Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_F17
(1375 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 40 0.003
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.022
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.022
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.067
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 34 0.27
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 33 0.36
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 32 0.82
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 32 0.82
Z81034-1|CAB02726.1| 194|Caenorhabditis elegans Hypothetical pr... 32 0.82
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.82
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.82
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.82
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.9
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.9
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.9
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.9
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 2.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 30 3.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 3.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.3
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 30 4.4
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 30 4.4
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 4.4
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 4.4
AL023834-2|CAA19479.2| 217|Caenorhabditis elegans Hypothetical ... 30 4.4
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 5.8
L14429-2|AAP68927.1| 229|Caenorhabditis elegans Hypothetical pr... 29 5.8
L14429-1|AAA28219.2| 575|Caenorhabditis elegans Hypothetical pr... 29 5.8
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 7.7
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 29 7.7
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 29 7.7
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 7.7
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 29 7.7
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 40.3 bits (90), Expect = 0.003
Identities = 33/123 (26%), Positives = 33/123 (26%), Gaps = 3/123 (2%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P G
Sbjct: 326 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP---SGGPPGPFDP 382
Query: 1126 PGXXP-XXPPG--XPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXX 1296
G P PPG P P P G PP G PP GG P
Sbjct: 383 SGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP-FNPSGAPPSGGPPGPFN 441
Query: 1297 PXG 1305
P G
Sbjct: 442 PSG 444
Score = 40.3 bits (90), Expect = 0.003
Identities = 29/120 (24%), Positives = 29/120 (24%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P
Sbjct: 386 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 445
Query: 1126 PGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P P P P P G PP G PP GG P P G
Sbjct: 446 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP-FDPSGAPPSGGPPGPFNPSG 504
Score = 40.3 bits (90), Expect = 0.003
Identities = 29/120 (24%), Positives = 29/120 (24%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 460
Query: 1126 PGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P P P P P G PP G PP GG P P G
Sbjct: 461 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP-FNPSGAPPSGGPPGPFDPSG 519
Score = 39.5 bits (88), Expect = 0.005
Identities = 33/123 (26%), Positives = 33/123 (26%), Gaps = 3/123 (2%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P G
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP---SGGPPGPFDP 277
Query: 1126 PGXXP-XXPPG--XPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXX 1296
G P PPG P P P G PP G PP GG P
Sbjct: 278 SGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGP-FNPSGAPPSGGPPGPFD 336
Query: 1297 PXG 1305
P G
Sbjct: 337 PSG 339
Score = 39.5 bits (88), Expect = 0.005
Identities = 33/123 (26%), Positives = 33/123 (26%), Gaps = 3/123 (2%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P G
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPP---SGGPPGPFDP 337
Query: 1126 PGXXP-XXPPG--XPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXX 1296
G P PPG P P P G PP G PP GG P
Sbjct: 338 SGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP-FDPSGAPPSGGPPGPFD 396
Query: 1297 PXG 1305
P G
Sbjct: 397 PSG 399
Score = 39.5 bits (88), Expect = 0.005
Identities = 33/123 (26%), Positives = 33/123 (26%), Gaps = 3/123 (2%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P G
