A + + ++ A GG ++ + +
Sbjct: 70 MLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMIQ 129
Query: 588 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 767
L G ++ TPGR+ D++ + + +++LVLDEAD+MLN GFKE++ ++++ LP
Sbjct: 130 LQ-GVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKR 188
Query: 768 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
Q +L SATL ++ +T + DP++I + +E ++ I+Q AVE
Sbjct: 189 QNLLFSATLGKDVDTITEFLLHDPVKIEIIAEEQNIDLIQQIAYAVE 235
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 146 bits (354), Expect = 1e-33
Identities = 74/228 (32%), Positives = 130/228 (57%), Gaps = 4/228 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 426 TLDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L + + + L+L+PTRELA Q+ + + G ++ ++ GG + I+KL
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
+G V+ TPGR+ D+ +++ ++ +++LVLDEAD ML+ GF I + LP Q
Sbjct: 122 HGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQN 181
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
++ SAT EI E+ + P+ I V +KQ+ V++ +
Sbjct: 182 LMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQ 229
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 146 bits (353), Expect = 1e-33
Identities = 75/228 (32%), Positives = 135/228 (59%), Gaps = 7/228 (3%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F+ + D L R + F + + IQ ++I I +G+D++A++Q+GTGKT FS +++
Sbjct: 2 SFEQLNFPDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLAESQTGTGKTLAFSFPLIE 61
Query: 426 TLDTTLRETQV-----LILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIR 584
++T + + L+L PTRELA Q++K +F ++ IGG N+ IR
Sbjct: 62 RINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYAEFSLRPIKTATLIGGENIDGQIR 121
Query: 585 KLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 764
KL G V+ TPGR+ ++I +R ++ML+LDEAD+ML+ GF +++ ++ LP
Sbjct: 122 KLRMGLDVLIATPGRIIELINLGEVRLVELEMLILDEADKMLDLGFADELKELLEALPKK 181
Query: 765 TQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
Q +L SATLP ++ ++ +F+ + + + RD++T + I+Q + V+
Sbjct: 182 RQNLLFSATLPQKVQQLAEEFLNAAVELRISRDQITGDNIEQRVIEVD 229
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 146 bits (353), Expect = 1e-33
Identities = 85/223 (38%), Positives = 126/223 (56%), Gaps = 5/223 (2%)
Frame = +3
Query: 264 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 443
L+ E+LR I GFE PS +Q I V G D++ QA+SG GKTA F ++ LQ L+ +
Sbjct: 48 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSD 107
Query: 444 RET-QVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVS 614
T VL++ TRELA QI K +M V+ GG + +D L G H+V
Sbjct: 108 NNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVV 167
Query: 615 GTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISAT 791
GTPGR+ +IR + L + +K VLDE D+ML + + + +++R P QV++ SAT
Sbjct: 168 GTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSAT 227
Query: 792 LPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFXVAVEREE 917
L +I + KFM DP+ + V + +LTL G++Q V ++ E
Sbjct: 228 LSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENE 270
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 145 bits (352), Expect = 2e-33
Identities = 77/229 (33%), Positives = 129/229 (56%), Gaps = 5/229 (2%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F+ L+ +LLR + GFE+PS +Q + I + G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ- 602
L + L+L TRELA QI+ LG F N + A GG DI L +
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKKP 158
Query: 603 HVVSGTPGRVFDMIRRR--VLRTRSIKMLVLDEADEMLNKG-FKEQIYDVYRYLPPATQV 773
H++ TPGR +I+ + V+ T++I+ ++DE D +L+ + + +++ LP QV
Sbjct: 159 HILVATPGRCLSLIKAKPSVIETQNIEYFIIDECDRVLSSNKMRSDVQNIFYELPRKKQV 218
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVK-RDELTLEGIKQFXVAVEREE 917
++ S T+ E + KF+ D I I V+ +L L G++Q+ + +E ++
Sbjct: 219 MMFSGTMSDESKKTCRKFLQDQIEIFVEDNSKLVLHGLEQYHIKIEEKQ 267
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 145 bits (352), Expect = 2e-33
Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 3/211 (1%)
Frame = +3
Query: 231 VEVIP---TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 401
VE+ P F +GL D L + G+ +P+ IQ +++ ++ GRDV AQ+GTGKTA
Sbjct: 126 VEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTA 185
Query: 402 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 581
F++ IL L R + L+L PTRELA Q+++ + ++ GG G+
Sbjct: 186 AFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQR 245
Query: 582 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 761
L G VV+ TPGR+ D I + + +++LVLDE D ML+ GF + + + P
Sbjct: 246 EDLQRGVDVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLDMGFLPDVKRIVQQCPQ 305
Query: 762 ATQVVLISATLPHEILEMTSKFMTDPIRILV 854
A Q + SATLP E+ ++ S + DP+ I +
Sbjct: 306 ARQTLFFSATLPPELAQLASWALRDPVEIKI 336
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 145 bits (352), Expect = 2e-33
Identities = 76/227 (33%), Positives = 131/227 (57%), Gaps = 4/227 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F+ +GL +L+ I G+ +PSAIQ ++I I++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 426 TL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L + + + L+L+PTRELA Q+ + + G ++++ GG + + L
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALR 125
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G ++ TPGR+ D+ ++ +R +++LVLDEAD ML+ GF I + LP Q
Sbjct: 126 RGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKRQN 185
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
+L SAT EI ++ + +PI I V T ++Q+ V+++
Sbjct: 186 LLFSATFSPEIRQLAKGLVNNPIEISVTPRNATAVSVEQWLHPVDKK 232
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 145 bits (352), Expect = 2e-33
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 1/201 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F S+ L ++L++ + + G+E+ + IQ+ S+ I+ G+D+IAQA++GTGKTA F + +L
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 605
L QVLIL PTREL Q+ K I L M N++ + GG ++ + +G H
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V GTPGR+ + + L ++ LVLDEAD ML+ GF+++I + Q +L S
Sbjct: 126 IVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEIDAIIDQTNKQRQTLLFS 185
Query: 786 ATLPHEILEMTSKFMTDPIRI 848
AT P +I + + M DP+RI
Sbjct: 186 ATYPKKIATIAKRVMKDPLRI 206
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 145 bits (352), Expect = 2e-33
Identities = 81/218 (37%), Positives = 123/218 (56%), Gaps = 4/218 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQ 425
F MGL D +L I G+E P+ IQ++ I ++ G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
LD + Q L+L+PTRELA Q+ I +L + GG ++G IR L
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVD 123
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V GTPGR+ D + R L IK LV+DEADEML+ GF E + + Q+++ S
Sbjct: 124 LVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKEKQILMFS 183
Query: 786 ATLPHEILEMTSKFMTD---PIRILVKRDELTLEGIKQ 890
AT+P I+ + K M + + ++++T++ KQ
Sbjct: 184 ATMPQRIVTLARKHMGNFETVTTVQENKEDITVKKAKQ 221
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 145 bits (351), Expect = 3e-33
Identities = 79/225 (35%), Positives = 129/225 (57%), Gaps = 8/225 (3%)
Frame = +3
Query: 258 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL-- 431
+G+ E+++ + + G EK IQ+ + P ++GRD+I +A++GTGKT F I I+ +
Sbjct: 109 LGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 168
Query: 432 ----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 599
R L+L+PTRELA Q++K ++ C GGT +G+ +R+LDYG
Sbjct: 169 YNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDYG 226
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
V GTPGRV D+++R L ++ +VLDEAD+ML GF E + + LP Q ++
Sbjct: 227 VDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMM 286
Query: 780 ISATLPHEILEMTSKFMTDPIRI-LV-KRDELTLEGIKQFXVAVE 908
SAT+P I +T K++ +P+ + LV D+ +GI + + +
Sbjct: 287 FSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIAD 331
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 144 bits (350), Expect = 3e-33
Identities = 80/228 (35%), Positives = 119/228 (52%), Gaps = 3/228 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL L+ + G+ + IQ +I + G+DV+ AQ+GTGKTA F++ ++
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 429 L---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 599
L R + L+++PTRELA Q+ + IGG + G+ +KLD G
Sbjct: 64 LMNGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDRG 123
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
V+ TPGR+ D R L ++ LV+DEAD ML+ GF I +++ PP Q +
Sbjct: 124 VDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQTLF 183
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
SAT+P EI +T +F+ DP+RI R T E I Q V V + K
Sbjct: 184 FSATMPPEITRLTKQFLKDPVRIEASRPATTNENITQLMVKVPSSDPK 231
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 144 bits (350), Expect = 3e-33
Identities = 73/204 (35%), Positives = 122/204 (59%), Gaps = 1/204 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F+S ++ G+ G+++P+ IQ ++I PI+ G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 426 TLDTTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
+ +T R + L+++PTRELA QI +LG ++ + GG N+ + IR+L G
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
VV PGR+ D I R + ++ L++DEAD M + GF+ I + + L Q +L
Sbjct: 122 DVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLF 181
Query: 783 SATLPHEILEMTSKFMTDPIRILV 854
SAT+P E+ ++T + T+P+ + V
Sbjct: 182 SATMPPEVRKLTLETQTNPVTVQV 205
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 144 bits (350), Expect = 3e-33
Identities = 83/230 (36%), Positives = 130/230 (56%), Gaps = 7/230 (3%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F + + E+ +GI GF + + IQ++++ + G+DV QAQ+GTGKTATF ISI
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 429 LDTTLR-----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L + + + LIL+PTREL QI+K ALG + A GG + + L
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALK 122
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP--AT 767
G +V GTPGR+ D ++++V + ++ LV+DEAD M + GF + + R LPP
Sbjct: 123 AGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPPYDKR 182
Query: 768 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
Q +L SATL ++E+ +FM P ++ V +++T E ++Q V R+E
Sbjct: 183 QNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKE 232
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 144 bits (350), Expect = 3e-33
Identities = 76/207 (36%), Positives = 120/207 (57%), Gaps = 5/207 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
FD +GL L+ G+ P+ IQ R+I + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 429 L-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L R + LIL+PTREL +QI + + A + +++ +GG +G I++ +
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAE 192
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G ++ TPGR+ D++ R+ LR + LVLDEAD+ML+ GF + + LP Q
Sbjct: 193 RGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQT 252
Query: 774 VLISATLPHEILEMTSKFMTDPIRILV 854
+L SAT+P ++ E++ ++TDP R+ V
Sbjct: 253 MLFSATMPKQMEELSRAYLTDPARVEV 279
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 144 bits (349), Expect = 5e-33
Identities = 76/215 (35%), Positives = 121/215 (56%), Gaps = 1/215 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F + L +L + GF P+ IQ +I +++GRD + +AQ+GTGKTA FS+ +L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQH 605
L+ + + Q ++++PTRELA Q+ I LG + ++ GG ++ + +R L G H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V GTPGRV D+I R L +LDEADEML GF + + + P + Q VL S
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
AT+P + E+ +F+ +P + V T+ ++Q
Sbjct: 208 ATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQ 242
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 144 bits (349), Expect = 5e-33
Identities = 74/215 (34%), Positives = 120/215 (55%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F L+ +L+ + GF +P+ IQ+++I ++ G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+D + + Q L+L+PTRELA Q+ + GG++ + L G
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGAR 175
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
VV GTPGR+ D+IR+ L+ +K LVLDEADEML+ GF + I + P Q +L S
Sbjct: 176 VVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTMLFS 235
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
ATL ++ + ++++ P I + ++ I+Q
Sbjct: 236 ATLSSRVMSIANRYLHSPESISISPKQMIGSSIEQ 270
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 144 bits (348), Expect = 6e-33
Identities = 78/202 (38%), Positives = 116/202 (57%), Gaps = 2/202 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F SMGL EL++GI G++ P+ IQ+++I I++GRDV+A A++G+GKTA F I + +
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 429 LDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L + + LILSPTRELA Q K I LG FM ++ +GG ++ +
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
V+ TPGR + L+ SI+ +V DEAD + GF EQ+ + LP + Q V+
Sbjct: 161 DVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMF 220
Query: 783 SATLPHEILEMTSKFMTDPIRI 848
SATLP ++E + DP+ I
Sbjct: 221 SATLPKLLVEFARAGLNDPVLI 242
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 144 bits (348), Expect = 6e-33
Identities = 86/242 (35%), Positives = 140/242 (57%), Gaps = 6/242 (2%)
Frame = +3
Query: 216 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 386
D S + + TF+ + L++ELL+GIY GF +PS IQ+ + LP++ +++IAQ+QSG
Sbjct: 88 DPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSG 146
Query: 387 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGT 563
TGKTA F +++L ++ Q L L+PT ELA Q +V+ +G F ++VQ I G
Sbjct: 147 TGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGN 206
Query: 564 NLGEDIRKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVLDEADEMLN-KGFKEQIY 737
+ R D + ++ GTPG V D + +++ I++ VLDEAD M++ +GF +
Sbjct: 207 RIP---RGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSI 263
Query: 738 DVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
+ R LP Q++L SAT + + + DP I ++++ELTL I+Q+ V E +
Sbjct: 264 RIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRK 323
Query: 918 WK 923
K
Sbjct: 324 DK 325
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 143 bits (347), Expect = 8e-33
Identities = 78/229 (34%), Positives = 121/229 (52%), Gaps = 3/229 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF+++GL E+LR + G P+ IQ++SI ++ GRD++ AQ+GTGKT F + +L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 426 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
+ R + L+LSPTRELATQI + +++ +GG + R L
Sbjct: 62 KIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLKR 121
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
+V TPGR+ D +RR L + ++++DEAD ML+ GF I + R LP Q +
Sbjct: 122 NWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQSL 181
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
L SAT P I E+ + F D + + V+ + + I Q + V K
Sbjct: 182 LFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQK 230
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 143 bits (347), Expect = 8e-33
Identities = 90/254 (35%), Positives = 136/254 (53%), Gaps = 9/254 (3%)
Frame = +3
Query: 189 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 347
SE S+VE DT E V F SMGL + +GI G++ P+ IQ+++I I
Sbjct: 71 SECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 130
