Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_F18
(1320 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 396 e-111
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 351 1e-97
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 169 1e-42
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 163 5e-41
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 153 5e-38
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 143 6e-35
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 136 8e-33
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 127 4e-30
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 126 5e-30
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 124 3e-29
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 120 6e-28
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 118 2e-27
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 116 6e-27
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 113 4e-26
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 109 6e-25
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 109 8e-25
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 102 1e-22
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 95 3e-20
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 83 6e-17
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 81 3e-16
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 76 1e-14
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 74 5e-14
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 63 7e-11
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 42 3e-04
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 30 0.82
SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 29 1.9
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 5.8
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 27 5.8
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 27 7.6
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 396 bits (976), Expect = e-111
Identities = 190/297 (63%), Positives = 233/297 (78%), Gaps = 2/297 (0%)
Frame = +3
Query: 192 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 371
E + NVE TSEDV + +F+ M L+++LLRGIY YG+E PSA+Q R+I+ I KGRDVIA
Sbjct: 4 EIMENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIA 63
Query: 372 QAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHAC 551
QAQSGTGKTATFSI ILQ++D ++R+TQ LILSPTRELA QIQ V+LALGD MNVQCHAC
Sbjct: 64 QAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHAC 123
Query: 552 IGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQ 731
IGGT++G DI+KLDYGQHVVSGTPGRV DMIRRR LRTR++KML+LDEADE+LN+GFKEQ
Sbjct: 124 IGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQ 183
Query: 732 IYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
IYD+YRYLPP TQVV++SATLP ++LEMT+KF T+P+RILVKRDELTLEG+KQ+ +AVE+
Sbjct: 184 IYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEK 243
Query: 912 EEWKXXXXXXXXXXXXXXKQYIW-*YKEXGDWLXQXMQRQFHCQLNARGH-AXKERD 1076
EEWK + I+ + DWL + M+ + G KERD
Sbjct: 244 EEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERD 300
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 351 bits (864), Expect = 1e-97
Identities = 166/244 (68%), Positives = 206/244 (84%)
Frame = +3
Query: 192 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 371
+ L + +T+ D EVI TFD M L+ ELLRGIY YGFE+PSAIQQR+I+PI+ RDV+A
Sbjct: 3 DQLEDSVIETNYD-EVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLA 61
Query: 372 QAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHAC 551
QAQSGTGKTATFSIS+LQ +DT+L++ Q LIL+PTRELA QIQKV++ALGD MNV+CHAC
Sbjct: 62 QAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHAC 121
Query: 552 IGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQ 731