Sbjct: 341 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPP---SGGPPGPFDP 397
Query: 1126 PGXXP-XXPPG--XPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXX 1296
G P PPG P P P G PP G PP GG P
Sbjct: 398 SGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP-FNPSGAPPSGGPPGPFN 456
Query: 1297 PXG 1305
P G
Sbjct: 457 PSG 459
Score = 39.5 bits (88), Expect = 0.005
Identities = 29/120 (24%), Positives = 29/120 (24%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P
Sbjct: 356 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 415
Query: 1126 PGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P P P P P G PP G PP GG P P G
Sbjct: 416 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP-FNPSGAPPSGGPPGPFNPSG 474
Score = 39.5 bits (88), Expect = 0.005
Identities = 29/120 (24%), Positives = 29/120 (24%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 430
Query: 1126 PGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P P P P P G PP G PP GG P P G
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP-FNPSGAPPSGGPPGPFDPSG 489
Score = 39.1 bits (87), Expect = 0.007
Identities = 29/120 (24%), Positives = 29/120 (24%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P
Sbjct: 146 PPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEA 205
Query: 1126 PGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P P P P P G PP G PP GG P P G
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP-FDPSGAPPSGGPPGPFNPSG 264
Score = 39.1 bits (87), Expect = 0.007
Identities = 33/123 (26%), Positives = 33/123 (26%), Gaps = 3/123 (2%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P G
Sbjct: 161 PPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPP---SGGPTGPFDP 217
Query: 1126 PGXXP-XXPPG--XPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXX 1296
G P PPG P P P G PP G PP GG P
Sbjct: 218 SGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP-FNPSGAPPSGGPPGPFD 276
Query: 1297 PXG 1305
P G
Sbjct: 277 PSG 279
Score = 37.5 bits (83), Expect = 0.022
Identities = 32/120 (26%), Positives = 32/120 (26%), Gaps = 3/120 (2%)
Frame = +1
Query: 955 GGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXXPGX 1134
GG P G P G P PP P G P G G
Sbjct: 314 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP---SGGPPGPFDPSGA 370
Query: 1135 XP-XXPPG--XPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P PPG P P P G PP G PP GG P P G
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP-FNPSGAPPSGGPPGPFNPSG 429
Score = 37.1 bits (82), Expect = 0.029
Identities = 33/128 (25%), Positives = 33/128 (25%), Gaps = 3/128 (2%)
Frame = +1
Query: 931 GXXXXPXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPX 1110
G P GG P G G P PP P G P
Sbjct: 186 GPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPP---SGGPP 242
Query: 1111 GXXXXPGXXP-XXPPG--XPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGX 1281
G G P PPG P P P G PP G PP GG
Sbjct: 243 GPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP-FDPSGAPPSGGP 301
Query: 1282 XXPXXPXG 1305
P P G
Sbjct: 302 PGPFDPSG 309
Score = 37.1 bits (82), Expect = 0.029
Identities = 28/120 (23%), Positives = 28/120 (23%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 265
Query: 1126 PGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P P P P P G PP G P GG P P G
Sbjct: 266 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP-FDPSGAQPSGGPPGPFNPSG 324
Score = 37.1 bits (82), Expect = 0.029
Identities = 32/123 (26%), Positives = 32/123 (26%), Gaps = 3/123 (2%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P G
Sbjct: 236 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP---SGGPPGPFDP 292
Query: 1126 PGXXP-XXPPG--XPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXX 1296
G P PPG P P G PP G PP GG P
Sbjct: 293 SGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGP-FDPSGAPPSGGPPGPFN 351
Query: 1297 PXG 1305
P G
Sbjct: 352 PSG 354
Score = 37.1 bits (82), Expect = 0.029
Identities = 28/120 (23%), Positives = 28/120 (23%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG G P G P PP P G P
Sbjct: 296 PPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 355
Query: 1126 PGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P P P P P G PP G PP GG P P G
Sbjct: 356 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP-FDPSGAPPSGGPPGPFNPSG 414
Score = 36.3 bits (80), Expect = 0.051
Identities = 28/120 (23%), Positives = 28/120 (23%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP G P
Sbjct: 266 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGA 325
Query: 1126 PGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P P P P P G PP G PP GG P P G