Query: 348 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIQKVILALG 521
+ G+DV+A A++G+GKTA F + + + L T +T + LILSPTRELA Q K LG
Sbjct: 131 LDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELG 190
Query: 522 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEAD 701
F ++ +GG + + L ++ TPGR+ + L+ +S++ +V DEAD
Sbjct: 191 KFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEAD 250
Query: 702 EMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEG 881
+ GF EQ+ ++ LP Q VL SATLP ++E +T+P+ I + D E
Sbjct: 251 RLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQ 310
Query: 882 IKQFXVAVEREEWK 923
+K V RE+ K
Sbjct: 311 LKTSFFLV-REDTK 323
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 143 bits (346), Expect = 1e-32
Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 2/225 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F SMGL ++RGI G++ P+ IQ+++I + GRDV+A A++G+GKTA F I + +
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 429 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L T +T + LILSPTRELA Q Q+ I +G F ++ +GG ++ +
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQFSAIHGNP 159
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
++ TPGR + + +SI+ ++ DEAD + GF EQI+++ LP Q +L
Sbjct: 160 DIIVATPGRFLHICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIHEIANRLPKNRQTLLF 219
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
SATLP ++E + + +P+ + + + + +K + EE
Sbjct: 220 SATLPKVLVEFATAGLRNPVLVRLDVESKLPDELKLCFITCRPEE 264
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 143 bits (346), Expect = 1e-32
Identities = 81/228 (35%), Positives = 128/228 (56%), Gaps = 2/228 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF+++ L + +L+ + G+ P+ IQ++SI +++G+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 426 TLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 599
L T + + L+L+PTRELA QI + A G + ++ GG L G
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSG 121
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
++ TPGR+ D+I + + S+ VLDEAD ML+ GF I + + LP Q +
Sbjct: 122 IQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTLF 181
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
SAT+P EI + + +T P ++ V T++ I Q VE++E K
Sbjct: 182 FSATMPPEIETLANSMLTKPEKVEVTPASSTVDIISQQVYFVEKKEKK 229
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 143 bits (346), Expect = 1e-32
Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 2/202 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F SMGL LLR I+ GF+ P+ IQ+++I +++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 429 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L +TL T+ LILSP RELA Q KV+ +++ A +GG +L E L
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKP 190
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
+V TPGR + L SI+ +V DEAD + GF Q+ ++ LP + Q +L
Sbjct: 191 DIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLF 250
Query: 783 SATLPHEILEMTSKFMTDPIRI 848
SATLP +++ + DP+ +
Sbjct: 251 SATLPRTLVDFAKAGLQDPVLV 272
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 142 bits (345), Expect = 1e-32
Identities = 72/196 (36%), Positives = 114/196 (58%), Gaps = 1/196 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 422
+F+ +GL ++ L + GF P+ IQ +I ++ G ++IA+A++GTGKTA F + ++
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLI 106
Query: 423 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
Q L + L+L PTRELA Q+ + +L + H GG ++ E +R L+ G
Sbjct: 107 QELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGG 166
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
++ GT GRV D I R L ++ +LDEADEMLN GF E I ++ + +V++
Sbjct: 167 EIIVGTTGRVIDHIERGSLELSYLRYFILDEADEMLNMGFVEDIESIFSHANKDARVLMF 226
Query: 783 SATLPHEILEMTSKFM 830
SAT+P +IL + S FM
Sbjct: 227 SATMPRQILSIASTFM 242
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 142 bits (344), Expect = 2e-32
Identities = 79/224 (35%), Positives = 123/224 (54%), Gaps = 1/224 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 425
F M ++ E+L+ + GFEKP+ IQ+ ++LP +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLPFAFEGKDIIGQAQTGTGKTAAFAIPILS 61
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
LD ++ Q L+++PTRELA QI + LG + + +GG + + L+ G +
Sbjct: 62 NLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVN 121
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V TPGR+ D++ + + IK LDEADE+L GF +I + LP Q +
Sbjct: 122 IVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQNFFFT 181
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
AT + +++ + + I + T E I Q V V EE
Sbjct: 182 ATFDEKTKKLSQEITNEAKMISMSSGLETTEKIDQNFVVVSEEE 225
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 142 bits (344), Expect = 2e-32
Identities = 80/228 (35%), Positives = 131/228 (57%), Gaps = 6/228 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL +L+ + GF KP+ IQ+R I +++ D++A+AQ+G+GK+A+F + IL+
Sbjct: 3 FSKLGLSQNILQALKQNGFTKPTPIQERVIPLVLERHDIMAKAQTGSGKSASFILPILEL 62
Query: 429 LDTTLRE----TQVLILSPTRELATQIQKVILALGDFMNVQCHAC--IGGTNLGEDIRKL 590
L E +VL+L+PTREL QI + G FM+ + IGG +GE + +
Sbjct: 63 LSRDSYEGKAKIKVLVLTPTRELTQQIVEAFNTFGAFMSKKPKVVGVIGGEGIGEQLFNI 122
Query: 591 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
G ++ T GR D++ ++ + + VLDEAD+ML+ GF E++ + L Q
Sbjct: 123 QKGCDILVATSGRFLDILSKKQMILSHVDFFVLDEADKMLDFGFAEELELILEALGQKRQ 182
Query: 771 VVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
+L SAT P ++L + SK M +PI + V+ +E T+E + Q + V RE
Sbjct: 183 NLLFSATYPPKMLFIASKIMQNPIEVSVEDEEPTVESVVQRAILVSRE 230
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 142 bits (344), Expect = 2e-32
Identities = 79/215 (36%), Positives = 122/215 (56%), Gaps = 1/215 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 425
F ++GL + + + GF++PS IQ+++I ++ + D+I QAQ+GTGKTA F + I+Q
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
++ L++ Q LIL PTRELA Q+ + I + + GG + + R L G
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVD 123
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V TPGR I L S++ LVLDEADEMLN GF E + V + P V++ S
Sbjct: 124 LVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLMFS 183
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
AT+P + ++ +M + I I K + +T+E I Q
Sbjct: 184 ATMPPRLKKIAESYMHNSITIKAKSETMTMETIDQ 218
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 142 bits (344), Expect = 2e-32
Identities = 86/263 (32%), Positives = 145/263 (55%), Gaps = 6/263 (2%)
Frame = +3
Query: 153 TSSEVSSXRKILSEDLSNVEF--DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 326
TS++ + ++ +++S+ T + + + + L +LL+GI GF KPS IQ
Sbjct: 67 TSNDFMRPKHVMLDEISDALLVDGTQFNENINMQWSQLPLSPDLLKGIQNMGFAKPSKIQ 126
Query: 327 QRSILPIVKGR--DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 500
Q + LP++ G ++IAQA++G+GKTATF++++L ++ + Q L + PTRELATQ
Sbjct: 127 QCA-LPLILGSCTNIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNV 185
Query: 501 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 680
+VI LG F ++C + ED + H+ GTPG+ D +++R++ ++ M
Sbjct: 186 QVIQKLGQFTQIKCFLGVPQCPRYED----NDQYHLYVGTPGKTMDFLKKRIMNVTNVVM 241
Query: 681 LVLDEADEMLNK--GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILV 854
LVLDEADE++N+ Q+ + + Q+VL SAT + +K I V
Sbjct: 242 LVLDEADELINQQNNMGPQVLQIRNFFRGPVQIVLFSATFSDNVYNFATKIAPRAHVIQV 301
Query: 855 KRDELTLEGIKQFXVAVEREEWK 923
KR++LTL+ I Q + +E K
Sbjct: 302 KREQLTLDCIDQRYMICNDDEDK 324
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 142 bits (343), Expect = 2e-32
Identities = 74/227 (32%), Positives = 126/227 (55%), Gaps = 3/227 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 419
TF+ +G+ E+ + I G+E P +Q+ ++P + G DV+A AQ+GTGKTA F + +
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEE-VIPYLLGENNDVVALAQTGTGKTAAFGLPL 61
Query: 420 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDY 596
LQ +D R Q LIL PTREL QI + +++ ++ GG+++ IR L
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKR 121
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G H++ TPGR+ D++ R+ + ++ +V+DEADEMLN GF + I + +P +
Sbjct: 122 GVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSINAILADVPKERNTL 181
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
L SAT+ EI ++ ++ + I + R + +K V+ ++
Sbjct: 182 LFSATMSPEIARISKNYLQNAKEITIGRKNESTSNVKHVAYTVQAKD 228
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 142 bits (343), Expect = 2e-32
Identities = 77/226 (34%), Positives = 130/226 (57%), Gaps = 4/226 (1%)
Frame = +3
Query: 183 ILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 362
+ ++D S + + D TF+ + L E +R I G+ P+ IQ +I +++G+D
Sbjct: 4 VSAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKD 63
Query: 363 VIAQAQSGTGKTATFSISILQTL---DTTLR-ETQVLILSPTRELATQIQKVILALGDFM 530
++A AQ+GTGKTA F + I++ L D R + L+L+PTRELA Q++ A ++
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYL 123
Query: 531 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEML 710
++ A GG ++ +++L G ++ TPGR+ D+I ++++R ++K+LVLDEAD ML
Sbjct: 124 ALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRML 183
Query: 711 NKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRI 848
+ GF I V YLP Q ++ SAT I ++ + DP+ I
Sbjct: 184 DMGFIRDIKKVIEYLPKNRQNMMFSATFSTPIKKLALGLLNDPVEI 229
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 142 bits (343), Expect = 2e-32
Identities = 74/227 (32%), Positives = 132/227 (58%), Gaps = 5/227 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL E+++ + G+ P+ IQ ++I ++ +D++ AQ+GTGKTA F++ ++Q
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 429 LDTTL-----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L R + +ILSPTRELA QI + ++ G + + IGG + + +R L
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLS 224
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G ++ TPGR+ D++ ++ LR K LVLDEAD+ML+ GF + + + Q
Sbjct: 225 KGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQT 284
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
+L SAT+ EI ++T ++TDP+++ V + T++ I+Q + + ++
Sbjct: 285 LLFSATMSKEIKKLTETYLTDPVQVSVTPENSTVDKIEQSLMHLSKQ 331
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 142 bits (343), Expect = 2e-32
Identities = 75/228 (32%), Positives = 130/228 (57%), Gaps = 3/228 (1%)
Frame = +3
Query: 192 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 371
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 372 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 542
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 543 HACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGF 722
+GG + E + ++ TPGR+ +I LR ++ +V DEAD + GF
Sbjct: 125 ACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGF 184
Query: 723 KEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDE 866
++Q+ + + +P + Q +L SATLP +++ +TDP+ + + DE
Sbjct: 185 QDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPMLVRLDVDE 232
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 142 bits (343), Expect = 2e-32
Identities = 80/225 (35%), Positives = 125/225 (55%), Gaps = 2/225 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F S L LL I GF P+ IQ+++I P+++G DV+A A++G+GKTA F I +L T
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 429 LDTTLRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L + + L+LSPTREL+ QI + AL F++++ A +GG ++ + L
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELLASNP 143
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
VV TPGR+ ++ L S++ LVLDEAD + G + QI + + LP + Q L
Sbjct: 144 DVVVATPGRLLHIMEEASLHLTSVRCLVLDEADRLFELGLQPQIGAIMQKLPESCQRALF 203
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
SAT+P + E TS + +P+ I + + + +KQ V +E
Sbjct: 204 SATMPTVLAEFTSAGLHNPVVIRLDSEMKLSDQLKQSAFLVRNDE 248
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 142 bits (343), Expect = 2e-32
Identities = 75/223 (33%), Positives = 134/223 (60%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
++S+GL LL+ I G++ PS +Q SI ++ G++++ ++++GTGKTA++ + +L
Sbjct: 110 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNM 169
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
++++ Q +IL P RELA QI + + + + V +GGT++ +DI ++ G HV
Sbjct: 170 INSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGTSMQDDIIRVSNGVHV 229
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
+ GTPGR+ D++ +RV +LV DEAD++L+ F E + + LP Q++L SA
Sbjct: 230 MVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETVTKLLDLLPREKQMLLYSA 289
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
T P+ + ++M +P+ I + + EL G+KQF V+ E
Sbjct: 290 TFPYFVTGFIRRYMKNPLCINLMK-ELAPVGVKQFYTYVKPSE 331
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 141 bits (342), Expect = 3e-32
Identities = 83/234 (35%), Positives = 123/234 (52%), Gaps = 8/234 (3%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF L ++ + I G+ +P+ IQ ++I ++ G DV+ AQ+GTGKTA FS+ IL
Sbjct: 21 TFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILN 80
Query: 426 TLDTTLRET--------QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 581
L E + LIL+PTRELA Q+ + F ++ GG ++ I
Sbjct: 81 RLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQI 140
Query: 582 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 761
+ L G +V TPGR+ D ++++ + +++LVLDEAD ML+ GF + + LP
Sbjct: 141 QTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPK 200
Query: 762 ATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
Q +L SAT EI ++ FM P I V R T E IKQ A++ EE K
Sbjct: 201 TRQNLLFSATFSPEIQKLAKSFMVSPTLIEVARRNATSENIKQVIFALDSEEDK 254
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 141 bits (341), Expect = 4e-32
Identities = 84/222 (37%), Positives = 121/222 (54%), Gaps = 1/222 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQ 425
FDS L D L G+ G+E + +Q R +PI + G DVI QA++G+GKTA F + IL+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQ-RDTVPIARQGTDVIGQARTGSGKTAAFGLPILE 65
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+ + Q L+L+PTRELA Q+ + L + GGT+L + + L G
Sbjct: 66 RCQPS-GKLQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTLAKGVD 124
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ GTPGRV DM R + S KML LDEAD ML+ GF I + + Q +L S
Sbjct: 125 IIVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFPDIMWIVERMTSRQQTLLFS 184
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
AT P EI++ +FM +P +L +EL + I + V + R
Sbjct: 185 ATFPQEIIDAAHEFMNEPDFVLTNAEELDIPPIDLYSVRIGR 226
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 141 bits (341), Expect = 4e-32
Identities = 80/224 (35%), Positives = 119/224 (53%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F + L E L + GFE P+ IQ ++I P + G+DVI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
L T+ L+L+PTRELA QI + + G V+ IGG + + L +
Sbjct: 65 RL-AGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V TPGR+ D + + R I+ LVLDEAD ML+ GFK Q+ + R LP Q +L S
Sbjct: 124 IVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFS 183
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
AT+ E+ + + DP+R+ V R T +Q ++ E
Sbjct: 184 ATMAGEVADFARAHLRDPVRVEVARSGTTAARAEQQVFLADQHE 227
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 141 bits (341), Expect = 4e-32
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 1/196 (0%)
Frame = +3