IGGT + +D+ L G HVV GTPGRV DMI+RR L T +++M VLDEADEML++GFK+Q
Sbjct: 122 IGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQ 181
Query: 732 IYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVER 911
IYD+++ LPP QVVL+SAT+P ++LE+T+KFM DPIRILVK+DELTLEGIKQF VAVE+
Sbjct: 182 IYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEK 241
Query: 912 EEWK 923
EEWK
Sbjct: 242 EEWK 245
Score = 30.3 bits (65), Expect = 0.62
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 973 IFGNTKRXVTG-SHRXCRGNFTVSSMXGDM-PXKRETXFXXFR 1095
IF NT+R V + + +FTVSSM GDM +R+T FR
Sbjct: 263 IFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFR 305
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 169 bits (410), Expect = 1e-42
Identities = 93/223 (41%), Positives = 128/223 (57%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F+ L+ ELL GI+ GFE+PS IQ+ SI + GRD++A+A++GTGKTA F I L+
Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEK 105
Query: 429 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 608
+DT + Q LIL PTRELA Q +V LG MNV+ GGT L +DI +L+ H+
Sbjct: 106 VDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHI 165
Query: 609 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 788
V GTPGRV D+ + V V+DEAD++L+ F I + Y P Q+ L SA
Sbjct: 166 VVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSA 225
Query: 789 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVEREE 917
T P + K + P I + DELTL G+ Q+ V+ +
Sbjct: 226 TFPLIVKNFMDKHLNKPYEINL-MDELTLRGVTQYYAFVDESQ 267
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 163 bits (396), Expect = 5e-41
Identities = 90/245 (36%), Positives = 150/245 (61%), Gaps = 3/245 (1%)
Frame = +3
Query: 198 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG--RDVIA 371
L++++ D + + + +F+ + L+ ELL+GIY+ F+KPS IQ++++ ++ R++I
Sbjct: 99 LADLQADPNSPLFSVKSFEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIG 158
Query: 372 QAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHAC 551
Q+QSGTGKTA F++++L +D ++ + Q + L+P+RELA QI V+ +G + V+
Sbjct: 159 QSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVK--TA 216
Query: 552 IGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLN-KGFKE 728
G + K+D +V GTPG V D+++RR L R IK+ VLDEAD ML+ +G +
Sbjct: 217 FGIKDSVPKGAKID--AQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGD 274
Query: 729 QIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAVE 908
Q + LP TQ+VL SAT + + +F + I +K +EL++EGIKQ + +
Sbjct: 275 QSMRIKHLLPRNTQIVLFSATFSERVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQ 334
Query: 909 REEWK 923
EE K
Sbjct: 335 SEEHK 339
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 153 bits (371), Expect = 5e-38
Identities = 87/223 (39%), Positives = 130/223 (58%), Gaps = 6/223 (2%)
Frame = +3
Query: 264 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 443
L+ ELLR I GFE PS +QQ I + G DV+ QA+SG GKTA F +S LQ ++
Sbjct: 58 LKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQIEPVD 117
Query: 444 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDI---RKLDYGQHVV 611
E VL+L TRELA QI+ ++ +V+ GG N+ +D+ + H+V
Sbjct: 118 GEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIV 177
Query: 612 SGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISA 788
TPGR+ ++R ++L+ S+K VLDE D++L + I +V+R PP QV++ SA
Sbjct: 178 VATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSA 237
Query: 789 TLPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFXVAVERE 914
TL +EI + KFM +P+ I V + +LTL G++Q V +E +
Sbjct: 238 TLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLEEK 280
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 143 bits (346), Expect = 6e-35
Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 2/202 (0%)
Frame = +3
Query: 249 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 428