Sbjct: 326 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP-FDPSGAPPSGGPPGPFDPSG 384
Score = 29.1 bits (62), Expect = 7.7
Identities = 25/100 (25%), Positives = 25/100 (25%), Gaps = 3/100 (3%)
Frame = +1
Query: 946 PXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXX 1125
P GG P G P G P PP P G P G
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP---SGGPPGPFDP 487
Query: 1126 PGXXP-XXPPG--XPXXXPXXXXXXXXXXPXGGGXXXXPP 1236
G P PPG P P P G PP
Sbjct: 488 SGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPP 527
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 37.5 bits (83), Expect = 0.022
Identities = 25/91 (27%), Positives = 28/91 (30%)
Frame = +1
Query: 1039 PXAPPPXXXXXKXXPXXXGGGXPXGXXXXPGXXPXXPPGXPXXXPXXXXXXXXXXPXGGG 1218
P PP + P G P PG P PPG P P P GG
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG-PPGMP-GMPPPPPPSRFGPPGMGG 332
Query: 1219 XXXXPPXXVXXXGGXPPXGGXXXPXXPXGXF 1311
PP + GG PP P G +
Sbjct: 333 MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMY 363
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 37.5 bits (83), Expect = 0.022
Identities = 25/91 (27%), Positives = 28/91 (30%)
Frame = +1
Query: 1039 PXAPPPXXXXXKXXPXXXGGGXPXGXXXXPGXXPXXPPGXPXXXPXXXXXXXXXXPXGGG 1218
P PP + P G P PG P PPG P P P GG
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG-PPGMP-GMPPPPPPSRFGPPGMGG 342
Query: 1219 XXXXPPXXVXXXGGXPPXGGXXXPXXPXGXF 1311
PP + GG PP P G +
Sbjct: 343 MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMY 373
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.067
Identities = 27/94 (28%), Positives = 28/94 (29%), Gaps = 4/94 (4%)
Frame = -3
Query: 1268 GGXPPXXXTXXGGXXXXP---PPXGXXXXXXXXXXGXXXGXPGGXXGXXPGXXXXPXGXP 1098
GG PP + G P PP G PGG PG P
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYG 424
Query: 1097 PPXXXGXXFXXXXXGG-GAXGKTPPXRPFXGXGP 999
PP F GG GA G P P G P
Sbjct: 425 PPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPP 458
Score = 32.7 bits (71), Expect = 0.62
Identities = 27/100 (27%), Positives = 27/100 (27%), Gaps = 4/100 (4%)
Frame = +1
Query: 1003 PXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXXPGXXPXXP--PGXPXXX-- 1170
P P G P PP P G P G G P P PG P
Sbjct: 368 PPPVSSAPGNFAP--PPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGP 425
Query: 1171 PXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXP 1290
P P GG PP G PP G P
Sbjct: 426 PQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAP 465
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.9 bits (74), Expect = 0.27
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = -3
Query: 1277 PPXGGXPPXXXTXXGGXXXXPPPXGXXXXXXXXXXGXXXGXPGGXXGXXPGXXXXPXGXP 1098
PP GG PP G PPP G G P G P P G P
Sbjct: 1554 PPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPP---PLMGGPPPRLGMPPPGPPPPNGGP 1610
Query: 1097 PP 1092
PP
Sbjct: 1611 PP 1612
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 33.5 bits (73), Expect = 0.36
Identities = 26/105 (24%), Positives = 26/105 (24%)
Frame = -1
Query: 1303 PXGXGGXXXPPXGXXXPXXXPXXGXXXXPPXPXGXXGXXXXXXXXGXGGXXGXXXGXPXG 1124
P G G P G P PP P G G G GG P G
Sbjct: 181 PAGPAGAAGPD-GEGAGYAEPGPAGPAGPPGPDGQPGAPGPDGQPGAGGTTSTNQPGPPG 239
Query: 1123 XXXPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPGPFXGXGPXXA 989
P P G GP P G GP A
Sbjct: 240 PAGPPGPAGPAGEDAYAQPSPAGTPGPPGPPGKDGEAGPDGPAGA 284
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical protein
C34F6.3 protein.
Length = 283
Score = 32.3 bits (70), Expect = 0.82
Identities = 25/99 (25%), Positives = 25/99 (25%)
Frame = -1
Query: 1297 GXGGXXXPPXGXXXPXXXPXXGXXXXPPXPXGXXGXXXXXXXXGXGGXXGXXXGXPXGXX 1118
G G PP G P G PP P G G G G G P
Sbjct: 151 GPKGPPGPPGGPGE-LGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPG 209
Query: 1117 XPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPGPFXGXG 1001
P P G G P PG G G
Sbjct: 210 QPGQPGEPGSPGEPGPDGRAGHPGRNGPPGPPGDNGGQG 248
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical protein
C34F6.2 protein.
Length = 283
Score = 32.3 bits (70), Expect = 0.82
Identities = 25/99 (25%), Positives = 25/99 (25%)
Frame = -1
Query: 1297 GXGGXXXPPXGXXXPXXXPXXGXXXXPPXPXGXXGXXXXXXXXGXGGXXGXXXGXPXGXX 1118
G G PP G P G PP P G G G G G P
Sbjct: 151 GPKGPPGPPGGPGE-LGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPG 209
Query: 1117 XPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPGPFXGXG 1001
P P G G P PG G G
Sbjct: 210 QPGQPGEPGSPGEPGPDGRAGHPGRNGPPGPPGDNGGQG 248
>Z81034-1|CAB02726.1| 194|Caenorhabditis elegans Hypothetical
protein C15C6.1 protein.