Query: 270 DELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRE 449
+ LL + T GF + IQQ+SI PI+KG+D++AQ+++G+GKT F I + D +
Sbjct: 12 EALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVKSNK 71
Query: 450 TQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPG 626
Q ++++PTRELA Q+ + + + N++ GG L L G H++ GTPG
Sbjct: 72 PQTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGAHILIGTPG 131
Query: 627 RVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEI 806
R+ D + + L SIK LVLDEAD ML+ GF E+I + +P Q +L SAT P +I
Sbjct: 132 RIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQKQTLLFSATFPPKI 191
Query: 807 LEMTSKFMTDPIRILV 854
+ + DP+ I V
Sbjct: 192 ESLAKALLKDPLTIKV 207
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 141 bits (341), Expect = 4e-32
Identities = 70/210 (33%), Positives = 120/210 (57%), Gaps = 1/210 (0%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 419
+ T + + + + + + G + S IQ +S+ ++G+DVI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 420 LQTLDTTLRETQVLILSPTRELATQI-QKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
L+ ++ TQ ++L PTRELA Q+ Q+ A D N++ GG +G I+ L +
Sbjct: 63 LEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKH 122
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
H++ GTPGRV D + +R + R++K+ VLDEAD ML+ GF++ + ++ P Q +
Sbjct: 123 SPHIIVGTPGRVMDHVEKRRIDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQTL 182
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDE 866
L SAT +I + +++ +P+ V+ E
Sbjct: 183 LFSATFTEQIERVAKQYLHNPVTCKVESQE 212
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 140 bits (340), Expect = 6e-32
Identities = 82/224 (36%), Positives = 120/224 (53%), Gaps = 6/224 (2%)
Frame = +3
Query: 255 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 434
S L LR I G+ P+AIQ ++I I+ GRDV+ AQ+G+GKTA F++ +LQ L
Sbjct: 9 SPALLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLA 68
Query: 435 T----TLRETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRKLDY 596
T R T+ LIL PTRELA Q+ + I ++ V+ GG ++ + L
Sbjct: 69 NAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRG 128
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G +V TPGR+ D++ L+ + LVLDEAD +L+ GF E++ + LPP Q +
Sbjct: 129 GADIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRILELLPPRRQNL 188
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
SAT P I + + DP+RI V+ T I Q + V+
Sbjct: 189 FFSATFPPAIEVLAESMLHDPLRIEVQAVPETKPDIAQRAIQVD 232
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 140 bits (340), Expect = 6e-32
Identities = 87/247 (35%), Positives = 129/247 (52%), Gaps = 10/247 (4%)
Frame = +3
Query: 159 SEVSSXRKILSEDLSN-VEFDTSEDVEVIP-----TFDSMGLRDELLRGIYTYGFEKPSA 320
SEVS ++ SE +S V ED E P T+D M L + + + G+ P+
Sbjct: 122 SEVSGHTEVDSELVSEAVAAPEGEDAEEEPDPAPETWDEMALPEHVRNAVDAAGWTAPTK 181
Query: 321 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL----QTLDTTLRETQVLILSPTRELA 488
+Q R+ +++G DV+ Q+Q+G+GKT F + L Q D Q+++L PTRELA
Sbjct: 182 VQARTYETMIQGTDVLVQSQTGSGKTGAFCLPWLANRFQPGDAAETGVQLIVLLPTRELA 241
Query: 489 TQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTR 668
Q+ ++ L V GGT + + L G H V GTPGRV D IRR+ L
Sbjct: 242 KQVCNELVRLAIETPVDVLPVYGGTAMNPQLDALARGVHAVVGTPGRVLDHIRRKSLDLS 301
Query: 669 SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRI 848
++ +VLDE DEML+ GF E I + R P Q L SAT+P +I + + M +P I
Sbjct: 302 KVRTVVLDECDEMLSMGFLEDIRAILRACPKERQTCLFSATVPRDIARIARRDMREPEHI 361
Query: 849 LVKRDEL 869
++ D++
Sbjct: 362 VLSGDDI 368
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 140 bits (339), Expect = 7e-32
Identities = 76/222 (34%), Positives = 126/222 (56%), Gaps = 1/222 (0%)
Frame = +3
Query: 255 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 434
+ L +EL+ + T +P+ IQ++SI + G D++A +Q+G+GKT + +L +D
Sbjct: 7 NFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAY---LLPLID 63
Query: 435 TTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVV 611
+ ++ +T LIL PTRELATQI + + + IGG + + +L V+
Sbjct: 64 SFIKNKTTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKVI 123
Query: 612 SGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISAT 791
GTPGR+ D + R L+ I + VLDE D ML+ G KEQ+ ++ ++LP QV++ SAT
Sbjct: 124 IGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSAT 183
Query: 792 LPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
+P I+ ++ K++ +P+RI V IKQ + V +E
Sbjct: 184 MPKHIIAVSQKYLNNPVRITVGATNKAAAEIKQESMHVSDKE 225
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 140 bits (339), Expect = 7e-32
Identities = 76/224 (33%), Positives = 119/224 (53%), Gaps = 1/224 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL L+RG+ G+ P+ +Q R+I ++ GRD++A AQ+GTGKTA F++ +L
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 429 LDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
L +VL+L PTREL Q++ G F +V+ GG G+ L G
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTD 122
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
+V T GR+ D I+ + +R S+++L+LDE D ML+ GF + + P Q + S
Sbjct: 123 IVIATVGRLMDFIKEKEIRLDSVEVLILDEVDRMLDMGFINDVKRIVGLCPKQRQTLFFS 182
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
AT+P EI ++ + +P RI + R E +K V E+
Sbjct: 183 ATIPPEIEDVARFALQNPERIEIGRARTVNESVKHAIYPVTFEQ 226
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 140 bits (339), Expect = 7e-32
Identities = 72/223 (32%), Positives = 126/223 (56%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F L+D + + GF++PS +Q+ +I +++G D+IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+ + L++ PTRELA Q+ + G ++ GGT G+ I ++ V
Sbjct: 63 MKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERIKQASIV 121
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
V+ TPGR+ D++ ++ +VLDEADEML+ GF ++I +++ +LP Q ++ SA
Sbjct: 122 VA-TPGRLQDLLMSGKIKLNP-HFVVLDEADEMLDMGFLDEIKNIFTFLPKERQTLMFSA 179
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
T+P+ I ++ + + +P + + + E T I Q+ V+ E
Sbjct: 180 TMPNGIRKLAEQILNNPKTVSITKSESTNSKITQYYYVVQERE 222
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 140 bits (339), Expect = 7e-32
Identities = 77/228 (33%), Positives = 124/228 (54%), Gaps = 5/228 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F L +L + ++ P+ IQQ +I I++G+D++A A++GTGKTA F++ IL+
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 429 LDTTLR-----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L + R +T+VL+L PTRELA Q+ + I + + + GG + I+ L
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQALK 122
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G +V TPGR+ D+ + L I LV DEAD M + GF I + + LP Q
Sbjct: 123 SGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKRQN 182
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
+L SAT P E++ + + + DP+RI ++ T I Q + V+R++
Sbjct: 183 LLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDK 230
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 140 bits (339), Expect = 7e-32
Identities = 74/213 (34%), Positives = 123/213 (57%), Gaps = 5/213 (2%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F++ GL +ELLR +Y+ GF PS IQ +S ++ RD++A A++G+GKT + I
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 426 TLDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L +++ +L+LSPTRELATQIQ L G + C GG G +++++
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G +V TPGR+ D++ + + + LVLDEAD ML+ GF+ QI + +P Q
Sbjct: 282 RGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQT 341
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKR-DEL 869
++ +AT P E+ ++ + + +P ++ + DEL
Sbjct: 342 LMYTATWPKEVRKIAADLLVNPAQVNIGNVDEL 374
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 140 bits (338), Expect = 1e-31
Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 2/218 (0%)
Frame = +3
Query: 258 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQTLD 434
MG ++L G+ GF++PS IQ ++I P+ + G D+I +A+SGTGKT F I L+ +D
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAI-PLGRCGFDLIMRAKSGTGKTLVFCIISLEMID 59
Query: 435 TTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQHVV 611
+ QVLIL+PTRE+A QI +V ++G + +++ IGG + D +K++ Q V
Sbjct: 60 IDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKVNNCQIAV 119
Query: 612 SGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISAT 791
G PGR+ +I + L+ ++++ VLDEAD+++ F++ I ++ LP + QV+ SAT
Sbjct: 120 -GAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETSFQKDINYIFSKLPLSKQVIASSAT 178
Query: 792 LPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
P ++ +M P+ + +E L G++QF V
Sbjct: 179 YPGDLEIFLQTYMCSPVLVSPNNNEPILIGLRQFVTIV 216
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 139 bits (337), Expect = 1e-31
Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 3/208 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F +GL ELL+ + G+E+P+ +Q +I ++ RD+IA AQ+GTGKTA+F + ++
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 426 TLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
L R + LIL PTRELA Q+ + G + + IGG + E L+
Sbjct: 62 ILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEK 121
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G V+ TPGR+ D+ R + S +MLV+DEAD ML+ GF I + LP + Q +
Sbjct: 122 GVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTL 181
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKR 860
L SAT+P I ++ +F+++P +I + R
Sbjct: 182 LFSATMPPAIKKLADRFLSNPKQIEISR 209
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 139 bits (337), Expect = 1e-31
Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 5/236 (2%)
Frame = +3
Query: 222 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 401
+ + + F +GL LL+ + G+ P+ IQ ++I ++ GRD++ AQ+GTGKTA
Sbjct: 58 ARETHSLTQFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTA 117
Query: 402 TFSISILQTL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 566
F++ IL L R + L+LSPTRELATQI + G M + GG
Sbjct: 118 AFALPILHRLAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVK 177
Query: 567 LGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVY 746
G ++ L G VV TPGR+ D + + +++ VLDEAD+ML+ GF I +
Sbjct: 178 YGPQMKALAAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIA 237
Query: 747 RYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
LP Q + SAT+P EI ++ + + +P ++ + T+E I Q + +E +
Sbjct: 238 SQLPKERQNLFFSATMPSEIGKLAGELLKNPAQVAITPSATTVERIDQSLIFIEAQ 293
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 139 bits (337), Expect = 1e-31
Identities = 89/251 (35%), Positives = 137/251 (54%), Gaps = 12/251 (4%)
Frame = +3
Query: 186 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 365
L D +NVE D E++ + + L L + G IQ+ ++P ++GRD+
Sbjct: 87 LDGDNNNVEADDGEELAI----SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDI 142
Query: 366 IAQAQSGTGKTATFSISILQTLD------TTLRET----QVLILSPTRELATQIQKVILA 515
IA+A++GTGKT F I I++ L T R + + L+L+PTRELA Q++K I
Sbjct: 143 IARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE 202
Query: 516 LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDE 695
+++ C GG + L G VV GTPGR+ D+I R L+ ++ LVLDE
Sbjct: 203 SAPYLSTVC--VYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDE 260
Query: 696 ADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRI-LV-KRDEL 869
AD+ML GF+E + + LP Q +L SAT+P + ++ K++ +P+ I LV +DE
Sbjct: 261 ADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEK 320
Query: 870 TLEGIKQFXVA 902
EGIK + +A
Sbjct: 321 LAEGIKLYAIA 331
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 139 bits (337), Expect = 1e-31
Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 12/273 (4%)
Frame = +3
Query: 141 IRKMTSSEVSSXRKILSE-DLSNVEFDTSEDVEVIPT--FDSMGLRDELLRGIYT-YGFE 308
+ ++ E IL E + SN++ TS D F+ + L EL++G+Y FE
Sbjct: 54 LNSLSIKEEEKPDSILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFE 113
Query: 309 KPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRE 482
KPS IQ S+ I+ + +IAQA +G+GKT F + +L +D TLRE Q L + PTRE
Sbjct: 114 KPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRE 173
Query: 483 LATQIQKVILALGDFMNVQCHACIGGTNLGED--IRKLDYGQHVVSGTPGRVFDMIRRRV 656
LA Q +V+ +G F + + + G R HVV GTPG + + +
Sbjct: 174 LANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKR 233
Query: 657 LRTRSIKMLVLDEADEML-NKGFKEQIYDVYR---YLPPATQVVLISATLPHEILEMTSK 824
L +K+LV DEAD ML GF++ + + + P QV+L SAT + + ++
Sbjct: 234 LGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVAR 293
Query: 825 FMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
+ DP ++ VKR++L L+ +KQ+ V +E+ K
Sbjct: 294 TVKDPNQLFVKREDLALDSVKQYKVVCPKEQNK 326
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 139 bits (336), Expect = 2e-31
Identities = 70/219 (31%), Positives = 125/219 (57%), Gaps = 5/219 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F + L + ++ + G+++P+ IQ+ I ++ G D++ AQ+GTGKTA FS+ I+
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 429 -----LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
+D + T+ LIL+PTRELA+QI + I D + ++ GG + ++
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G ++ TPGR+ D+I + +++++ VLDEAD ML+ GF + + + LP + Q
Sbjct: 124 LGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQT 183
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
+L SAT+P EI + +TDP +I + + +T++ + Q
Sbjct: 184 LLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQ 222
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 139 bits (336), Expect = 2e-31
Identities = 70/223 (31%), Positives = 124/223 (55%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F L +E+++ + + +P+ IQ++ I ++G+D+IA++++G+GKTA F+I I ++
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+ Q L+L PTRELA Q++ I +G V+ GG + L H+
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKSHI 125
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
V GTPGRV D L+ ++K +++DEAD ML+ GF + + + YLP ++L SA
Sbjct: 126 VVGTPGRVLDHCETGTLKCSNVKYVIIDEADLMLDMGFLDDVKRILSYLPENITIMLFSA 185
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
T+ + +T +FM P+ + ++ T++ I+Q V E+
Sbjct: 186 TMGEALYALTDEFMNSPVEVKLEDGTETVDSIEQLGCFVTEED 228
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 139 bits (336), Expect = 2e-31
Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 5/223 (2%)
Frame = +3
Query: 264 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 443
L+ ELLR I GFE PS +Q I + G DVI QA+SG GKTA F +S LQ ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 444 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTN--LGEDIRKLDYGQHVVS 614
+ L+L TRELA QI + ++ + + GG N + +D+ K + H+V
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNEC-PHIVV 171
Query: 615 GTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISAT 791
GTPGRV + R + L ++++ +LDE D+ML + + ++++ P QV++ SAT
Sbjct: 172 GTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 231
Query: 792 LPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFXVAVEREE 917
L EI + KFM DP+ I V + +LTL G+ Q + + E
Sbjct: 232 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEME 274
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 138 bits (335), Expect = 2e-31
Identities = 75/215 (34%), Positives = 119/215 (55%), Gaps = 1/215 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+ + + ++ + + F + IQ I I+KG DVI QAQ+GTGKT F I I++
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 605