F SMGL LLR I+ GF+ P+ IQ+++I +++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 429 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 602
L +TL T+ LILSP RELA Q KV+ +++ A +GG +L E L
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKP 190
Query: 603 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 782
+V TPGR + L SI+ +V DEAD + GF Q+ ++ LP + Q +L
Sbjct: 191 DIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLF 250
Query: 783 SATLPHEILEMTSKFMTDPIRI 848
SATLP +++ + DP+ +
Sbjct: 251 SATLPRTLVDFAKAGLQDPVLV 272
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 136 bits (328), Expect = 8e-33
Identities = 75/224 (33%), Positives = 125/224 (55%), Gaps = 4/224 (1%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F SM L +L+G+ GFE P+ IQ ++I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 426 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 596
L + T+VLIL PTRELA Q V + F ++ CIGG +L ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 597 GQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 773
+V TPGR D +R + +I+++V+DEAD ML GF +++ ++ + P + Q
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQT 439
Query: 774 VLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFXVAV 905
+L SAT+ ++ ++ + P+R+ V + T + + Q V V
Sbjct: 440 MLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRV 483
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 127 bits (306), Expect = 4e-30
Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 6/232 (2%)
Frame = +3
Query: 240 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 419
+ TF+ G + +L+ + GFE P+ IQQ++ + GRD++ + +G+GKT ++ +
Sbjct: 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPA 180
Query: 420 L-----QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIR 584
+ Q L + VL+L+PTRELA QIQ+ G ++ GG G IR
Sbjct: 181 IVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIR 240
Query: 585 KLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 764
L G + TPGR+ DM+ R + LVLDEAD ML+ GF+ QI + + P
Sbjct: 241 DLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 300
Query: 765 TQVVLISATLPHEILEMTSKFMTDPIRILV-KRDELTLEGIKQFXVAVEREE 917
Q V+ SAT P E+ + ++ D I++ V D IKQ V+ +
Sbjct: 301 RQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNAD 352
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 126 bits (305), Expect = 5e-30
Identities = 73/235 (31%), Positives = 125/235 (53%), Gaps = 1/235 (0%)
Frame = +3
Query: 189 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 368
SE S S++ E TF +G+ DEL GF+ P+ IQQ +I ++ RDVI
Sbjct: 28 SEKSSENNNGDSQNNEAPKTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVI 87
Query: 369 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 548
AQ+G+GKTA F++ ++Q L ++L+PTRELA QI + A+G + V+
Sbjct: 88 GLAQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVV 147
Query: 549 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFK 725
+GG ++ L HV+ TPGR+ D + + +++K L++DEAD +L+ F
Sbjct: 148 IVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFG 207
Query: 726 EQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 890
I + + +P + +L SAT+ ++ ++ + P+R+ V T++ + Q
Sbjct: 208 PIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQ 262
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 124 bits (299), Expect = 3e-29
Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 8/246 (3%)
Frame = +3
Query: 156 SSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRS 335
+ E + R I ++S + +SE++ I FD + + +L G+ Y ++P+ IQ +
Sbjct: 138 NDEEAYDRYIKKHNISFADPKSSENLLPILQFDELDVSAKLREGLKNY--KEPTPIQAAT 195
Query: 336 ILPIVKGRDVIAQAQSGTGKTATFSISILQTLD---TTLRETQVLILSPTRELATQIQKV 506
++ GRDV+ A++G+GKT F I LQ L+ +VL++SPTRELA Q +
Sbjct: 196 WPYLLAGRDVVGIAETGSGKTVAFGIPALQYLNGLSDNKSVPRVLVVSPTRELAIQTYEN 255