Length = 194
Score = 32.3 bits (70), Expect = 0.82
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = -1
Query: 436 RFLGAVIVHIMLHLV*IFFYSCH*AFLFSFHVFLK---LLCVQNFLPRTNRGNVNKAYFV 266
RF+ V+ M H++ SC+ +FSF+ F+K +L + N++ T G N A+++
Sbjct: 84 RFVWPVVAISMFHVI----LSCYALVIFSFYFFIKPYYILMISNWMFDTMHGEKNAAFYL 139
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.82
Identities = 31/137 (22%), Positives = 33/137 (24%)
Frame = +1
Query: 889 GXXXGGXGXXSXXGGXXXXPXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXX 1068
G G G G G + G P P KG +PPP
Sbjct: 202 GVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAA 261
Query: 1069 XKXXPXXXGGGXPXGXXXXPGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVX 1248
P G P G P P G P P G P
Sbjct: 262 GSPPPPRTGSPPP----PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--P 315
Query: 1249 XXGGXPPXGGXXXPXXP 1299
GG PP G P P
Sbjct: 316 QAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.82
Identities = 31/137 (22%), Positives = 33/137 (24%)
Frame = +1
Query: 889 GXXXGGXGXXSXXGGXXXXPXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXX 1068
G G G G G + G P P KG +PPP
Sbjct: 223 GVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAA 282
Query: 1069 XKXXPXXXGGGXPXGXXXXPGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVX 1248
P G P G P P G P P G P
Sbjct: 283 GSPPPPRTGSPPP----PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--P 336
Query: 1249 XXGGXPPXGGXXXPXXP 1299
GG PP G P P
Sbjct: 337 QAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.82
Identities = 31/137 (22%), Positives = 33/137 (24%)
Frame = +1
Query: 889 GXXXGGXGXXSXXGGXXXXPXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXX 1068
G G G G G + G P P KG +PPP
Sbjct: 208 GVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAA 267
Query: 1069 XKXXPXXXGGGXPXGXXXXPGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXPPXXVX 1248
P G P G P P G P P G P
Sbjct: 268 GSPPPPRTGSPPP----PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--P 321
Query: 1249 XXGGXPPXGGXXXPXXP 1299
GG PP G P P
Sbjct: 322 QAGGSPPPAGTGSPPPP 338
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical protein
F17C8.2 protein.
Length = 296
Score = 31.9 bits (69), Expect = 1.1
Identities = 25/99 (25%), Positives = 25/99 (25%), Gaps = 3/99 (3%)
Frame = -1
Query: 1303 PXGXGGXXXP--PXGXXXPXXXPXXGXXXXPPXPXGXXGXXXXXXXXGXGGXXG-XXXGX 1133
P G G P P G P PP P G G G G G
Sbjct: 151 PAGPPGPEGPAGPAGSDGQPGAPGDAGKDGPPGPPGPDGDSGPNGEAGPNGEPGAPGKDG 210
Query: 1132 PXGXXXPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPGP 1016
G P PP GG G P GP
Sbjct: 211 EKGKGEPGPAGPPGPPGPGGPPGDAGGAGSDGAPGPQGP 249
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/103 (24%), Positives = 25/103 (24%), Gaps = 2/103 (1%)
Frame = -1
Query: 1303 PXGXGGXXXPPXGXXXPXXX--PXXGXXXXPPXPXGXXGXXXXXXXXGXGGXXGXXXGXP 1130
P G G PP P P PP P G G G G G
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGG 216
Query: 1129 XGXXXPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPGPFXGXG 1001
G P P GG GP PG G
Sbjct: 217 PGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/103 (24%), Positives = 25/103 (24%), Gaps = 2/103 (1%)
Frame = -1
Query: 1303 PXGXGGXXXPPXGXXXPXXX--PXXGXXXXPPXPXGXXGXXXXXXXXGXGGXXGXXXGXP 1130
P G G PP P P PP P G G G G G
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGG 216
Query: 1129 XGXXXPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPGPFXGXG 1001