++ +++TQ LIL PTREL Q+ + + L F ++ GG + + R L+ H
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEAKPH 124
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
++ TPGR D + R + ++K+L LDEADEML GF+E + + + +P Q VL S
Sbjct: 125 LIIATPGRAIDHLERGKIDLSALKILTLDEADEMLKMGFQEALETILKKIPEERQTVLFS 184
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
ATLP I ++ SK+ D + V + + I+Q
Sbjct: 185 ATLPPFIKKIASKYQKDTKILQVPVKNIAVNAIEQ 219
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 138 bits (335), Expect = 2e-31
Identities = 76/223 (34%), Positives = 119/223 (53%), Gaps = 8/223 (3%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TFD GL E+L+ I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 426 TL--------DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 581
L + LIL+PTRELA Q+ + A ++ GG ++ +
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 582 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 761
+L G ++ TPGR+ D ++++ +++LVLDEAD ML+ GF + + LP
Sbjct: 132 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 191
Query: 762 ATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
Q +L SAT EI ++ S ++ +P I V R + Q
Sbjct: 192 ERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQ 234
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 138 bits (335), Expect = 2e-31
Identities = 76/209 (36%), Positives = 120/209 (57%), Gaps = 3/209 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F L+ E+L ++ G P+ IQ ++ ++G+D+I QA++GTGKT F++ I +
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 429 LDTTL---RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 599
L + R+ + L+L+PTRELA Q+ + A+ + V A GGT G+ L G
Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVV--AVYGGTGYGKQKEALLRG 120
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
V TPGR D +R+ VL +++ VLDEADEML+ GF+E++ + PP+ Q +L
Sbjct: 121 ADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLL 180
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDE 866
SATLP + ++M +P+ I V +DE
Sbjct: 181 FSATLPSWAKRLAERYMKNPVLINVIKDE 209
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 138 bits (334), Expect = 3e-31
Identities = 76/226 (33%), Positives = 126/226 (55%), Gaps = 4/226 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F+++GLRDEL+ I T G+ + IQ+ +I ++ D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 426 TL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L T ++ + LI++PTRELA Q+ + +N++ A GG + I +L
Sbjct: 62 RLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQ 121
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G V+ TPGR+ D+ +R L ++++LV DEAD ML+ GF + + + LP Q
Sbjct: 122 EGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVKRQT 181
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
+L SAT +I + + P I V T++ + Q +E+
Sbjct: 182 LLFSATFSKQIKHFAREMLNAPKTIEVSAVNSTVDLVAQTFHPIEQ 227
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 138 bits (334), Expect = 3e-31
Identities = 75/227 (33%), Positives = 124/227 (54%), Gaps = 3/227 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
FD++GL ++++ + G+ P+ IQ +I +++ +DV+ AQ+GTGKTA+F + +L
Sbjct: 8 FDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQTGTGKTASFVLPMLTL 67
Query: 429 LD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 599
L+ R + LIL PTRELA Q+++ G + IGG + RKL+ G
Sbjct: 68 LEKGRAKARMPRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLERG 127
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
V+ TPGR+ D R L +++LV+DEAD ML+ GF I + + P Q +
Sbjct: 128 ADVLIATPGRLLDHFERGTLLLMGVEILVIDEADRMLDMGFIPDIERICKLTPFTRQTLF 187
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEW 920
SAT+ EI+++T +F+ P+ + + ++ T I Q V + W
Sbjct: 188 FSATMAPEIIKLTEQFLHSPVCVEITKESSTARTITQRLVKSGSKAW 234
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 138 bits (334), Expect = 3e-31
Identities = 77/212 (36%), Positives = 123/212 (58%), Gaps = 5/212 (2%)
Frame = +3
Query: 234 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 413
E +PTF+ + L LL+ + GF +P+ IQ ++I + G+D++A A +G+GKTA F +
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 414 SILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG-TNLGEDI 581
+L+ L D+ R +VLIL PTRELA Q Q V+ L F N+ +GG +N +++
Sbjct: 247 PVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEV 306
Query: 582 RKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 758
+L VV TPGR+ D ++ + +++L+LDEAD +L+ GFK++I + P
Sbjct: 307 -ELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCP 365
Query: 759 PATQVVLISATLPHEILEMTSKFMTDPIRILV 854
Q +L SATL E+ + + PIR+ V
Sbjct: 366 TNRQTMLFSATLNDEVKTLAKLSLQQPIRVQV 397
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 138 bits (333), Expect = 4e-31
Identities = 73/229 (31%), Positives = 128/229 (55%), Gaps = 1/229 (0%)
Frame = +3
Query: 225 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 404
E V + + +GL E+++ I G+ + + +Q +I ++ +DVIA+A +GTGKT
Sbjct: 6 EQVNEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFA 65
Query: 405 FSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACI-GGTNLGEDI 581
F I +++ +D Q L+L+PTRELA QIQ + L +F C+ GG + + I
Sbjct: 66 FGIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQI 125
Query: 582 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 761
L +V TPGR+ D ++RR ++ ++ +VLDEAD ML+ GF + + +
Sbjct: 126 TTLKKHPQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLDMGFIHDVTRILDQIKS 185
Query: 762 ATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
+ L SAT+ E+++++ + DP+ I+V+ DE I+Q+ + +E
Sbjct: 186 RKNLGLFSATISREVMDISWVYQRDPVEIVVRPDEENKPDIQQYRIDLE 234
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 137 bits (332), Expect = 5e-31
Identities = 76/227 (33%), Positives = 125/227 (55%), Gaps = 4/227 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL L++ + G+ P+ IQ ++I I+ G++V+A AQ+GTGKTA+F + +L
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 429 LDTT--LRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
+R +V +IL+PTRELA Q+++ I ++ + A GG + ++L
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G ++ TPGR+ DM +R +R + +LVLDEAD ML+ GF E I + LP Q +
Sbjct: 123 GVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQNL 182
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
L SATL ++ + + D I I + R I Q+ V++++
Sbjct: 183 LFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHIDQWLTTVDKDK 229
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 137 bits (331), Expect = 7e-31
Identities = 75/229 (32%), Positives = 124/229 (54%), Gaps = 3/229 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F + L +L+ I G+++P+ IQ +SI I+ + V+A AQ+GTGKTA F + IL
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILD 61
Query: 426 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
L E +VLI+SPTRELATQI I ++ + GG + G R
Sbjct: 62 KLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNRMFSK 121
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
++ TPGR+ D+ +++ + + +++++LDEAD ML+ GF I +Y Q++
Sbjct: 122 PIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNATSKKQQML 181
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
+ SAT I ++ +F+T+P+ I +K D + IKQ + + K
Sbjct: 182 MFSATFDPPIQKIAQEFLTNPVTISIKPDVSGHKNIKQLIYFADNQSHK 230
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 137 bits (331), Expect = 7e-31
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = +3
Query: 237 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 416
V+ FD M L++ LLRG+Y YGFEKPSAIQQR+ILP +KG DVIAQAQSGTGKTATF IS
Sbjct: 28 VVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFVIS 87
Query: 417 ILQTLDTTLRETQVLILSPTRELATQIQKV 506
ILQ +DT+L+ETQ LIL+PTRELA Q K+
Sbjct: 88 ILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 137 bits (331), Expect = 7e-31
Identities = 82/219 (37%), Positives = 117/219 (53%), Gaps = 4/219 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F +GL ++ + G++ P IQ + I ++KG D++ A +G+GKTA F + +LQ
Sbjct: 7 SFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLLQ 66
Query: 426 TLDTTLRETQVLILSPTRELATQIQKV----ILALGDFMNVQCHACIGGTNLGEDIRKLD 593
+D R Q LI+ PTRELA QI V I +L +N+ GG N L
Sbjct: 67 NIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIA--VLYGGQNYRIQFNDLK 124
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
H++ GTPGR+ D + R L +K L++DEADEML GF E I + RY+P Q
Sbjct: 125 KNPHIIIGTPGRLLDHLSRG-LDISKLKTLIIDEADEMLRMGFIEDIEHIIRYVPTHRQT 183
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
L SATLP I +++ KFM +P I + IKQ
Sbjct: 184 ALFSATLPVSIRKLSYKFMCNPKEIYINPSISACADIKQ 222
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 137 bits (331), Expect = 7e-31
Identities = 78/226 (34%), Positives = 123/226 (54%), Gaps = 2/226 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F MGL L + + F P+ +Q ++I +KG+D++ AQ+GTGKT F+I ++
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLGEDIRKLDYG 599
L + L++ PTRELA Q+ I L L + + ++ IGG + + +L
Sbjct: 63 KLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSV-LKIALLIGGEPIFRQLNQLQRR 121
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
+V GTPGR+ D I R+ L T ++ LVLDE D M + GF QI + +YLP Q ++
Sbjct: 122 PRIVIGTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMRQNLM 181
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
SATLP +I+++ K+ P R+ V+ + T IKQ + E
Sbjct: 182 FSATLPGDIVKLAEKYSNQPERVSVENEATTSVKIKQEIIYASESE 227
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 137 bits (331), Expect = 7e-31
Identities = 73/228 (32%), Positives = 128/228 (56%), Gaps = 3/228 (1%)
Frame = +3
Query: 243 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 422
P F+ +GL LL + G ++PS IQ ++I P+++G+DV+ +Q+G+GKTA F + +L
Sbjct: 20 PGFEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPML 79
Query: 423 QTLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
Q L + LIL PTRELA Q V LG ++++ GGT+ + ++ +
Sbjct: 80 QKLTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSD 139
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP-PATQV 773
G ++ T GR+ D++ + L + LVLDEAD +L++ F + + Y P Q
Sbjct: 140 GVDIIVATHGRLLDLVMQADLVLEHLTYLVLDEADRLLDEDFSASMTALTPYFPDQPPQT 199
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
V SATLP ++++ + +P+R+ + + T + I+Q + VE+++
Sbjct: 200 VFCSATLPEPVMDLAKRVTRNPVRVEIAAESFTPKNIRQRAIFVEKDD 247
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 137 bits (331), Expect = 7e-31
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 4/228 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL- 422
TF+ LL + + GF KP+ IQ +I I+ D++A AQ+GTGKTA + + IL
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILH 61
Query: 423 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG---TNLGEDIRKLD 593
+ +++ L+L PTRELA QI + I F+NV A GG + + L
Sbjct: 62 KIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKALT 121
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G ++V TPGR+ ++ + IK LVLDEAD ML+ GF + I V YLP Q
Sbjct: 122 DGANIVIATPGRLLAQLQSGTANLKQIKHLVLDEADRMLDMGFYDDIVRVISYLPTERQT 181
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
++ SAT+P ++ + +K M DP +I + + EGI Q V E+
Sbjct: 182 IMFSATMPTKMRALANKLMKDPQQINIAISK-PAEGILQQAYLVYEEQ 228
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 137 bits (331), Expect = 7e-31
Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 1/206 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+FDS ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 426 TLDTTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L R + +I++PTRELA QIQ VI ALG + ++ GG I++L G
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGV 121
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
+ PGR+ D + R L + ML+LDEAD+M + GF + + R P Q +L
Sbjct: 122 EIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQTMLF 181
Query: 783 SATLPHEILEMTSKFMTDPIRILVKR 860
SAT+P I + + + +P I + R
Sbjct: 182 SATMPDAIRALAREALREPQTIQIGR 207
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 136 bits (330), Expect = 9e-31
Identities = 70/219 (31%), Positives = 123/219 (56%), Gaps = 1/219 (0%)
Frame = +3
Query: 258 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT 437
M + + L + + F +P+ IQ+++I ++ G+DVI ++++G+GKTA + + +L +++
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEK 60
Query: 438 TL-RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVS 614
+ + +I+ PTRELA Q +V LG ++ GG ++ + +L G +V
Sbjct: 61 LKGKSVKAIIILPTRELALQTHRVASRLGKISGIKSTIVYGGASIIRQVEELP-GSDIVI 119
Query: 615 GTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATL 794
GTPGR+ D+ ++ L+ +K LVLDEAD ML+ GF + I + + P Q +L+SATL
Sbjct: 120 GTPGRILDLYNQKYLKLDHVKYLVLDEADLMLDMGFIDDIKKIISFTPEGRQTILLSATL 179
Query: 795 PHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
P E+ + + FM +P + DE IK E+
Sbjct: 180 PAEVKTIANHFMNNPEFVDAGGDEAIPSSIKHLYTVSEK 218
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 136 bits (330), Expect = 9e-31
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 5/211 (2%)
Frame = +3
Query: 300 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----VLI 464
G+E P+ IQ +I I++G D++ AQ+GTGKTA FS+ ILQ L R+ + LI
Sbjct: 23 GYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLI 82
Query: 465 LSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 644
L+PTRELA QI + I A +N++ GG +R L G ++ TPGR+ D+
Sbjct: 83 LTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQGGVDILIATPGRLMDLH 142
Query: 645 RRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSK 824
++ L+ +++ VLDEAD ML+ GF + I + LP + SAT+PHEI + ++
Sbjct: 143 GQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHNLFFSATMPHEIQTLANR 202
Query: 825 FMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
+ +P ++ V T E ++Q + V++ +
Sbjct: 203 ILVNPKKVEVTPVSSTAEKVEQRVMFVDKPQ 233
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 136 bits (330), Expect = 9e-31
Identities = 78/230 (33%), Positives = 126/230 (54%), Gaps = 6/230 (2%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 422
TF +G+R + ++ I G KP+ IQ+++I ++K D I AQ+GTGKTA F + +L
Sbjct: 3 TFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVL 62
Query: 423 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN--VQCHACIGGTNLGEDIRKLDY 596
+D Q LILSPTREL QI+K + +++ + A GG + + L
Sbjct: 63 HHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLKR 122
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
H+V TPGR+ D+I R + +K ++LDEADEML+ GFK+ + + ++ + +
Sbjct: 123 TTHIVIATPGRLIDLIERGAVDISHVKTVILDEADEMLSMGFKQDLNRILKFTTKSDRKT 182
Query: 777 -LISATLPHEILEMTSKFM-TDPIRILVKRDELTLEGIK-QFXVAVEREE 917
L SAT+P EI + +M + RI + ++ L I+ QF +E+
Sbjct: 183 WLFSATMPDEIKRIVKTYMDANAPRIEINKNTLVNANIRHQFAKTTLKEK 232
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 136 bits (329), Expect = 1e-30
Identities = 72/225 (32%), Positives = 127/225 (56%), Gaps = 4/225 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F + L EL + G+E+P+ IQ ++I +++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 426 TLDTT----LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L R + L+L+PTRELA Q+ L G + ++ + GG + I++L
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLK 124
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G ++ TPGR+ D++R++ + ++ LVLDEAD ML+ GF + I + Y Q
Sbjct: 125 RGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQT 184