Query: 507 ILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLV 686
+ +L N++ GG E R V+ GTPGR+ D+I + + LV
Sbjct: 256 LNSLIQGTNLKAVVVYGGAPKSEQARAAKNAS-VIIGTPGRLLDLINDGSIDCSQVGYLV 314
Query: 687 LDEADEMLNKGFKEQIYDVYRYLPPAT-----QVVLISATLPHEILEMTSKFMTDPIRIL 851
LDEAD ML+ GF++ I ++ + P T Q V SAT P + + + F+ DP++I
Sbjct: 315 LDEADRMLDTGFEQDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKIT 374
Query: 852 VKRDEL 869
+ DEL
Sbjct: 375 IGSDEL 380
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 120 bits (288), Expect = 6e-28
Identities = 80/274 (29%), Positives = 135/274 (49%), Gaps = 8/274 (2%)
Frame = +3
Query: 126 LEAN*IRKMTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 305
+E ++ ++ +EV R L ++ + + + ++ GL + + I + G+
Sbjct: 383 VEPEELKNLSPAEVDELRA----SLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSLGY 438
Query: 306 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQ---VLILS 470
EKP++IQ ++I I GRDVI A++G+GKT F + + + + L+ + +I++
Sbjct: 439 EKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMT 498
Query: 471 PTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR 650
PTRELA QI + +N++ GG + + I L G +V TPGR+ D++
Sbjct: 499 PTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSA 558
Query: 651 ---RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTS 821
RV LVLDEAD M + GF+ Q+ + + P Q VL SAT P + +
Sbjct: 559 NAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALAR 618
Query: 822 KFMTDPIRILVKRDELTLEGIKQFXVAVEREEWK 923
K + P+ I V + ++Q V V EE K
Sbjct: 619 KVLKKPVEITVGGRSVVASEVEQI-VEVRPEESK 651
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 118 bits (284), Expect = 2e-27
Identities = 88/252 (34%), Positives = 126/252 (50%), Gaps = 22/252 (8%)
Frame = +3
Query: 228 DVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF 407
D+E + F S L LL+ I G+ +P+ +Q+ SI + GRD++A AQ+G+GKTA F
Sbjct: 164 DIEPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGF 223
Query: 408 SISIL--------------QTLDTTLRETQV----LILSPTRELATQIQKVILALGDFMN 533
IL Q R + LIL+PTREL QI +
Sbjct: 224 LFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSW 283
Query: 534 VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLN 713
V+ A GG ++ IR++D G ++S TPGR+ D+I R + +IK LVLDEAD ML+
Sbjct: 284 VRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLD 343
Query: 714 KGFKEQIYDVYRYLPPAT----QVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEG 881
GF+ QI + + Q ++ SAT P +I + F+ D + + V R T E
Sbjct: 344 MGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSEN 403
Query: 882 IKQFXVAVEREE 917
I Q V VE E
Sbjct: 404 ITQKVVHVEDSE 415
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 116 bits (280), Expect = 6e-27
Identities = 80/247 (32%), Positives = 135/247 (54%), Gaps = 9/247 (3%)
Frame = +3
Query: 204 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 383
N+ ++ D+E F + L + + + I GFE + IQ+RSI P++ GRDV+ A++
Sbjct: 79 NLNASSTSDIE---KFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKT 135
Query: 384 GTGKTATF---SISILQTLDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHAC 551
G+GKT F +I +L L R T V+I+SPTRELA QI V L + +
Sbjct: 136 GSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIV 195
Query: 552 IGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKE 728
IGG N + KL G +++ TPGR+ D ++ + R+++ LV+DEAD +L GF++
Sbjct: 196 IGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFED 255
Query: 729 QIYDVYRYLPPAT-QVVLISATLPHEILEMTS-KFMTDPIRILVK--RDELTLEGIKQFX 896
++ + + LP Q +L SAT ++ ++ P+ + V + T+EG++Q
Sbjct: 256 EMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGY 315
Query: 897 VAVEREE 917
V V+ ++
Sbjct: 316 VVVDSDK 322
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 113 bits (273), Expect = 4e-26