G P P GG GP PG G
Sbjct: 217 PGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/103 (24%), Positives = 25/103 (24%), Gaps = 2/103 (1%)
Frame = -1
Query: 1303 PXGXGGXXXPPXGXXXPXXX--PXXGXXXXPPXPXGXXGXXXXXXXXGXGGXXGXXXGXP 1130
P G G PP P P PP P G G G G G
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGG 216
Query: 1129 XGXXXPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPGPFXGXG 1001
G P P GG GP PG G
Sbjct: 217 PGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/103 (24%), Positives = 25/103 (24%), Gaps = 2/103 (1%)
Frame = -1
Query: 1303 PXGXGGXXXPPXGXXXPXXX--PXXGXXXXPPXPXGXXGXXXXXXXXGXGGXXGXXXGXP 1130
P G G PP P P PP P G G G G G
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGG 216
Query: 1129 XGXXXPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPGPFXGXG 1001
G P P GG GP PG G
Sbjct: 217 PGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 2.5
Identities = 29/125 (23%), Positives = 32/125 (25%), Gaps = 2/125 (1%)
Frame = +1
Query: 931 GXXXXPXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPX 1110
G P G + P P + P PPP + P G P
Sbjct: 95 GAQGPPGTPGSAGRPGKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPD 154
Query: 1111 GXXXXPGXXPXXPPG--XPXXXPXXXXXXXXXXPXGGGXXXXPPXXVXXXGGXPPXGGXX 1284
G G P PPG P P P G PP G P G
Sbjct: 155 GNKGPLG--PPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGPPGE-NGNNGEPQPGAPG 211
Query: 1285 XPXXP 1299
P P
Sbjct: 212 EPGQP 216
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical protein
T21B4.2 protein.
Length = 312
Score = 30.3 bits (65), Expect = 3.3
Identities = 26/105 (24%), Positives = 26/105 (24%), Gaps = 4/105 (3%)
Frame = -1
Query: 1303 PXGXGGXXXPPXGXXXPXXXPXXG--XXXXPPXPXGXXGXXXXXXXXGXGGXXGXXXGXP 1130
P G G P G P P G PP P G G G G G P
Sbjct: 176 PAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVP 235
Query: 1129 XGXXXPXXGXP--PXXXXXXXXXXXXGGXGPXXKPXXPGPFXGXG 1001
P P P GP P GP G
Sbjct: 236 GQQGPPGPPGPAGPPGPAGNAGQAGYAQPGPAGPPGDAGPDGAPG 280
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 991 PXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXXPGXXPXXPPGXP 1161
P P P K R GG P PPP P P P P P P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 3.3
Identities = 25/90 (27%), Positives = 25/90 (27%)
Frame = +3
Query: 999 GPXPXKGPGXXGFXXGPXPPXXXXKXXXXXXXGGXPXXGXXXPXGXPXXXPXXPPXPXXX 1178
GP P PG GP PP GG P P G P PP P
Sbjct: 712 GPPPP--PGLPPITGGPPPPPPPG--GLPPITGGPPPP--PPPGGLPPISGGPPPPPPPP 765
Query: 1179 XXXXXPXXPXGXGGXXXXPXXGXXXGXXXP 1268
P P GG P G P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 30.3 bits (65), Expect = 3.3
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -3
Query: 1277 PPXGGXPPXXXTXXGGXXXXPPPXGXXXXXXXXXXGXXXGXPGGXXGXXPGXXXXPXGXP 1098
PP G PP GG PPP G G G P P G P
Sbjct: 714 PPPPGLPPIT----GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 1097 PPXXXGXXFXXXXXGGGAXGKTPPXRP 1017
PP GG G PP P
Sbjct: 770 PPP------PPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 3.3
Identities = 25/90 (27%), Positives = 25/90 (27%)
Frame = +3
Query: 999 GPXPXKGPGXXGFXXGPXPPXXXXKXXXXXXXGGXPXXGXXXPXGXPXXXPXXPPXPXXX 1178
GP P PG GP PP GG P P G P PP P
Sbjct: 712 GPPPP--PGLPPITGGPPPPPPPG--GLPPITGGPPPP--PPPGGLPPISGGPPPPPPPP 765
Query: 1179 XXXXXPXXPXGXGGXXXXPXXGXXXGXXXP 1268
P P GG P G P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 30.3 bits (65), Expect = 3.3