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
+L +AT + + ++ +P +I V T + I+QF V+
Sbjct: 185 LLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAKQIRQFAYQVD 229
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 136 bits (329), Expect = 1e-30
Identities = 72/220 (32%), Positives = 120/220 (54%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F S+ L ++R + G+E + IQ++SI +++GRD++ + +G+GKT F I I++
Sbjct: 56 SFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIE 115
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+ LI++PTRELA QI + +L M + IGGTN+ D++ L H
Sbjct: 116 HALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRKLH 175
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
V+ GTPGR+ D+ R++L+ +K LVLDE D ML+ GF + + + Q +L S
Sbjct: 176 VIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLDMGFVNDVKKLVGGMTQREQTMLFS 235
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
ATL + + +P+ + + T E I+Q + V
Sbjct: 236 ATLEPNQKNLIQSLLKNPVEVKINTGVSTNENIEQGIIRV 275
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 136 bits (328), Expect = 2e-30
Identities = 73/224 (32%), Positives = 119/224 (53%), Gaps = 2/224 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +G+ +L+ + P+ +Q++SI +++G+D++A AQ+GTGKTA F + I+Q
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 429 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
+ R LIL PTRELA Q+ + + +++ GGT++G KL+ G
Sbjct: 69 VQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGA 128
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
++ TPGR+ D + + +LVLDEAD ML+ GF + + R LP Q++L
Sbjct: 129 DILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPNDKQIMLF 188
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
SAT I + K M P+ + V T E +KQ V+++
Sbjct: 189 SATFEKRIKTIAYKLMDSPVEVEVSPANTTAETVKQMVYPVDKK 232
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 136 bits (328), Expect = 2e-30
Identities = 71/226 (31%), Positives = 127/226 (56%), Gaps = 3/226 (1%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 419
+P+F + + + GFE+P+ +Q++ I I KG+ VI Q+Q+G+GKT TF + +
Sbjct: 1 MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPL 60
Query: 420 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRKLD 593
+ + T+ E Q++I +P+RELA QI + L F ++ +GGT+ + KL
Sbjct: 61 MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLK 120
Query: 594 YGQ-HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
+ Q HVV GTPGR+ DM+ + L+ + V+DEAD L+ GF ++ + LP Q
Sbjct: 121 HQQPHVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLDMGFLAEVDQIAGRLPEKLQ 180
Query: 771 VVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
+++ SAT+P ++ K++ +P+ +K + E I + ++ +
Sbjct: 181 MLVFSATIPEKLRPFLKKYLENPVIEHIKPKAVISETIDNWLISTK 226
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 136 bits (328), Expect = 2e-30
Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 8/209 (3%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF +GL E+L + G+ P+ IQ + I I+ G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 426 TL----DTTL----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 581
L +T++ + LI++PTRELA QI + + G ++ ++ GG N+ I
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQI 125
Query: 582 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 761
L G ++ TPGR+ D++ ++ + ++LVLDEAD ML+ GF I V L P
Sbjct: 126 AALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSP 185
Query: 762 ATQVVLISATLPHEILEMTSKFMTDPIRI 848
Q ++ SAT EI ++ + P+RI
Sbjct: 186 QRQSLMFSATFSGEIRKLADSLLKQPVRI 214
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 136 bits (328), Expect = 2e-30
Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 6/206 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
FD + L DE+L G+ F + + +Q +I PI++GRDVIA AQ+GTGKTA + + IL
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 429 LDTTLRETQVL---ILSPTRELATQIQKVILALGDFMNVQCHACIGGTN---LGEDIRKL 590
L + V+ I++PTRELA QI + + FM V A GGT+ + R +
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGM 122
Query: 591 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
G +V TPGR+ + + VLDEAD ML+ GF + I +Y+ LP + Q
Sbjct: 123 AMGADIVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQ 182
Query: 771 VVLISATLPHEILEMTSKFMTDPIRI 848
V+ SAT+P +I ++ + + DPI +
Sbjct: 183 TVMFSATMPPKIRKLAASILRDPIEV 208
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 136 bits (328), Expect = 2e-30
Identities = 69/198 (34%), Positives = 119/198 (60%), Gaps = 1/198 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF + L D++L + F + + IQ R+I ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIRKLDYGQ 602
++ R Q +I++PTRELA QI I G N+ IGG ++ + I++L Q
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDSQ 121
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
+V GTPGRV D + R+ L+ ++ ++LDEADEML GFK +I ++ + P Q+ L
Sbjct: 122 -IVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSPDVQIGLF 180
Query: 783 SATLPHEILEMTSKFMTD 836
SAT +++++ + +M +
Sbjct: 181 SATTSPKVMQIANDYMNE 198
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 136 bits (328), Expect = 2e-30
Identities = 78/226 (34%), Positives = 121/226 (53%), Gaps = 5/226 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F S+ + + +L+ I G++ P+ IQ +I I+ G D++ AQ+GTGKTA F+I +LQ
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 429 LDTTL-----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L+ R+ + LI++PTRELA QI + A G + GG N L
Sbjct: 144 LNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQ 203
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G ++ TPGR+ D++ + L R+I+ VLDEAD ML+ GF I + LP Q
Sbjct: 204 KGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQS 263
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
+ SAT+P EI + + + +P+ + V T+E I Q V++
Sbjct: 264 LFFSATMPPEITRLAASILHNPVEVSVTPVSSTVEIINQQIFFVDK 309
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 136 bits (328), Expect = 2e-30
Identities = 77/209 (36%), Positives = 121/209 (57%), Gaps = 3/209 (1%)
Frame = +3
Query: 237 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 416
V PTF S+GL EL + T G++ P+AIQ + ++GRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 417 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
ILQ L + LIL+PTREL QI + ILA+G + V +GG + L
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAK 168
Query: 597 GQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL--PPAT 767
HVV G+PGRV D +++ + +S+K+LVLDEAD +L+ F + + ++ P
Sbjct: 169 KPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAER 228
Query: 768 QVVLISATLPHEILEMTSKFMTDPIRILV 854
Q +L SAT+ ++ ++ + P+++ V
Sbjct: 229 QTMLFSATMTTKVSKLQKASLKKPVKLEV 257
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 136 bits (328), Expect = 2e-30
Identities = 79/205 (38%), Positives = 110/205 (53%), Gaps = 5/205 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ- 425
F+ GL D +L GF KP+AIQ + + + GRD++ AQ+G+GKT + L
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVH 183
Query: 426 -TLDTTLRETQ---VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
T LR L+L+PTRELA QIQ+V G +N GG G IR L+
Sbjct: 184 ITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLE 243
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G +V TPGR+ D + R + R LVLDEAD ML+ GF+ QI + + P QV
Sbjct: 244 RGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQV 303
Query: 774 VLISATLPHEILEMTSKFMTDPIRI 848
++ SAT P E+ + +F+ D I+I
Sbjct: 304 LMWSATWPKEVRNLAEEFLNDYIQI 328
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 136 bits (328), Expect = 2e-30
Identities = 75/224 (33%), Positives = 125/224 (55%), Gaps = 4/224 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F SM L +L+G+ GFE P+ IQ ++I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 426 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
L + T+VLIL PTRELA Q V + F ++ CIGG +L ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 597 GQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
+V TPGR D +R + +I+++V+DEAD ML GF +++ ++ + P + Q
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQT 439
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
+L SAT+ ++ ++ + P+R+ V + T + + Q V V
Sbjct: 440 MLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRV 483
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 135 bits (327), Expect = 2e-30
Identities = 69/202 (34%), Positives = 114/202 (56%), Gaps = 2/202 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F + L +L + F +P+ IQ +I P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 429 LDTTLRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L T R+ V LIL+PTRELA QI + +L + ++ +GG N +R + G
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
++V TPGR++D + R ++ +++ML+LDE+D ML+ GF I + +P Q +L
Sbjct: 124 NIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLF 183
Query: 783 SATLPHEILEMTSKFMTDPIRI 848
SATL + ++ + + +RI
Sbjct: 184 SATLESSVKQLVETHVRNAVRI 205
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 135 bits (327), Expect = 2e-30
Identities = 76/211 (36%), Positives = 121/211 (57%), Gaps = 8/211 (3%)
Frame = +3
Query: 300 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL----RETQV-LI 464
GF KPS IQ ++I ++ GRD+I A++G+GKT ++ + +++ + L E + L+
Sbjct: 407 GFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLV 466
Query: 465 LSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 644
LSPTRELA QI+K IL M+++ C GG+N+ I +L G +V+ TPGR+ D++
Sbjct: 467 LSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLL 526
Query: 645 RR---RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEM 815
R+ R +VLDEAD M + GF+ QI ++ + P Q VL SAT P ++ ++
Sbjct: 527 AANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQL 586
Query: 816 TSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
K + +PI I+V + I Q + E
Sbjct: 587 AKKVLHNPIEIIVGGVSVVASEISQEIILFE 617
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 135 bits (327), Expect = 2e-30
Identities = 68/191 (35%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Frame = +3
Query: 279 LRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQV 458
L + G+ + +Q ++ I+ G+DV QA++G+GKTA F + +LQ +D +L +TQ
Sbjct: 15 LTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQA 74
Query: 459 LILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVF 635
L+L PTRELA Q+ + L F+ N + GG G L + H++ TPGR+
Sbjct: 75 LVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLL 134
Query: 636 DMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEM 815
D +++ + ++ LV+DEAD ML+ GF + I DV R+ P + Q +L SAT P I +
Sbjct: 135 DHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAI 194
Query: 816 TSKFMTDPIRI 848
+ + DP+ I
Sbjct: 195 SGRVQRDPLAI 205
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 135 bits (326), Expect = 3e-30
Identities = 81/227 (35%), Positives = 124/227 (54%), Gaps = 14/227 (6%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F + L L+ + +++P+ IQ ++I I+ G+DV+A AQ+GTGKTA F++ +L
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 426 TL-----------DTT-LRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGT 563
L DT + T + L+L PTRELA Q+ I +V GG
Sbjct: 62 QLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGV 121
Query: 564 NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDV 743
++GE IR+L G H++ TPGR+ D++R+R L + LV DEAD ML+ GFK++I +V
Sbjct: 122 SIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEV 181
Query: 744 YRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGI 884
+ LP Q +L SATL +L + + + P I V + T I
Sbjct: 182 LKRLPSTRQTLLFSATLDDRMLSFSRRLLRSPQVIEVAQRNTTASSI 228
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 135 bits (326), Expect = 3e-30
Identities = 72/198 (36%), Positives = 118/198 (59%), Gaps = 2/198 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD--VIAQAQSGTGKTATFSISIL 422
F+ + L D +L I GFEKP+ IQ + ++P+ + ++AQA++G+GKTA+F+I ++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMK-VIPLFLNDEYNIVAQARTGSGKTASFAIPLI 66
Query: 423 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
+ ++ + +IL+PTRELA Q+ I +L N++ GG + I+ L
Sbjct: 67 ELVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALK-NA 124
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
++V GTPGR+ D I R L +++K +LDEADEMLN GF + + + +++L
Sbjct: 125 NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLF 184
Query: 783 SATLPHEILEMTSKFMTD 836
SAT+P EIL + K+M D
Sbjct: 185 SATMPREILNLAKKYMGD 202
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 135 bits (326), Expect = 3e-30
Identities = 71/221 (32%), Positives = 122/221 (55%), Gaps = 1/221 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+ L + L + G+E P+ IQ + I + GRD++A A +G+GKTA F + ++
Sbjct: 205 FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMR 264
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILAL-GDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+ LIL+PTRELA QI++ L ++ +GG L + +L
Sbjct: 265 ALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVK 324
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
V+ TPGR+ D+I++ + +K++V+DEAD ML GF++Q+ D+ +P Q +L+S
Sbjct: 325 VIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVS 384
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
AT+P I ++ S+ + +P+RI+ L ++Q + VE
Sbjct: 385 ATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVE 425
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 134 bits (325), Expect = 4e-30
Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 1/223 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-Q 425
F S+ L LL+ + GF +P+ IQ +I P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+D T+ L+++PTRELA QI + + L + A GG ++ G
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
V+ GTPGR+ D R + ++ LVLDEAD ML+ GF I + +++P Q + S
Sbjct: 123 VLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQTLFFS 182
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
AT+P I + + + +P + + R GI Q V +E
Sbjct: 183 ATMPAPIGVLAREMLRNPATVNINRIAAPAAGITQAVYPVAQE 225
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 134 bits (325), Expect = 4e-30
Identities = 70/201 (34%), Positives = 114/201 (56%), Gaps = 8/201 (3%)
Frame = +3
Query: 252 DSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL 431
D+ G+ + ++ + G + IQQ + P + G+DV+ +A++GTGKT FS+ +++ L
Sbjct: 28 DNFGMSETTVQALRKRGVDALFPIQQAVLRPAMDGQDVVGRARTGTGKTLAFSLPVIEKL 87
Query: 432 DTT--------LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 587
+ R + ++L+PTRELA Q++ I ++ C GGT +G+ K
Sbjct: 88 LSNGRGSGGRGYRNPKCIVLAPTRELAKQVENEIFITAPTLDTAC--VYGGTPIGQQESK 145
Query: 588 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 767
L G +V GTPGR+ D++ RR L I+ +VLDEAD+MLN GF+E + + P
Sbjct: 146 LRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVLDEADQMLNVGFEEDVEAILHDCPAGR 205
Query: 768 QVVLISATLPHEILEMTSKFM 830
Q L SAT+P + ++T KF+
Sbjct: 206 QTFLFSATMPQWVKQITKKFL 226
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 134 bits (325), Expect = 4e-30
Identities = 75/241 (31%), Positives = 134/241 (55%), Gaps = 3/241 (1%)
Frame = +3
Query: 189 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 368
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 369 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 548