Identities = 76/216 (35%), Positives = 111/216 (51%), Gaps = 9/216 (4%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
TF L L R I+ FEKP+++Q +I ++G+D++AQA++G+GKTA + I IL+
Sbjct: 15 TFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPILE 74
Query: 426 TL------DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 587
L D R L+L PTRELA Q+ V+ L F + TN + +++
Sbjct: 75 LLLKQKQIDENQRGIFALLLVPTRELAQQVYNVLEKLTAFCSKHIRFINVATNSSDTVQR 134
Query: 588 ---LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 758
LD +V TP R + VL +K LV+DEAD ML+ G+ E + + R LP
Sbjct: 135 PLLLDL-PDIVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLP 193
Query: 759 PATQVVLISATLPHEILEMTSKFMTDPIRILVKRDE 866
TQ L+SATL I + +P + VK E
Sbjct: 194 RGTQSFLMSATLSKNIASLQKLVCRNPFILAVKDKE 229
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 109 bits (263), Expect = 6e-25
Identities = 69/264 (26%), Positives = 133/264 (50%), Gaps = 27/264 (10%)
Frame = +3
Query: 180 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 359
+IL ED N+ + + ++ GL E+L+ + +++PS+IQ+ +I +++ +
Sbjct: 229 RILKEDY-NISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRK 287
Query: 360 DVIAQAQSGTGKTATFSISILQTLDTT--LRETQV------LILSPTRELATQIQKVILA 515
D+I A++G+GKTA F I ++ + L E+ + ++L+PTRELA QIQ
Sbjct: 288 DLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNK 347
Query: 516 LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDE 695
+ + +C + +GG E ++ G H+V TPGR+ D + RR+ +V+DE
Sbjct: 348 FAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDE 407
Query: 696 ADEMLNKGFKEQIYDVYRYLPPAT-------------------QVVLISATLPHEILEMT 818
AD ML+ GF++ + + LP + Q ++ SATLP + +
Sbjct: 408 ADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLA 467
Query: 819 SKFMTDPIRILVKRDELTLEGIKQ 890
++ +P+ + + ++ ++Q
Sbjct: 468 KSYLIEPVMLTIGNIGQAVDRVEQ 491
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 109 bits (262), Expect = 8e-25
Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 6/196 (3%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F +G+ L+ + +P+ IQ+ I I++GR+ I A++G+GKTA F++ I++
Sbjct: 8 SFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPIIE 67
Query: 426 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 605
LIL+PTRELA QI + ALG +N++ +GG ++ L H
Sbjct: 68 KWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDLSKRPH 127
Query: 606 VVSGTPGRVFDMIR----RRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA--T 767
VV TPGR+ D+IR + R IK LV+DEAD +L+ F + + D + LP +
Sbjct: 128 VVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASEDR 187
Query: 768 QVVLISATLPHEILEM 815
Q +L +AT+ I ++
Sbjct: 188 QTLLFTATVTDAIRQL 203
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 102 bits (245), Expect = 1e-22
Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 7/254 (2%)
Frame = +3
Query: 177 RKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG 356
RK E++ + E + F + L + F + IQ++ I +KG
Sbjct: 17 RKEEEEEIEELNSQIEALSETVDHFAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKG 76
Query: 357 RDVIAQAQSGTGKTATFSISILQTLD----TTLRETQVLILSPTRELATQIQKVILALGD 524
RD++ A++G+GKT F + +++ L T+L L++SPTRELA Q + ++ +G
Sbjct: 77 RDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGR 136
Query: 525 FMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEAD 701
+ IGG N E+ +L +++ TPGR+ I + V T ++ML+LDEAD
Sbjct: 137 LHSFSAGLIIGGNNYKEEKERLSR-MNILVCTPGRLLQHIDQAVNFDTSGLQMLILDEAD 195
Query: 702 EMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL--TL 875
+L+ GF+ + + LP Q +L SAT + ++ + +P I V ++ T
Sbjct: 196 RILDMGFRTTLDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTP 255
Query: 876 EGIKQFXVAVEREE 917
+ QF + V E
Sbjct: 256 SNLNQFYLTVPLTE 269
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 94.7 bits (225), Expect = 3e-20
