Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F16
         (1352 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   0.031
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.31 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.94 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.2  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   5.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   5.0  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect(2) = 0.031
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 568 GGXXPPPPPPP 536
           G   PPPPPPP
Sbjct: 781 GSPPPPPPPPP 791



 Score = 25.4 bits (53), Expect(2) = 0.031
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 556 PPPPPPPXGXXFFXGG 509
           PPPPPPP       GG
Sbjct: 783 PPPPPPPPPSSLSPGG 798


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 0.31
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +3

Query: 879 PXXGGXXXGGGGXPPXGGGXXNXPPXXGGG 968
           P  GG   G GG  P GGG  +  P  GGG
Sbjct: 200 PGAGGG--GSGGGAPGGGGGSSGGPGPGGG 227



 Score = 27.9 bits (59), Expect = 0.71
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +1

Query: 451 KKXPPPXGGXGXFXGXPPPPPXKKX-PXPGXGGGGG 555
           K+  P  GG G   G P         P PG GGGGG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 26.2 bits (55), Expect = 2.2
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +1

Query: 901 GGGGXXPPXGGGXKTPPXXXGGG 969
           G GG  P  GGG    P   GGG
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 25.8 bits (54), Expect = 2.9
 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
 Frame = +1

Query: 520 KXPXPGXGGG--GGXXPPPXGGXXXPPXRGG 606
           K   PG GGG  GG  P   GG    P  GG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGG 226



 Score = 24.6 bits (51), Expect = 6.6
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 532 PGXGGGGGXXPPPXGG 579
           PG GGG    P P GG
Sbjct: 212 PGGGGGSSGGPGPGGG 227



 Score = 24.2 bits (50), Expect = 8.8
 Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
 Frame = +2

Query: 536 GXGGGGGXXPPPXGGXXX-PXKGGG 607
           G GG GG  P   GG    P  GGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 24.2 bits (50), Expect = 8.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 901 GGGGXXPPXGGGXKTPPXXXGGG 969
           GG G   P GGG  +     GGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGG 227


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 27.5 bits (58), Expect = 0.94
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = +3

Query: 873 SPPXXGGXXXGGGGXPPXGGGXXNXPPXXGGG 968
           SP   GG   GGGG    G G        GGG
Sbjct: 649 SPGSGGGGGGGGGGGGSVGSGGIGSSSLGGGG 680



 Score = 24.2 bits (50), Expect = 8.8
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +3

Query: 888 GGXXXGGGGXPPXGGGXXNXPPXXGGG 968
           GG   GGGG     GG  +     GGG
Sbjct: 655 GGGGGGGGGGSVGSGGIGSSSLGGGGG 681



 Score = 24.2 bits (50), Expect = 8.8
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 536 GXGGGGGXXPPPXGGXXXPXKGGG 607
           G GGGGG      GG      GGG
Sbjct: 656 GGGGGGGGGSVGSGGIGSSSLGGG 679


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 568 GGXXPPPPPPPXG 530
           G   PPPPPPP G
Sbjct: 526 GPLGPPPPPPPGG 538



 Score = 26.2 bits (55), Expect = 2.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 568 GGXXPPPPPPPXG 530
           GG   PPPPPP G
Sbjct: 525 GGPLGPPPPPPPG 537



 Score = 25.8 bits (54), Expect = 2.9
 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 4/27 (14%)
 Frame = +1

Query: 499 PPPPPXKKXPXPGXGG--GG--GXXPP 567
           PPPPP    P P  GG  GG  G  PP
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 23.8 bits (49), Expect(2) = 1.2
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -2

Query: 931 PPXGGXPPPPXXXPP 887
           PP    PPPP   PP
Sbjct: 581 PPPAPPPPPPMGPPP 595



 Score = 21.4 bits (43), Expect(2) = 1.2
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -2

Query: 967 PPPXXGGXFXXPPPXGGXPP 908
           PPP  GG     PP    PP
Sbjct: 532 PPPPPGGAVLNIPPQFLPPP 551


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 5.0
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -2

Query: 967 PPPXXGGXFXXPPPXGGXPPPPXXXP 890
           PP   G     PPP  G  PPP   P
Sbjct: 99  PPLLMGPNGPLPPPMMGMRPPPMMVP 124



 Score = 24.2 bits (50), Expect = 8.8
 Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
 Frame = -2

Query: 610 GXPPFX---GGXXPPPXGGXXPPPPPPP 536
           G PP      G  PPP  G  PPP   P
Sbjct: 97  GAPPLLMGPNGPLPPPMMGMRPPPMMVP 124


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 5.0
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 604 PPFXGGXXPPPXGGXXPPPPPPPXG 530
           PP  GG  P P G   P  P  P G
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPG 235



 Score = 25.0 bits (52), Expect = 5.0
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = +1

Query: 463 PPXGGXGXFXGXPPPPPXKKXPXPGXGGGGGXXPP 567
           PP G    F   P   P    P  G    GG  PP
Sbjct: 312 PPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPP 346



 Score = 24.6 bits (51), Expect = 6.6
 Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
 Frame = +1

Query: 460 PPPXGGXGXFXGXPPPPPXKKXPX--PGXGGGGGXXPPPXGGXXXPPXRGGXP 612
           P P G      G P P   +  P   PG   G    PP   G   PP  G  P
Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPP 264



 Score = 24.2 bits (50), Expect = 8.8
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
 Frame = -2

Query: 604 PPFXGGXXPPPXGGXXPP-PPPPPXG 530
           PP   G   PP  G  PP  PP P G
Sbjct: 248 PPSAQGMQRPPMMGQPPPIRPPNPMG 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.152    0.524 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,373
Number of Sequences: 2352
Number of extensions: 13895
Number of successful extensions: 100
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 155649285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)