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI++ + + +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSV 122
Query: 549 CIGGTNLGEDIRKLDYGQ---HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKG 719
+GG+ + +D Q +V GTPGR+ +++ + + VLDEAD+++++
Sbjct: 123 YVGGS--AHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEV 180
Query: 720 FKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXV 899
F++ I + LP QV + SAT P + + S F+ D + D++ L GIKQ+ V
Sbjct: 181 FRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRDAALVRFNADDVQLFGIKQYVV 240
Query: 900 A 902
A
Sbjct: 241 A 241
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 134 bits (325), Expect = 4e-30
Identities = 73/223 (32%), Positives = 127/223 (56%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F +G+ D +LR I FE+P+ IQ+ +I I++G+D+I A +G+GKT F I+Q
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
++ + L+L+PTRELA Q+Q + ++ GG + IR+L+
Sbjct: 63 KIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLERADV 121
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 785
VV+ TPGR+ D I R + +++LVLDEAD ML+ GF + + ++ P Q ++ S
Sbjct: 122 VVA-TPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMMFS 180
Query: 786 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
AT+ +I ++SK+M +P ++ K + + +KQ + V ++
Sbjct: 181 ATVSKDIQYLSSKYMNNPSKVFAKA-YVDSDKLKQVYIDVPKK 222
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 134 bits (324), Expect = 5e-30
Identities = 78/228 (34%), Positives = 125/228 (54%), Gaps = 4/228 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F+ +G+ LL I G+EKP+ IQ R+I I+ DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 426 ----TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
T D R + L+++PTREL+ QI + + + M + +GG +L + L
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILK 121
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G +V TPGRV + + + L +++ VLDEAD ML+ GF ++I ++ LP Q
Sbjct: 122 EGVDIVIATPGRVLEHVDKG-LSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKRHQT 180
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
+L SAT ++ +++ +T P I + T++ I Q V+ E+
Sbjct: 181 LLFSATFSDKVRKLSKLILTKPAFIETSKKNSTVDTINQVAYLVDTEK 228
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 134 bits (324), Expect = 5e-30
Identities = 77/225 (34%), Positives = 123/225 (54%), Gaps = 3/225 (1%)
Frame = +3
Query: 225 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 404
+D + TF + L ++ + I G+E P+ IQ +I P + GRDV+ AQ+GTGKTA+
Sbjct: 5 QDWTPMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTAS 64
Query: 405 FSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 575
F++ ++ L R + L+L PTRELA Q+ + + + IGG + E
Sbjct: 65 FTLPMITMLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKE 124
Query: 576 DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 755
+ +D G V+ TPGR+ D R L +K++V+DEAD ML+ GF I ++ +
Sbjct: 125 QEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLV 184
Query: 756 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
P Q + SAT+ EI +T+ F+++P +I V+R T I+Q
Sbjct: 185 PFTRQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQ 229
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 134 bits (324), Expect = 5e-30
Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 24/251 (9%)
Frame = +3
Query: 234 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 413
E +P FD +GL DE+LR I G+ P+ +Q SI +++GRD++A AQ+GTGKTA F +
Sbjct: 43 ENLPAFDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLL 102
Query: 414 SILQTLD-----TTLRETQ-------------------VLILSPTRELATQIQKVILALG 521
+ L+ +RE +L+++PTRELA QI +V +
Sbjct: 103 PTMNNLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRELAQQIDEVAGKIA 162
Query: 522 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEAD 701
D +GG + L YG ++ TPGR+ D+I + +K+LVLDEAD
Sbjct: 163 DVTGHVAVTVVGGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEAD 222
Query: 702 EMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEG 881
ML+ GF + + R P Q +L SATL E + + ++DP R+ + T +
Sbjct: 223 RMLDMGFLPAVRRIVRETPAERQTLLFSATLDEEAVGEITDLVSDPARVEIAPATSTADT 282
Query: 882 IKQFXVAVERE 914
+ QF V E
Sbjct: 283 VDQFVFPVSIE 293
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 134 bits (324), Expect = 5e-30
Identities = 86/234 (36%), Positives = 130/234 (55%), Gaps = 3/234 (1%)
Frame = +3
Query: 201 SNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQA 377
++VEFD S F M L + +LRG+ F PS IQ R+I P+ K G D++ QA
Sbjct: 14 ADVEFDLSLQ------FSKMFLSEPVLRGLTRNNFTHPSPIQARAI-PLAKLGLDLLVQA 66
Query: 378 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACI 554
+SGTGKT F++ I + + + Q L + PTRE+A QI+ V+ +G N + + I
Sbjct: 67 KSGTGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFI 126
Query: 555 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 734
GG ++ +D + L VV GTPGR+ +I+ VL T IK+LVLDEAD ++ K ++
Sbjct: 127 GGLDISQDRKNLQSCSAVV-GTPGRINHLIKSNVLNTSQIKILVLDEADSLITGSLKPEV 185
Query: 735 YDVYRYLPPATQVVLISATLPHEILEMTSKFMTDP-IRILVKRDELTLEGIKQF 893
+ + LP Q V+ SAT + K++ D I + K++ L GI+QF
Sbjct: 186 DQIVKMLPTKRQTVVCSATYYNNRDRELLKYLNDKFIGVTPKKEVPVLHGIRQF 239
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 134 bits (324), Expect = 5e-30
Identities = 85/264 (32%), Positives = 139/264 (52%), Gaps = 5/264 (1%)
Frame = +3
Query: 114 YFKNLEAN*IRKMTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIY 293
+++ LE+ I MT E + R+ L +S FD V+ TF+ G +++ I
Sbjct: 192 FYEELES--ISGMTEQETTDYRQRLGIRVSG--FDVHRPVK---TFEDCGFSSQIMSAIK 244
Query: 294 TYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS-ILQTLDTTLRETQV---- 458
+EKP+AIQ +++ ++ GRDVI A++G+GKTA F + I+ +D +
Sbjct: 245 KQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIG 304
Query: 459 LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD 638
+I +PTRELA QI ++ A GG + E ++L G +V TPGR+ D
Sbjct: 305 VICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLID 364
Query: 639 MIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMT 818
M++ + L LVLDEAD M + GF+ Q+ + + P Q +L SAT+P ++ ++
Sbjct: 365 MLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLA 424
Query: 819 SKFMTDPIRILVKRDELTLEGIKQ 890
+ ++DPIR+ V + E I Q
Sbjct: 425 REILSDPIRVTVGEVGMANEDITQ 448
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 134 bits (323), Expect = 6e-30
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Frame = +3
Query: 228 DVEVIPT----FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 395
DVE++P F + L +L+ + F++PS IQ +I I K +D+IA +Q+G+GK
Sbjct: 6 DVELLPQEPNGFITFNLDPLILKALDKMNFKEPSRIQTEAIPLIQKKQDLIALSQTGSGK 65
Query: 396 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 575
TAT +I I ++T L + Q LI+ PTRELA Q +G + V+ A GG +
Sbjct: 66 TATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGGEDSAL 125
Query: 576 DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 755
KL +G V+ TPGR+ D I R + ++ L+LDEADEML+ GF + + + + L
Sbjct: 126 QQSKLKHGVQVLVATPGRLIDFIYSRQIDLSHVETLILDEADEMLSMGFYDDLVFIIQCL 185
Query: 756 PPATQVVLISATLPHEILEMTSKFMTDP 839
+ Q +L SAT+P I + M DP
Sbjct: 186 NHSHQTLLFSATMPAAIQRLAKHHMKDP 213
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 134 bits (323), Expect = 6e-30
Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
Frame = +3
Query: 258 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT 437
M L + + + T + P+ IQ ++I +++G D+I AQ+GTGKTA F++ IL LD
Sbjct: 1 MQLSEAIQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDL 60
Query: 438 TLRET-----QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
QVL+LSPTRELA QI + G + + GG +R L G
Sbjct: 61 DRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGV 120
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
HV TPGR+ D++ + + K VLDEAD ML+ GF + + LP Q +
Sbjct: 121 HVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTIFF 180
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
+AT+P ++ ++ S + +P+RI V + T E ++Q
Sbjct: 181 TATMPPKVAQLASGLLNNPVRIEVAPESTTAERVEQ 216
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 134 bits (323), Expect = 6e-30
Identities = 71/216 (32%), Positives = 118/216 (54%), Gaps = 1/216 (0%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F + L L + F+ P+ IQ+++ I+ GRDV+ AQ+GTGKT + + +L+
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 426 TLD-TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L + + ++LI+ PTREL Q+ + I L ++N++ GG N+ + L G
Sbjct: 70 MLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDLMQGL 129
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
+V TP R++D++ RR ++ +SI+ V+DE D ML+ GFK Q+ ++ LP Q ++
Sbjct: 130 DIVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLDLGFKFQVNNIIELLPKNRQSIMF 189
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
SAT+ + EM P +I V LE I Q
Sbjct: 190 SATMTETVEEMIDTNFKAPEKISVAVSGTPLENIDQ 225
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 134 bits (323), Expect = 6e-30
Identities = 77/220 (35%), Positives = 126/220 (57%), Gaps = 3/220 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISILQ 425
+ + L +LL+GIY GF +PS IQ ++ I+ ++IAQA +G+GKTATF++++L
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGKTATFALAMLG 173
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
+DT + Q + L PTRELA Q Q V+ LG F + + G+ K G
Sbjct: 174 KVDTRIIHPQCMCLCPTRELARQNQDVVNELGKFTGITTWLVVA---QGDKYDK-TIGSQ 229
Query: 606 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLN--KGFKEQIYDVYRYLPPATQVVL 779
++ TPG++ D +++R T +K++V+DEADEM++ Q+ + ++ Q++L
Sbjct: 230 IIICTPGKMQDFLKKRSFPTEFMKLMVIDEADEMIDHRNMMASQVGQIRKFFRQNLQILL 289
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXV 899
SAT E+ K + + +I VK++ELTL I+QF V
Sbjct: 290 FSATYHEEVRLFAEKIVPNANKINVKKEELTLNTIQQFYV 329
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 134 bits (323), Expect = 6e-30
Identities = 80/218 (36%), Positives = 119/218 (54%), Gaps = 3/218 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF+ +GL L+ GF+ PS IQ +I I+KGRD+IA A++G+GKTA+F+I IL
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
L +IL+PTRELA QI + A+G MNV C IGG + LD H
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPH 124
Query: 606 VVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP--ATQVV 776
++ TPGR+ + + + + K LVLDEAD +L + F+ +I + +LPP Q +
Sbjct: 125 IIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLPPPEKRQTL 184
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
L SAT+ + ++ S + P T++ +KQ
Sbjct: 185 LFSATMTKNLTKLDSIALNKPFIFEDNSKYDTVDTLKQ 222
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 134 bits (323), Expect = 6e-30
Identities = 82/256 (32%), Positives = 140/256 (54%), Gaps = 1/256 (0%)
Frame = +3
Query: 150 MTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 329
M + ++ L +S V D + + V F MGL DELL+ IY GFEKPS IQ+
Sbjct: 20 MIKHDTTAIETGLDGSISGVGTDRGQKLLVAEHFSDMGLSDELLKAIYNQGFEKPSLIQK 79
Query: 330 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 509
+I I++G +V+ Q++SGTGKT ++ +L R TQV++++PTREL+TQ+ +VI
Sbjct: 80 SAIPHILRGHNVVVQSKSGTGKTIAYTCGVLGNTKIGER-TQVMVVTPTRELSTQVTEVI 138
Query: 510 LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 689
L + ++ + + + + I G+ VV G+PG + ++ L + +KM+VL
Sbjct: 139 SGLAGPLGIKVFSAL-KNKITDSI-----GEEVVVGSPGTILKLMELGKLNYKGVKMIVL 192
Query: 690 DEADEMLNKGFK-EQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDE 866
DEAD +L+K Q + + + + A Q++ SAT ++ + + D +++ +R+
Sbjct: 193 DEADILLDKDMMGTQTFRILKLISGA-QMIFFSATFSEQVKQTIEFYAPDAVKMYEERNG 251
Query: 867 LTLEGIKQFXVAVERE 914
E IK F + E E
Sbjct: 252 KPDE-IKLFYIEAEGE 266
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 134 bits (323), Expect = 6e-30
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 2/232 (0%)
Frame = +3
Query: 216 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 395
+T+ED E +F + L EL++ + KP+ IQ ++I P ++G D+I AQ+G+GK
Sbjct: 73 NTNED-ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGK 131
Query: 396 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 575
TA F+I IL L IL+PTRELA QI++ +LG M V+ +GG N+ +
Sbjct: 132 TAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMD 191
Query: 576 DIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRY 752
R L H++ TPGR+ D + + R +K LV+DEAD +L+ F + + +
Sbjct: 192 QARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKI 251
Query: 753 LPPATQVV-LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
+P + L SAT+ +I ++ +T+P++ V T++ + Q + V
Sbjct: 252 IPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVV 303
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 134 bits (323), Expect = 6e-30
Identities = 77/235 (32%), Positives = 133/235 (56%), Gaps = 13/235 (5%)
Frame = +3
Query: 225 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 404
E+ EV+ TF +G+R+EL++ G++ PS IQ ++ ++G+DVI AQ+G+GKT
Sbjct: 3 EENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGA 62
Query: 405 FSISILQTLDTTLRETQ------------VLILSPTRELATQIQKVILALGDFMNVQCHA 548
F+I ILQ L + +++ +LSPTRELA QI + ALG ++++C
Sbjct: 63 FAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAV 122
Query: 549 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVLDEADEMLNKGFK 725
+GG + + L HV+ TPGR++D M + +S+K LVLDEAD +LN+ F+
Sbjct: 123 LVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFE 182
Query: 726 EQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
+ + + +P + L SAT+ ++ ++ + +P++I T++ +KQ
Sbjct: 183 KSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQ 237
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 134 bits (323), Expect = 6e-30
Identities = 76/233 (32%), Positives = 130/233 (55%), Gaps = 5/233 (2%)
Frame = +3
Query: 234 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 413
++ F+S+ L +L+G+ + G+ KPS IQ +I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 414 SILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDI 581
I++ L + T+V++L PTRELA Q+ V + F++ + +GG NL +
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQE 347
Query: 582 RKLDYGQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 758
+ L +V TPGR D IR S+++LV+DEAD ML +GF++++ ++ LP
Sbjct: 348 QMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLP 407
Query: 759 PATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
Q +L SAT+ +I + S + P+RI++ + + Q V + + +
Sbjct: 408 SNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAATKLTQEFVRIRKRD 460
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 133 bits (322), Expect = 8e-30
Identities = 77/228 (33%), Positives = 125/228 (54%), Gaps = 5/228 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F ++G+ LL+G+ G +P IQ ++I ++G+D++ AQ+G+GKTA FS+ ILQ
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148
Query: 429 L----DTTLRET-QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
+ D +T + LIL+PTRELA QI++ I + ++ +GG + I+++
Sbjct: 149 IIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRIA 208
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G V+ TPGR+ D++R ++ + LVLDEAD ML+ GF + + + Q
Sbjct: 209 PGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQT 268
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
L SAT+P EI + + + DP+R+ V T I Q V +E
Sbjct: 269 ALFSATMPKEIASLAERLLRDPVRVEVAPQGATASEITQVVHPVPTKE 316
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 133 bits (322), Expect = 8e-30