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -3
Query: 1277 PPXGGXPPXXXTXXGGXXXXPPPXGXXXXXXXXXXGXXXGXPGGXXGXXPGXXXXPXGXP 1098
PP G PP GG PPP G G G P P G P
Sbjct: 714 PPPPGLPPIT----GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 1097 PPXXXGXXFXXXXXGGGAXGKTPPXRP 1017
PP GG G PP P
Sbjct: 770 PPP------PPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 3.3
Identities = 25/90 (27%), Positives = 25/90 (27%)
Frame = +3
Query: 999 GPXPXKGPGXXGFXXGPXPPXXXXKXXXXXXXGGXPXXGXXXPXGXPXXXPXXPPXPXXX 1178
GP P PG GP PP GG P P G P PP P
Sbjct: 295 GPPPP--PGLPPITGGPPPPPPPG--GLPPITGGPPPP--PPPGGLPPISGGPPPPPPPP 348
Query: 1179 XXXXXPXXPXGXGGXXXXPXXGXXXGXXXP 1268
P P GG P G P
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 30.3 bits (65), Expect = 3.3
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -3
Query: 1277 PPXGGXPPXXXTXXGGXXXXPPPXGXXXXXXXXXXGXXXGXPGGXXGXXPGXXXXPXGXP 1098
PP G PP GG PPP G G G P P G P
Sbjct: 297 PPPPGLPPIT----GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Query: 1097 PPXXXGXXFXXXXXGGGAXGKTPPXRP 1017
PP GG G PP P
Sbjct: 353 PPP------PPPPPGGFKGGPPPPPPP 373
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical protein
C53B4.5 protein.
Length = 289
Score = 29.9 bits (64), Expect = 4.4
Identities = 29/125 (23%), Positives = 32/125 (25%), Gaps = 2/125 (1%)
Frame = +1
Query: 931 GXXXXPXXGGXXXKXXXXXGPXKGPXPXKGRXGGVXPXAPPPXXXXXKXXPXXXGGGXPX 1110
G P G + P P + P PPP + P G P
Sbjct: 93 GAQGPPGTPGRAGRPGKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQ 152
Query: 1111 GXXXXPGXXPXXPPGXPXXXPXXXXXXXXXXPXGGGXXXXP--PXXVXXXGGXPPXGGXX 1284
G G P PPG P P G G P P G P G
Sbjct: 153 GNKGPLG--PPGPPG-PEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGEPQPGSPG 209
Query: 1285 XPXXP 1299
P P
Sbjct: 210 EPGRP 214
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein 20
protein.
Length = 288
Score = 29.9 bits (64), Expect = 4.4
Identities = 23/93 (24%), Positives = 23/93 (24%)
Frame = -1
Query: 1297 GXGGXXXPPXGXXXPXXXPXXGXXXXPPXPXGXXGXXXXXXXXGXGGXXGXXXGXPXGXX 1118
G G PP G P G PP P G G G G G P
Sbjct: 156 GPKGPPGPPGGHGEPGPA-GRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSPPG 214
Query: 1117 XPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPG 1019
P P G G P PG
Sbjct: 215 EPGQPGEPGGPGEPGADGRPGHPGRAGPPGPPG 247
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 4.4
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 2/98 (2%)
Frame = +1
Query: 1018 GRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXXPGXX--PXXPPGXPXXXPXXXXXX 1191
G GG P PPP + P P G G P PPG P
Sbjct: 125 GGPGG--PGGPPPFGQPFQQAPQGMFN-VPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMG 181
Query: 1192 XXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P G G PP G P GG P P G
Sbjct: 182 G---PPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGG 216
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 4.4
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 2/98 (2%)
Frame = +1
Query: 1018 GRXGGVXPXAPPPXXXXXKXXPXXXGGGXPXGXXXXPGXX--PXXPPGXPXXXPXXXXXX 1191
G GG P PPP + P P G G P PPG P
Sbjct: 405 GGPGG--PGGPPPFGQPFQQAPQGMFN-VPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMG 461
Query: 1192 XXXXPXGGGXXXXPPXXVXXXGGXPPXGGXXXPXXPXG 1305
P G G PP G P GG P P G
Sbjct: 462 G---PPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGG 496
>AL023834-2|CAA19479.2| 217|Caenorhabditis elegans Hypothetical
protein Y32B12A.3 protein.