Identities = 76/236 (32%), Positives = 112/236 (47%), Gaps = 8/236 (3%)
Frame = +3
Query: 147 KMTSSEVSSXRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 326
K+TS + + ED N S V+V + L E+L + GF KP IQ
Sbjct: 96 KVTSKNYNEFSTLEEEDEHN-----SHGVDV-SAWAHFSLSPEMLGSLSKAGFSKPMPIQ 149
Query: 327 QRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQVLILSPTRELATQIQ 500
I G D+I +A +G+GKT F I IL+ + + Q L+++PTRELA QI
Sbjct: 150 SLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTRELAHQIC 209
Query: 501 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVL--RTRSI 674
+ + N++ + GG + + R L+ HVV TPGR++ +I L + I
Sbjct: 210 QHFELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFKKI 269
Query: 675 KMLVLDEADEMLNKGFKEQIYDVYRYL--PPAT--QVVLISATLPHEILEMTSKFM 830
K LVLDEAD +L K E++ + L P T Q + SAT + + K M
Sbjct: 270 KCLVLDEADRLLQKSHFEELSKLLEILGNPMHTQRQTFIFSATFDEGLQQRLKKNM 325
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 83.4 bits (197), Expect = 6e-17
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Frame = +3
Query: 246 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 425
+F S+ + L + GF+K + +Q +I +K +D++ +A +G+GKT + +
Sbjct: 2 SFQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCFD 61
Query: 426 TL---DTTLRETQVLILSPTRELATQI---QKVILA-----LGDFMNVQCHACIGGT-NL 569
+ DT LI++PTRELATQI K +LA L + IGG L
Sbjct: 62 KVTRRDTDETGLGALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGTL 121
Query: 570 GEDIRKL-DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVY 746
D+ + VV GTPGR+ +M+ + ++ +++L+LDEAD +++ GF+ + +
Sbjct: 122 TNDLASFREKNPSVVIGTPGRLNEMLSH--ISSKHLEILILDEADTLIDMGFQRTLQSII 179
Query: 747 RYLPPATQVVLISATL 794
LP + L SAT+
Sbjct: 180 SQLPKQRRTGLFSATM 195
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 81.4 bits (192), Expect = 3e-16
Identities = 62/218 (28%), Positives = 112/218 (51%), Gaps = 12/218 (5%)
Frame = +3
Query: 300 GFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQTL---DTTLRETQV--L 461
GFEK + +QQR + + + + QA++GTGKT F + + + L +++ +
Sbjct: 57 GFEKMTPVQQRVLNEVFPNEENAVVQAKTGTGKTLAFLLVAFKDVLKGKPRLNSSKIHSV 116
Query: 462 ILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ-HVVSGTPGRVFD 638
ILSPTRELA QI + L ++ IGG + + + G +++ TPGR+ D
Sbjct: 117 ILSPTRELALQIFEEARKLTYGTGIRVSYAIGGNSKMREENAIRRGNANLLIATPGRLED 176
Query: 639 MIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA-TQVVLISATLPHEILE 812
++ R+L + S +LDEAD +++ GF E I +++ + T+ + SAT+P ++
Sbjct: 177 HLQNPRILESLSTDSFILDEADRLMDMGFAESILNIHEAVTTTKTRKLCFSATMPPKVSN 236
Query: 813 MTSKFM-TD--PIRILVKRDELTLEGIKQFXVAVEREE 917
+ + TD I L + T E + QF + + ++
Sbjct: 237 VFRGILGTDFKLINCLDPNEPPTHERVPQFVIETKLDK 274
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 75.8 bits (178), Expect = 1e-14
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 15/195 (7%)
Frame = +3
Query: 312 PSAIQQRSILPIVK--GRDVIAQAQSGTGKTATFSISILQ-------TLDTTLRETQVLI 464
P+AIQ + ++ +D +AQ+G+GKT + + I+Q L T +I
Sbjct: 162 PTAIQSCCLPALLNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVI 221
Query: 465 LSPTRELATQIQKVILALGD----FMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 632
++PTREL QI V L + V C+ IGG + ++ G +++ GTPGR+
Sbjct: 222 MAPTRELCQQIYNVANKLNNNPLSHWIVSCNV-IGGEKKKSEKARIRKGVNILIGTPGRL 280
Query: 633 FDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP-HEI 806
D + L ++ +VLDE D +++ GF+E + + YL + ++ ++P ++
Sbjct: 281 ADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSIIKKDLSIPSRKV 340
Query: 807 LEMTSKFMTDPIRIL 851
+ S M D ++ L
Sbjct: 341 TMLCSATMKDTVKRL 355
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 73.7 bits (173), Expect = 5e-14
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 4/196 (2%)
Frame = +3
Query: 315 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL-RETQVLILSPTRELAT 491