Identities = 75/229 (32%), Positives = 120/229 (52%), Gaps = 6/229 (2%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF +GL L + GF P+ IQQ++I +++GRDV+A AQ+GTGKTA + + ++Q
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 426 TLDTTLRET------QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 587
L RE + LIL+PTRELA Q+ + + GGT++ +
Sbjct: 64 MLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQ 123
Query: 588 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 767
L G ++ TPGR+ D + + ++MLVLDEAD ML+ GF I + + +P
Sbjct: 124 LAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPEER 183
Query: 768 QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVERE 914
Q +L SAT + + + M +P+ + V T + +KQ V+++
Sbjct: 184 QTLLFSATFETRVKALAYRLMKEPVEVQVAAANSTADTVKQMVYPVDKK 232
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 133 bits (322), Expect = 8e-30
Identities = 74/221 (33%), Positives = 121/221 (54%), Gaps = 3/221 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F ++GL +++L + G+ P+ IQ+++I ++ +DV+ AQ+GTGKTA F + +L
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPMLT 61
Query: 426 TLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
L+ R + LIL PTRELA Q+++ G + IGG + G+ KL
Sbjct: 62 ILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQKLNVALLIGGVSFGDQDAKLTR 121
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
G V+ TPGR+ D R L +++LV+DEAD ML+ GF I + + +P Q +
Sbjct: 122 GVDVLIATPGRLLDHTERGGLLLTGVELLVIDEADRMLDMGFIPDIERICKLVPFTRQTL 181
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXV 899
+AT+P EI +T F+ +P ++ V + T + Q V
Sbjct: 182 FFTATMPPEIRRITETFLHNPQKVEVSKPATTAVTVTQSQV 222
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 133 bits (322), Expect = 8e-30
Identities = 77/225 (34%), Positives = 124/225 (55%), Gaps = 10/225 (4%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F S+GL + L+R I G+ +P+ +QQR+I +++GRD++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 426 TL------DTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 575
L D + R + +VL+L+PTRELA Q+ +N GG +
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNP 121
Query: 576 DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 755
++ + G V+ PGR+ D+ + + +++LVLDEAD ML+ GF + V L
Sbjct: 122 QVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLARL 181
Query: 756 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
P Q +L SAT +I ++ K + +P RI V T+E I+Q
Sbjct: 182 PAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQ 226
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 133 bits (322), Expect = 8e-30
Identities = 78/226 (34%), Positives = 121/226 (53%), Gaps = 4/226 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF + L LLR T G++KP+ IQ I + GRD+ A A +G+GKTA F++ L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 426 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
L + T+VLIL+PTRELA QI +I L F +++C +GG ++ E L
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287
Query: 597 GQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
+V TPGR+ D +R + + + +L+LDEAD +L GF +I ++ R P Q
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQT 347
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
+L SAT+ E+ E+ + P+R+ G+ + V + R
Sbjct: 348 MLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRR 393
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 133 bits (321), Expect = 1e-29
Identities = 73/210 (34%), Positives = 122/210 (58%), Gaps = 3/210 (1%)
Frame = +3
Query: 234 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 413
E++ F ++L GI T G+ + IQ ++I I++GRDV+ AQ+GTGKTA +++
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYAL 69
Query: 414 SILQTL-DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG-TNLGEDIRK 587
+LQ L + + + LILSPTR+LA QI + G +++C GG N +
Sbjct: 70 PLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQL 129
Query: 588 LDYGQHVVSGTPGRVFDMIR-RRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 764
L G ++ PGR+ D+++ ++ + +K LVLDEAD + + GF++ IY + ++LPP
Sbjct: 130 LTGGVDIIVACPGRLLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPPR 189
Query: 765 TQVVLISATLPHEILEMTSKFMTDPIRILV 854
Q +L SAT+ +I + K + P+RI +
Sbjct: 190 RQNLLFSATMSADIRLLIDKVLHRPVRIQI 219
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 133 bits (321), Expect = 1e-29
Identities = 81/266 (30%), Positives = 137/266 (51%), Gaps = 5/266 (1%)
Frame = +3
Query: 141 IRKMTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSA 320
I K+T +V RK +S V + I +F +G +EL+R I GFEKP+
Sbjct: 33 ITKLTEQQVEKIRKEFEIKVSGVR-----PPKPIVSFGHLGFDEELMRQITKLGFEKPTQ 87
Query: 321 IQQRSILPIVKGRDVIAQAQSGTGKTATFS----ISILQTLDTTLRETQV-LILSPTREL 485
IQ +++ + GRD++ A++G+GKT ++ I IL + E + LIL+PTREL
Sbjct: 88 IQCQALPCGLSGRDIVGVAKTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTREL 147
Query: 486 ATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRT 665
Q+ N+ A +GG N E + L G ++ TPGR+ +MI+++
Sbjct: 148 CQQVYTESKRYAKIYNISVGALLGGENKHEQWKMLKAGVEILIATPGRLMEMIQKKATNL 207
Query: 666 RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIR 845
R +V+DEAD+M + GF++QI + + + P Q +L +ATL +I + + +P+
Sbjct: 208 RRCTYVVIDEADKMFSMGFEKQIRSIMQQIRPDRQTLLFTATLKKKIQNLVMDVLRNPVT 267
Query: 846 ILVKRDELTLEGIKQFXVAVEREEWK 923
I + + E I+Q + + +K
Sbjct: 268 IKIGGENQANEDIRQEPIIFKDSNFK 293
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 133 bits (321), Expect = 1e-29
Identities = 71/227 (31%), Positives = 126/227 (55%), Gaps = 4/227 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F L ++ + +KP+ IQ R I +KGRD+I Q+Q+GTGKT +F + I+Q
Sbjct: 4 FSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQN 63
Query: 429 LDTTLRETQVLILSPTRELATQIQK----VILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
++ L+E Q +I++PTRELA QI + +++ D+ ++ GG + I ++
Sbjct: 64 VNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDY--IKTSLITGGMDRERQIGRVKV 121
Query: 597 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 776
+V GTPGR+ D+ + + L+ +K ++DEAD+ML+ GF ++ + + LP Q++
Sbjct: 122 SPQIVIGTPGRILDLFKEQALKPHFVKHYIIDEADQMLDMGFLPEVDRIAQALPEKLQMM 181
Query: 777 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
+ SAT+P ++ K+M +P V + T + I V V+ +
Sbjct: 182 VFSATIPEKLQPFLKKYMNNPRYAHVDPKQQTAKKIVHHTVPVKHRD 228
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 133 bits (321), Expect = 1e-29
Identities = 78/243 (32%), Positives = 135/243 (55%), Gaps = 6/243 (2%)
Frame = +3
Query: 207 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 386
V D++ I +F+ M L +++ I + + +PS+IQ +++ + GRD++ A++G
Sbjct: 106 VSSDSTAAPGPIESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETG 165
Query: 387 TGKTATFSISILQ--TLDTTLRETQ---VLILSPTRELATQIQKVILALGDFM-NVQCHA 548
+GKTA F+I +LQ + +R L+L+PTRELA QI+K + A + +++
Sbjct: 166 SGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCI 225
Query: 549 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKE 728
+GGTN+ + +L G + TPGR D +++ I +VLDEAD ML+ GF+
Sbjct: 226 VVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEP 285
Query: 729 QIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
QI ++ R LP Q +L SAT+P EI + +++ +P+++ V + + Q V V
Sbjct: 286 QIREIMRSLPEKHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVSSPTTNVSQTLVKVS 345
Query: 909 REE 917
E
Sbjct: 346 GSE 348
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 133 bits (321), Expect = 1e-29
Identities = 78/245 (31%), Positives = 133/245 (54%), Gaps = 12/245 (4%)
Frame = +3
Query: 195 DLSNVEFDTSEDVEV----IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 362
D + T +D+++ + F + GL++ELLR + GFE P+ +Q S+ + G
Sbjct: 53 DFKEEQQPTGKDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQ 112
Query: 363 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 542
+I QA++GTGKTA F +++L T++T + + L+++ TRELA Q + L LG FM
Sbjct: 113 LICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVK 172
Query: 543 HACI--GGTNLGEDIRKLD-YGQHVVSGTPGRVFDMI-RRRVLRTRSIKMLVLDEADEML 710
C GG + +I+ ++ +V GTPGR+ D+I R+ L+ +K +LDEAD M+
Sbjct: 173 VECFYGGGEPVSVNIQTIETVKPQIVVGTPGRLKDLICERKALKVDRLKYFILDEADTMI 232
Query: 711 -NKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDP---IRILVKRDELTLE 878
+ ++ I D++ P Q + SAT +F+ D I +K ++L L+
Sbjct: 233 EDLNMRKDIQDIFLKSPQEKQFMAFSATFTESSRTSLKRFIADNKHIYEITIKPEQLFLD 292
Query: 879 GIKQF 893
+KQ+
Sbjct: 293 KLKQY 297
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 132 bits (320), Expect = 1e-29
Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 2/211 (0%)
Frame = +3
Query: 237 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 416
+I +FD +GL L+ G+ G KP+ IQ ++I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 417 ILQTLDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLGEDIRKL 590
I Q +DT+ RE Q +IL+PT ELA QI K I L+ ++V IG N+ I KL
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKL 120
Query: 591 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
HV+ G+ GR+ ++I+++ + +IK +V+DE D++L+ I DV + Q
Sbjct: 121 KEKPHVIVGSSGRILELIKKKKISAHTIKTIVVDEGDKLLDHSNLSSIKDVIKTTMRDRQ 180
Query: 771 VVLISATLPHEILEMTSKFMTDPIRILVKRD 863
+++ SAT+ + L + M D I K +
Sbjct: 181 LMVFSATINEKTLNVAKGLMKDAEFIKAKSE 211
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 132 bits (320), Expect = 1e-29
Identities = 73/219 (33%), Positives = 119/219 (54%), Gaps = 5/219 (2%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F + L LLR + G+ KP+ IQ +SI +++GRD++ AQ+GTGKTA+F++ +L
Sbjct: 9 FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHR 68
Query: 429 LDTTLRET-----QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
L T R +VL+L+PTREL +QI + V+ GG + ++ L+
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKALE 128
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G ++ PGR+ D+I + + ++ LVLDEAD+ML+ GF + I + LP
Sbjct: 129 EGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDRHT 188
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
VL SAT+P I + + +P ++ + T++ I Q
Sbjct: 189 VLFSATMPKSIAALVESLLRNPAKVEIAPPSSTVDRIAQ 227
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 132 bits (320), Expect = 1e-29
Identities = 75/179 (41%), Positives = 108/179 (60%), Gaps = 2/179 (1%)
Frame = +3
Query: 339 LPI-VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 515
+P+ ++GRD + QA++GTGKTA F + IL +L + LIL+PTRELA QI+
Sbjct: 3 IPVALQGRDCLIQAKTGTGKTAAFGLPILNSLK---EGEKALILAPTRELALQIRDNFRD 59
Query: 516 LGDFMNVQCHACIGGTNLGEDIRKLDYGQ-HVVSGTPGRVFDMIRRRVLRTRSIKMLVLD 692
++NV+ A GGT + D++ L G+ VV GTPGR+ D+I R L+T ++ VLD
Sbjct: 60 FARYLNVRTFAFYGGTKVFGDLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVLD 119
Query: 693 EADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL 869
E D ML+ FKE I +Y LP QV +SAT P E+ E++ ++ P I V+ EL
Sbjct: 120 EVDVMLDMNFKEDIDFIYSQLPEEKQVFFVSATFPKEVRELSHRYTKKPEFIKVESREL 178
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 132 bits (320), Expect = 1e-29
Identities = 77/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Frame = +3
Query: 141 IRKMTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSA 320
+ ++++ E S +K S S+ +S + +F L ELL I + + +P+
Sbjct: 64 VSELSNKEDLSTKKDQSSASSSSSTSSSSSPPSVQSFTEFDLVPELLESIQSLKYTQPTP 123
Query: 321 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 500
IQ +I ++G+D++ A++G+GKTA F+I ILQTL T + L+L+PTRELA QI+
Sbjct: 124 IQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIK 183
Query: 501 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIK 677
+ ALG M ++ IGG ++ E R L HV+ TPGR+ D + + + ++
Sbjct: 184 ETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLIDHLEHTKGFSLKKLQ 243
Query: 678 MLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV-LISATLPHEILEMTSKFMTDPIRILV 854
LV+DE D M++ + + I + + +P ++ L +AT+ EI E + + P+++ +
Sbjct: 244 YLVMDEVDRMIDLDYAKAIDQILKQIPSHQRITYLYTATMSREI-EKFKRSLNSPVQVEI 302
Query: 855 KRDELTLEGIKQ 890
+ E + +KQ
Sbjct: 303 VKLEKVPDKLKQ 314
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 132 bits (320), Expect = 1e-29
Identities = 71/225 (31%), Positives = 122/225 (54%), Gaps = 1/225 (0%)
Frame = +3
Query: 234 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 413
E TF +G+ D L G+ KP+ IQ +I ++GRD+I A++G+GKT F++
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 414 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
IL L T + L+L+PTRELA QI + ALG + VQ +GG + L
Sbjct: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALA 140
Query: 594 YGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
H++ TPGR+ D + + R++K LV+DEAD +LN F+ ++ + + +P +
Sbjct: 141 KKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK 200
Query: 771 VVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
L SAT+ ++ ++ + +P++ V T+E ++Q+ + +
Sbjct: 201 TFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFI 245
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 132 bits (319), Expect = 2e-29
Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 2/200 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F SM L +L+GI G++ P+ IQ+++I ++GRD++A A++G+GKTA F I + +
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 429 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L + + LILSPTRELA Q K I LG F ++ +GG N+ +
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNP 157
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
++ TPGR + L+ +I+ +V DEAD + GF EQI ++ LP + Q +L
Sbjct: 158 DILIATPGRFLHICIEMDLQLNNIEYVVFDEADRLFEMGFGEQINEIINRLPESRQTLLF 217
Query: 783 SATLPHEILEMTSKFMTDPI 842
SATLP +++ + DP+
Sbjct: 218 SATLPKLLVDFAKIGLNDPV 237
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 132 bits (319), Expect = 2e-29
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 3/215 (1%)
Frame = +3
Query: 225 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 404
E+V+ P F +GL + + R I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+
Sbjct: 217 EEVDDRPLFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTAS 276
Query: 405 FSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 575
F++ ++ L R + LIL PTRELA Q+ + + G ++ + IGG ++ +
Sbjct: 277 FTLPMMDILSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMND 336
Query: 576 DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 755
L G V+ TPGR+ D+ R L ++LV+DEAD ML+ GF + + L
Sbjct: 337 QRDVLSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLL 396
Query: 756 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKR 860
P Q + SAT+ EI + F+ +P I V +
Sbjct: 397 PHNRQTLFFSATMAPEIRRLADAFLQNPKEITVAK 431
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 132 bits (319), Expect = 2e-29
Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 29/259 (11%)
Frame = +3
Query: 201 SNVEFDTSEDVEV----------IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV 350
+ + FD ED+ V I +FD + L + + + ++KP+ +Q+ +I I+
Sbjct: 271 TGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIII 330
Query: 351 KGRDVIAQAQSGTGKTATFSISIL------------QTLDTTLRETQV---LILSPTREL 485
GRD++A AQ+G+GKTA F + IL Q+ R Q L+L+PTREL
Sbjct: 331 NGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTREL 390
Query: 486 ATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRT 665
ATQI + ++ GG N E +R+LD G H++ TPGR+ DMI R +
Sbjct: 391 ATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGL 450
