Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_F14
(1394 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.013
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.071
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.12
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.12
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.16
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.16
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.88
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 3.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.7
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.7
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 8.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 8.2
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 27 8.2
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 8.2
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +1
Query: 1285 PPPPXXXXXPPPPPP---XXXGXPPPPP 1359
PP P PPPPPP G PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 32.7 bits (71), Expect = 0.12
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = +3
Query: 1284 PPPXXKXXXXPPPPPP---XXGXPPPPP 1358
PP PPPPPP G PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 32.3 bits (70), Expect = 0.16
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 1285 PPPPXXXXXPPPPPPXXXGXPPPPP--GGXXXXPP 1383
PPPP P P P PPP P GG PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 32.3 bits (70), Expect = 0.16
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = +2
Query: 1283 PPPXXKXXXXPPPPPP---XXXXPPPPP 1357
PPP PPPPPP PPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 1285 PPPPXXXXXPPPPPPXXXGXP--PPPPGGXXXXPP 1383
P P PPP P G P PPPPG PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 31.9 bits (69), Expect = 0.22
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Frame = +1
Query: 1288 PPPXXXXXPPPPPPXXXG----XPPPPP 1359
PPP PPPPP G PPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 31.5 bits (68), Expect = 0.29
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 1284 PPPXXKXXXXPPPPPPXXGXPPPPP 1358
P P PPP P G PPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 31.1 bits (67), Expect = 0.38
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 625 PPPRXXXXXXXXPPPPPPPP 684
PPP PPPPPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPP 782
Score = 31.1 bits (67), Expect = 0.38
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 625 PPPRXXXXXXXXPPPPPPPP 684
PPP PPPPPPPP
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.66
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 979 PPXXPPXXXXXXXXXXXXXPPPXXGGGGXXPXPPPXXXXXXXGXPPP 1119
PP P PPP GG P PPP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.9 bits (64), Expect = 0.88
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 979 PPXXPPXXXXXXXXXXXXXPPPXXGGGGXXPXPPPXXXXXXXGXPPP 1119
PP PP PP G P PPP G PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = -2
Query: 778 PPRXXGGXXXPPP---XGGXXPPPPPP 707
P GG PPP G PPPPPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = -1
Query: 773 PXXGGXXXPPPXGG--XXXPPPPPXXXXXXXXGG 678
P GG PPP G PPPPP GG
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = -3
Query: 777 PPXGGGXXXPPPXG--GXXXPPPPP 709
P GG PPP G G PPPPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 1283 PPPXXKXXXXPPPPPPXXXXPPPPPXGXXXXXPP 1384
PPP P P P PPP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -3
Query: 750 PPPXGGXXXPPPPPXXXXXXXXGGGGGGGGXXXXPPPPXGGGGFXXXXKXXPPP 589
PPP P P P GG PPPP G G PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGG---PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = -3
Query: 774 PXGGGXXXPPPXGG--XXXPPPPPXXXXXXXXGG 679
P GG PPP G PPPPP GG
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 625 PPPRXXXXXXXXPPPPPPPP 684
PPP PPPPPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 1283 PPPXXKXXXXPPPPPPXXXXPPPPP 1357
PPP PPPP PPPPP
Sbjct: 763 PPPPPPGVAGAGPPPP----PPPPP 783
Score = 26.6 bits (56), Expect = 8.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 661 PPPPPPPP 684
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 1285 PPPPXXXXXPPPPPPXXXGXPPPPP 1359
PPPP PPP PPPPP
Sbjct: 763 PPPPPPGVAGAGPPP----PPPPPP 783
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 1036 PPPXXGGGGXXPXPPP 1083
PPP G G P PPP
Sbjct: 766 PPPGVAGAGPPPPPPP 781
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.071
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +1
Query: 1285 PPPPXXXXXPPPPPPXXXGXP--PPPP 1359
PPPP PP PP G P PPPP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.9 bits (64), Expect = 0.88
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Frame = +1
Query: 1291 PPXXXXXPPPPPPXXXGXP---PPPPGGXXXXPP 1383
PP PPPPP P PP P G PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 1313 PPPPPPXXXXPPPPPXGXXXXXPP 1384
P PPPP PPPP PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +3
Query: 1284 PPPXXKXXXXPPPPPPXXGXPP--PPP 1358
PPP PP PP PP PPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +2
Query: 1286 PPXXKXXXXPPPPPPXXXXP--PPPPXGXXXXXPP 1384
PP PPPP P PP P G PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.7 bits (61), Expect(2) = 0.12