Length = 217
Score = 29.9 bits (64), Expect = 4.4
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 149 CYYDGTVCQXATYSEEKNV**NKLNQNIY 235
C +DG+VCQ T ++E +V ++ N+ I+
Sbjct: 167 CLWDGSVCQETTRTDESSVAIHEANEKIF 195
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 5.8
Identities = 25/95 (26%), Positives = 25/95 (26%)
Frame = -1
Query: 1303 PXGXGGXXXPPXGXXXPXXXPXXGXXXXPPXPXGXXGXXXXXXXXGXGGXXGXXXGXPXG 1124
P G G P G P P PP P G G G G G P
Sbjct: 196 PSGPQGAPGVP-GEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGPPGKDGQ----PGK 250
Query: 1123 XXXPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPG 1019
P P GG GP P PG
Sbjct: 251 AGPPGLPGDPGEKGSDGLPGPHGGTGPRGPPGQPG 285
>L14429-2|AAP68927.1| 229|Caenorhabditis elegans Hypothetical
protein ZK652.6b protein.
Length = 229
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 391 KQDVTLYERLQHLRIGEK 444
K D+ L E LQHLR+GEK
Sbjct: 113 KPDIALKEALQHLRLGEK 130
>L14429-1|AAA28219.2| 575|Caenorhabditis elegans Hypothetical
protein ZK652.6a protein.
Length = 575
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 391 KQDVTLYERLQHLRIGEK 444
K D+ L E LQHLR+GEK
Sbjct: 459 KPDIALKEALQHLRLGEK 476
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein 34
protein.
Length = 299
Score = 29.1 bits (62), Expect = 7.7
Identities = 26/104 (25%), Positives = 26/104 (25%), Gaps = 2/104 (1%)
Frame = -1
Query: 1303 PXGXGGXXXPPXGXXXPXXXPXXGXXXXP--PXPXGXXGXXXXXXXXGXGGXXGXXXGXP 1130
P G G PP P G P P P G G G G G
Sbjct: 152 PPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSE 211
Query: 1129 XGXXXPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPGPFXGXGP 998
P PP G G P PGP GP
Sbjct: 212 P--LIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGP 253
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein 36
protein.
Length = 307
Score = 29.1 bits (62), Expect = 7.7
Identities = 21/76 (27%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = -1
Query: 1219 PPXPXGXXGXXXXXXXXGXGGXXGXXXGX--PXGXXXPXXGXPPXXXXXXXXXXXXGGXG 1046
PP P G G G G G P G P GG G
Sbjct: 204 PPGPPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGGQG 263
Query: 1045 PXXKPXXPGPFXGXGP 998
P PGP G GP
Sbjct: 264 PPGDAGGPGPVGGQGP 279
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 29.1 bits (62), Expect = 7.7
Identities = 21/76 (27%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = -1
Query: 1219 PPXPXGXXGXXXXXXXXGXGGXXGXXXGX--PXGXXXPXXGXPPXXXXXXXXXXXXGGXG 1046
PP P G G G G G P G P GG G
Sbjct: 204 PPGPPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGGQG 263
Query: 1045 PXXKPXXPGPFXGXGP 998
P PGP G GP
Sbjct: 264 PPGDAGGPGPVGGQGP 279
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular collagen
RAM-4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 7.7
Identities = 26/104 (25%), Positives = 26/104 (25%), Gaps = 2/104 (1%)
Frame = -1
Query: 1303 PXGXGGXXXPPXGXXXPXXXPXXGXXXXP--PXPXGXXGXXXXXXXXGXGGXXGXXXGXP 1130
P G G PP P G P P P G G G G G
Sbjct: 152 PPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSE 211
Query: 1129 XGXXXPXXGXPPXXXXXXXXXXXXGGXGPXXKPXXPGPFXGXGP 998
P PP G G P PGP GP
Sbjct: 212 P--LIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGP 253
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 343 HEMRKEMLNDKNRRIFKQDVTLYERLQHL 429
H+ RKE L+ + RIF+ +V +RL+HL
Sbjct: 598 HQQRKEKLSAEVGRIFRGNVKSVKRLRHL 626
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,195,167
Number of Sequences: 27780
Number of extensions: 397161
Number of successful extensions: 1198
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3881690894
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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