Query: 666 RSIKMLVLDEADEMLNKGFKEQIYDVYRYL--PPA--TQVVLISATLPHEILEMTSKFMT 833
+I+ LVLDEAD ML+ GF+ QI + L PP Q ++ SAT P +I E+ S F++
Sbjct: 451 ENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLS 510
Query: 834 DPIRILVKRDELTLEGIKQ 890
+ I + V R T E I Q
Sbjct: 511 NYIFLAVGRVGSTSENITQ 529
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 132 bits (318), Expect = 3e-29
Identities = 75/234 (32%), Positives = 126/234 (53%), Gaps = 8/234 (3%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 419
+ +F +G+ L + + P+ IQ +I ++ GRDV+A A +G+GKTA F++ +
Sbjct: 8 VASFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPL 67
Query: 420 LQ------TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH--ACIGGTNLGE 575
LQ T + + + + L+L PTRELA Q+ L+ N Q A GG ++
Sbjct: 68 LQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 576 DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 755
++ L G V+ TPGR+ D++ L+ + LVLDEAD ML+ GF +++ V L
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVLEAL 187
Query: 756 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
P Q +L SAT P E+ +T+K + P+ ++ ++ + I+Q + V RE+
Sbjct: 188 PAKKQTLLYSATFPEEVRALTAKLLHQPLEYHLQSEQEST--IEQRVITVNREQ 239
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 132 bits (318), Expect = 3e-29
Identities = 79/234 (33%), Positives = 122/234 (52%), Gaps = 10/234 (4%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISIL 422
+F + L + L R + GF+ PS +Q + P+ + G DVIAQA+SGTGKT TF + L
Sbjct: 38 SFGDLQLDERLTRALRAAGFDAPSPVQLACV-PLGRFGCDVIAQAKSGTGKTMTFVVIAL 96
Query: 423 QTLDTTLRETQVLILSPTRELATQIQKVILAL--------GDFMN-VQCHACIGGTNLGE 575
+ +D R TQ L L+PTRE A Q + + + GD ++ +GG + E
Sbjct: 97 ERVDAGRRRTQALALAPTRECAVQTHECFVEMIEKFKDMDGDARGGIETCLLVGGLPVKE 156
Query: 576 DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 755
D +L HVV GTPGR M+ + ++L+LDEAD +L+ F+ + Y L
Sbjct: 157 DRARLASQPHVVVGTPGRTRQMLEEGSMACDGARLLILDEADALLSGTFERDVLFAYSML 216
Query: 756 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
P QV SAT +L + M P ++++ L+G++QF +E+E+
Sbjct: 217 PERKQVCAFSATYSKTLLGDLERLMRAPQKVMLCESTTALQGVRQFYSLIEKED 270
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 132 bits (318), Expect = 3e-29
Identities = 85/263 (32%), Positives = 134/263 (50%), Gaps = 8/263 (3%)
Frame = +3
Query: 126 LEAN*IRKMTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 305
+E IR+MT +EV + R E+L ++ + + I T+ G+ +++ + + +
Sbjct: 269 IETEEIRRMTKAEVKAYR----EELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEY 324
Query: 306 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQ---VLILS 470
KP++IQ ++I I+ GRDVI A++G+GKT F + + + + L E +IL+
Sbjct: 325 SKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILA 384
Query: 471 PTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR 650
PTRELA Q K + ++ GG + E I L G +V TPGR+ D++
Sbjct: 385 PTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAA 444
Query: 651 ---RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTS 821
+V R + LVLDEAD M +KGF+ QI V + P Q VL SAT P + +
Sbjct: 445 NSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALAR 504
Query: 822 KFMTDPIRILVKRDELTLEGIKQ 890
K + P+ ILV + I Q
Sbjct: 505 KVLDKPVEILVGGKSVVCSDITQ 527
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 131 bits (317), Expect = 3e-29
Identities = 67/202 (33%), Positives = 116/202 (57%), Gaps = 3/202 (1%)
Frame = +3
Query: 243 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 422
PTF +GL + ++R + G P IQ +I + G+D++ + ++G+GKT +F + L
Sbjct: 61 PTFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTL 120
Query: 423 QTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 593
TL T + + +IL+PTRELA Q+ + GD + ++ GGT++G I L+
Sbjct: 121 ATLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALE 180
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
G V+ TPGR+ D+I R ++++ VLDEAD+M + GF ++ ++ +P Q
Sbjct: 181 RGVDVLVATPGRLRDIINRGACSLENVQIAVLDEADQMSDLGFLPEVTELLDQVPAGGQR 240
Query: 774 VLISATLPHEILEMTSKFMTDP 839
+L SAT+ +EI + +++ DP
Sbjct: 241 MLFSATMENEIKTLVDRYLKDP 262
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 131 bits (317), Expect = 3e-29
Identities = 72/220 (32%), Positives = 122/220 (55%), Gaps = 3/220 (1%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+ L+ ++ ++ GF +P+ IQ+R I ++K VI Q+Q+GTGKT + + +L
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNK 65
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALG---DFMNVQCHACIGGTNLGEDIRKLDYG 599
+D QV+I +PTRELA QI + L + + ++ IGGT+ + I KL
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQ 125
Query: 600 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 779
H+V GTPGR+ D+I+ + L + LV+DEAD ML+ GF + + +P Q+++
Sbjct: 126 PHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPEDLQMLV 185
Query: 780 ISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXV 899
SAT+P ++ K+M +P V+ ++T I+ +
Sbjct: 186 FSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILI 225
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 131 bits (316), Expect = 5e-29
Identities = 71/222 (31%), Positives = 123/222 (55%), Gaps = 2/222 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +GL +E+L+ + G E+P+ IQ+++I I+KG++VI +A++GTGKT + + I++
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEK 63
Query: 429 LDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
+D + E Q +ILSPT EL QI V+ L G + +G N+ + KL
Sbjct: 64 IDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKNKP 123
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
H++ GT GR+ ++I ++ + T +IK +V+DE D++L+ + + V + P TQ ++
Sbjct: 124 HILVGTTGRILELINKKKITTNTIKTIVIDEGDKLLDFINIKDVKSVVKSCPRDTQKLIF 183
Query: 783 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
SAT+ + LE + + I K E I+ VE
Sbjct: 184 SATMNEKALETADELIGTSELIQAKAANKVNENIEHGYFQVE 225
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 131 bits (316), Expect = 5e-29
Identities = 77/229 (33%), Positives = 129/229 (56%), Gaps = 1/229 (0%)
Frame = +3
Query: 207 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 386
VE D +D + PTF+ +G+ EL R G+++P+ IQ +I + G+D+I A++G
Sbjct: 30 VEEDDDKDDDT-PTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETG 88
Query: 387 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 566
+GKTA F+I ILQ L + LIL+PTREL+ QI++ +++LG + + +GG +
Sbjct: 89 SGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLD 148
Query: 567 LGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDV 743
+ +L H++ G+PGR+ D ++ + +IK LVLDEAD++L+ F + + +
Sbjct: 149 MVSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKI 208
Query: 744 YRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
LP L SAT+ +I ++ + PI+I V T E + Q
Sbjct: 209 ITSLPKDKVTYLYSATMTSKITKLQKVTLMKPIQINVNTKYHTSEHLIQ 257
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 131 bits (316), Expect = 5e-29
Identities = 71/202 (35%), Positives = 115/202 (56%), Gaps = 2/202 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F +MGL +L+ I G++ P+ IQ+++I I++GRDV+A A++G+GKT F I + +
Sbjct: 40 FQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIPLFEK 99
Query: 429 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L ++ + L+L+PTRELA Q K I LG F +++ +GG ++ +
Sbjct: 100 LKQREIKSGARALVLTPTRELAIQTFKFIKQLGKFTDLKTILVLGGDSMDSQFAAIHTLP 159
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
++ TPGR + L+ S++ V DEAD + GF EQ+ + R LP A Q+VL
Sbjct: 160 DIIVATPGRFLHLCVEMDLKLSSVQYCVFDEADRLFEMGFGEQLTETLRRLPEARQMVLF 219
Query: 783 SATLPHEILEMTSKFMTDPIRI 848
SATLP +++ ++DP I
Sbjct: 220 SATLPKLMVDFAKAGLSDPTLI 241
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 131 bits (316), Expect = 5e-29
Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 25/248 (10%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F L+ ELLR I GFE PS +QQ +I + G D++ QA+SG GKTA F +SILQ
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 429 LDTT----LRETQ----------------VLILSPTRELATQIQKVILALGDFM-NVQCH 545
LDT +++T+ L L+ TRELA QI+ ++ NV+C
Sbjct: 117 LDTNENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCE 176
Query: 546 ACIGGTNLGEDIR--KLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK- 716
GG ++ + I+ K D H++ GTPGR+ +IR + L T I+ VLDE D+ L K
Sbjct: 177 VVYGGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKL 236
Query: 717 GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQF 893
+ + ++ P QV+ SAT+ E+ ++ KF+ +P+ I + + +L L G+ Q
Sbjct: 237 DMRSDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQH 296
Query: 894 XVAVEREE 917
V ++ ++
Sbjct: 297 YVKLQEKD 304
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 131 bits (316), Expect = 5e-29
Identities = 81/272 (29%), Positives = 152/272 (55%), Gaps = 4/272 (1%)
Frame = +3
Query: 120 KNLEAN*IRKMTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTY 299
K + N + TSS + + +++ S+ + S++ T++ + + +EL++ +
Sbjct: 124 KEKKGNDLFSPTSSSIENNNNDNNKESSDFKLYHSKN-----TWEELKIDNELIQILTYL 178
Query: 300 GFEKPSAIQQRSILPIV--KGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSP 473
F PS IQ + LPI+ +++IAQ+Q+G+GKT TF I++L ++ TL Q + + P
Sbjct: 179 KFLGPSKIQAYA-LPIILSSNKNLIAQSQNGSGKTLTFVIAMLCKINRTLSSLQAVCICP 237
Query: 474 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 653
TREL+ Q V+ ++NV+ + L E K G + GTPG+ D ++R+
Sbjct: 238 TRELSQQNYDVVCNFTKYLNVKVFLAV---PLCERYNK-SGGYQIYVGTPGKTLDFLKRK 293
Query: 654 VLRTRSIKMLVLDEADEMLN--KGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKF 827
+ T++IK+ VLDEAD++++ Q+ + R+LP + Q++L SAT + + +F
Sbjct: 294 FIDTKNIKLFVLDEADDLIDIKNNMSSQVETIKRFLPRSCQILLFSATYNDSVRKFADQF 353
Query: 828 MTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
+I V++++LTL+ +KQ+ + E +E K
Sbjct: 354 APKATKISVRQEDLTLKCVKQYYLITENDEQK 385
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 131 bits (316), Expect = 5e-29
Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 10/261 (3%)
Frame = +3
Query: 171 SXRKILSE-DLSNVEFDTS--EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSIL 341
S RK L E D NV S + + + +F+ + L+ ELL GI + GF KPS+IQ+R++
Sbjct: 21 SLRKTLVETDPINVTIKQSNADPLYSVKSFEDLQLKSELLNGISSMGFRKPSSIQERALP 80
Query: 342 PIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 515
+++ +++IAQ+QSGTGKTATF +++L +D Q L ++PTREL QI +V +
Sbjct: 81 MLLENQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAII 140
Query: 516 LGDFM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV-FDMIRRRVL--RTRSIKML 683
+ FM NV+ I G L DI + ++ GTPG + F L + +K+
Sbjct: 141 MSKFMNNVKITCAIKG--LSPDILEGQINSQIIIGTPGTLKFWTTDNSSLYFNPKKLKVF 198
Query: 684 VLDEADEML-NKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKR 860
VLDEAD ++ F + + Q++L SAT +++ F+ P +K
Sbjct: 199 VLDEADILIETPEFLNIAKRIKSKVTNNCQILLFSATYDERVMDFAHDFVPQPNEFSIKP 258
Query: 861 DELTLEGIKQFXVAVEREEWK 923
ELTL+ IKQF + ++ E K
Sbjct: 259 QELTLKNIKQFYIQMKSSEDK 279
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 131 bits (316), Expect = 5e-29
Identities = 84/245 (34%), Positives = 132/245 (53%), Gaps = 4/245 (1%)
Frame = +3
Query: 150 MTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 329
+TS S + E+ VE + + +FD + L + I F KP+ IQ
Sbjct: 83 LTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--FPKPTPIQA 140
Query: 330 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQVLILSPTRELATQIQK 503
+ ++ G+DV+ A++G+GKT F + + L D R QVL++SPTRELA+QI
Sbjct: 141 VAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYD 200
Query: 504 VILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKML 683
++ L D + +QC GG E +L Q VV+ TPGR+ D+++ + + L
Sbjct: 201 NLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKSQVVVA-TPGRLLDLLQEGSVDLSQVNYL 259
Query: 684 VLDEADEMLNKGFKEQIYDVYRYLPPA-TQVVLISATLPHEILEMTSKFMTDPIRILV-K 857
VLDEAD ML KGF+E I ++ R + Q ++ +AT P E+ E+ S FM +PI++ +
Sbjct: 260 VLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGN 319
Query: 858 RDELT 872
D+LT
Sbjct: 320 TDQLT 324
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 130 bits (315), Expect = 6e-29
Identities = 71/233 (30%), Positives = 131/233 (56%), Gaps = 4/233 (1%)
Frame = +3
Query: 237 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 416
++ +FD + + ++ G+ G + P+AIQ+ +I +K +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 417 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGD--FMNVQCHACIGGTNLGEDIRKL 590
I Q +D++ RETQ LIL+PT EL QI K I L + + IG N+ I KL
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVNIVRQIEKL 120
Query: 591 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
H++ G+ GRV ++I+R+ + + +IK +V+DEAD +L++ + DV + Q
Sbjct: 121 KEKPHIIVGSTGRVLELIKRKKISSHTIKTIVIDEADMLLDQNNLAGVKDVIKTTMRDRQ 180
Query: 771 VVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEG--IKQFXVAVEREEWK 923
+++ SA + + SK +T +++ DE+ + + +A +R++ K
Sbjct: 181 LMIFSAYMNQRAM-AESKELTKDAEVIIIEDEILVNPNITHLYLIAEQRDKMK 232
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 130 bits (315), Expect = 6e-29
Identities = 78/236 (33%), Positives = 128/236 (54%), Gaps = 14/236 (5%)
Frame = +3
Query: 183 ILSEDLSNVE-FDTSEDVEV----IPT----FDSMGLRDELLRGIYTYGFEKPSAIQQRS 335
+L+ + E F TS ++ + +PT F+ G D ++ I GF KP+AIQ +
Sbjct: 128 VLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQG 187
Query: 336 ILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----VLILSPTRELATQIQ 500
+ GRD++ AQ+G+GKT + + + ++ R + L+L+PTRELA QIQ
Sbjct: 188 WPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQ 247
Query: 501 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 680
+V + G +V+ GG G+ R L+ G +V TPGR+ D + R +
Sbjct: 248 QVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTY 307
Query: 681 LVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRI 848
LVLDEAD ML+ GF+ QI + + + P QV++ SAT P E+ ++ +F+ + I++
Sbjct: 308 LVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQV 363
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 130 bits (315), Expect = 6e-29
Identities = 81/240 (33%), Positives = 127/240 (52%), Gaps = 5/240 (2%)
Frame = +3
Query: 219 TSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 395
T++DV+ F S+GL+ ELL G+ GF++ + +Q+ +I I+ RDV+A+A++GTGK
Sbjct: 12 TTDDVKGSGVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGK 71
Query: 396 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM---NVQCHACIGGTN 566
T +F I ILQ ++ Q L+L TRELA Q KV L M + IGG +
Sbjct: 72 TGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIGGVS 131
Query: 567 LGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVY 746
+ ED + VV TPGR+ +I +L R ++VLDEAD +L++ F I +
Sbjct: 132 IAEDRERAREKPLVVLATPGRLQQLIDEEILNFRDCSIVVLDEADMLLSQNFIRSIENCL 191
Query: 747 RYLP-PATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
Q + SAT + + E K + DP + +D L L G+ Q+ ++ + +K
Sbjct: 192 AACSNKRRQTLFFSATFSNSLKEFCDKHLRDPEYVNAMQDSLLLRGVTQYVCMLKEDRYK 251
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,068,734,680
Number of Sequences: 1657284
Number of extensions: 20191862
Number of successful extensions: 53361
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 49261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51836
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 136058751024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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