+ IQ+ +I I RD++A A +G+GKT + ILQ L + + +I++PTREL
Sbjct: 70 TTIQRYAIPTIGSKRDLLACAPTGSGKTIAYLFPILQKLQLHVPGGYRAIIVAPTRELCE 129
Query: 492 QI--QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRT 665
QI Q L+ G + + + E KL + GTP R+ I+ L
Sbjct: 130 QIYRQAEKLSFGTSLKI-IELSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQTG-LSF 187
Query: 666 RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV-VLISATLPHEILEMTSKFMTDPI 842
++ V+DEAD + GF EQ + + L SAT+P + E+ DPI
Sbjct: 188 EKVEFFVMDEADRLFEPGFIEQTDHILSACTSSNICKSLFSATIPSRVEELAKVVTVDPI 247
Query: 843 RILVKRDELTLEGIKQ 890
RI+V + + I Q
Sbjct: 248 RIIVGLKDAATDSIDQ 263
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 63.3 bits (147), Expect = 7e-11
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Frame = +3
Query: 267 RDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQTLD-TT 440
+ + RG P +Q P+ G DV A +G+GKT ++ I I+Q L T
Sbjct: 143 KQNITRGFAVQAAVLPLLLQDGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSHRT 202
Query: 441 LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH----- 605
+ + +++ PTREL Q+ K +Q A G +L + +L+ ++
Sbjct: 203 VPRLRCVVIVPTRELTVQVAKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNGDENECRID 262
Query: 606 VVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQI 734
V+ TPGR+ D IR + ++ +V+DEAD +L++ F++ +
Sbjct: 263 VLVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWV 306
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 41.5 bits (93), Expect = 3e-04
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Frame = +3
Query: 255 SMGLRDELLRGIYTY-GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL 431
S L EL+ +YT EK Q +I + G VI + +GK+ + I ILQ+L
Sbjct: 292 SRPLSQELINALYTSRNIEKTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSL 351
Query: 432 DTTLRETQVLILSPTRELATQIQKVILALGDFM----NVQCHACIGGTNLGEDIRKLDYG 599
+ T + PT+ LA +K ++ + +M N++ G T L E +
Sbjct: 352 LEDNQSTAFFVF-PTKSLAQDQKKSLIDILSYMPTLKNIRVDTFDGDTPL-ESRESIIRS 409
Query: 600 QHVVSGTPGRVFDMIRRRVLR----TRSIKMLVLDEA 698
+++ P + I R +++K+ VLDEA
Sbjct: 410 ANIIFTNPDMLHQTILPNANRWYYFFKNLKLFVLDEA 446
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 29.9 bits (64), Expect = 0.82
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +3
Query: 594 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 770
YGQ+ + P + + +L + +V D+ D+ ++ E + ++RYLPP +
Sbjct: 467 YGQYDIRKDPHQNI-ALPDSMLSRFDLLFIVTDDIDDKKDRALSEHVLRMHRYLPPGVE 524
>SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 266
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = +3
Query: 693 EADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELT 872
E E + + + I +YRY + L + LP + S +T+P++ ++
Sbjct: 94 ENSEFTKENYAQMINSLYRYQDAILKSELKDSILPKLVNCACSVQLTEPLKAILANSRGE 153
Query: 873 LEGIKQFXVAVEREEWK 923
LE + + EE K
Sbjct: 154 LENSLLLRIQAQEEELK 170
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 229 MSKLYPLLTPWDFEMSYCEEYTHMVSKNLQQFSREASCL*SKAEM**LKHNLVQERLRHS 408
MS L L T + FE++ +++ +++K + F + ++ EM L HN+ Q R S
Sbjct: 1124 MSFLVTLQTTYSFELTLNYDFSELLTKVVFPFLSPVDTITAEQEMRDLLHNIRQPLPRSS 1183
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 645 RRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 758
RR L+ I V +A + ++ G + D YRY P
Sbjct: 458 RRSALKFTDIDYFVFSDASKYVSIGMSPYMRDTYRYTP 495
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 289 IPRNNSSRSPMESKVGITSTSSLVSNSTF 203
I +NN+ +SP++ +V ITS SS +TF
Sbjct: 41 IIQNNTRKSPLK-RVSITSESSFYKENTF 68
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,529,479
Number of Sequences: 5004
Number of extensions: 92035
Number of successful extensions: 332
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 723332792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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