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 656 FXPPPPPPPP 685
F PPPPPPPP
Sbjct: 944 FPPPPPPPPP 953
Score = 22.6 bits (46), Expect(2) = 0.12
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 668 PPPPPPXXXXXXXXGG 715
PPPPPP GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.12
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +1
Query: 1291 PPXXXXXPPPPP---PXXXGXPPPPPG 1362
PP PPPPP P PPPPPG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 29.9 bits (64), Expect = 0.88
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 1279 GXPPPPXXXXXPPPP---PPXXXGXPPPPPGG 1365
G PPPP PPPP PP PPPPP G
Sbjct: 7 GNPPPP-----PPPPGFEPPSQP--PPPPPPG 31
Score = 29.9 bits (64), Expect = 0.88
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 648 PPPPXGGGGFXXXXKXXPPPPXXXXKKK 565
PPPP GF + PPPP KK+
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKR 36
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
Frame = +3
Query: 1314 PPPPPPXXGX-----PPPPP 1358
PPPPPP G PPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 625 PPPRXXXXXXXXPPPPPPP 681
PPP PPPPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 625 PPPRXXXXXXXXPPPPPPPP 684
PPP PPPPPPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 4.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 1283 PPPXXKXXXXPPPPPP 1330
PPP + PPPPPP
Sbjct: 14 PPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 8.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 662 PPPPPPPP 685
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.16
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 1361 PGGGGGXPXXXGGGGGGXXXFXGG-GGXPXXXXPP 1260
PGG GG P GGG GG GG GG P P
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 30.3 bits (65), Expect = 0.66
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 684 GGGGGGGGXXXXPPPPXGGGGF 619
G GG GGG PP P G GGF
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGF 210
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 1361 PGGGGGXPXXXGGGGGGXXXFXGG-GGXP 1278
PGG G P GGG GG GG GG P
Sbjct: 230 PGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 1380 GXXXXXPXGGGGGXXXXGGGGGGXXXXXXXGGGP 1279
G P G GGG GGG GG GGP
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 27.5 bits (58), Expect = 4.7
Identities = 28/98 (28%), Positives = 28/98 (28%)
Frame = -1
Query: 1328 GGGGGGXXXFXGGGGXPXXXXPPPPPXXXXXXXXXXXGXXXXXGGGXXXXXXXXXXXXXX 1149
G GGG F GG G P PP P G GG
Sbjct: 184 GHNGGGFGGFGGGSGGP----PPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Query: 1148 XGGXXXPPPXGGGXPXXXXXXXGGGXGXXPPPPXXGGG 1035
GG P GGG GGG G P GG
Sbjct: 240 FGG--GPGGFGGG-----LGGFGGGPGGFGGGPGGHGG 270
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 1358 GGGGGXPXXXGGGGGGXXXFXGGG 1287
GGG G P GG GG F G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEG 217
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -3
Query: 768 GGGXXXPPPXGGXXXPPPPPXXXXXXXXGGGGGGGGXXXXPPPPXGGGG 622
GGG PPP G G GG GGG P G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.16
Identities = 28/112 (25%), Positives = 28/112 (25%), Gaps = 4/112 (3%)
Frame = +1
Query: 1036 PPPXXGGGGXXPXPPPXXXXXXXGXPPPXGGGXXX--PPXXXXXXXXXXXXXXXPPPXXX 1209
PPP G P PP P PP PPP
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPP- 315
Query: 1210 XXPXXXXXXXXXXXGGGGGXXXXGXPPPPXXXXXPP--PPPPXXXGXPPPPP 1359
P G G PPPP P PP PPPPP
Sbjct: 316 --PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 31.1 bits (67), Expect = 0.38
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -2
Query: 778 PPRXXGGXXXP-PPXGGXXPPPPPP 707
PPR P PP G PPPPPP
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = +1
Query: 1285 PPPPXXXXXPPPPPP---XXXGXPPPP 1356
P PP PPPPPP G PPP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 1284 PPPXXKXXXXPPPPPPXXGXPPPPP 1358
PPP P PP PPPPP
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 28.3 bits (60), Expect = 2.7
Identities = 27/117 (23%), Positives = 27/117 (23%), Gaps = 1/117 (0%)
Frame = +1
Query: 1036 PPPXXGGGGXXPXPPPXXXXXXXGXPPPXGGGXXXPPXXXXXXXXXXXXXXXPPPXXXXX 1215
PPP G P PP PPP PPP
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPP--PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 1216 PXXXXXXXXXXXGGGGGXXXXGXPPPPXXXXXPPPPPPXX-XGXPPPPPGGXXXXPP 1383
G PP P PP PP PP P G PP
Sbjct: 399 SAPALPPL-------GNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 6/52 (11%)
Frame = -3
Query: 723 PPPPPXXXXXXXXGGGGGGGGXXXXPPPP------XGGGGFXXXXKXXPPPP 586
PPPPP G G PPPP G + PPPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 625 PPPRXXXXXXXXPPPPPPPPXXXXXXXXGGGGGXXXPPXGGGXXXPP 765
PP PPPPPPP G PP G PP
Sbjct: 325 PPIGNGSSNSSLPPPPPPP-------RSNAAGSIPLPPQGRSAPPPP 364
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.88
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 1279 GXPPPPXXXXXPPPPPPXXXGXPPPPPGGXXXXP 1380
G PP P PP P P P PPP P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 1285 PPPPXXXXXPPPPPPXXXGXPPPPPGGXXXXP 1380
PP P PP P P P P P G P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 1285 PPPPXXXXXPPPPPPXXXGXPPPPPGGXXXXP 1380
PP P PP P P P P P G P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +1
Query: 1279 GXPPPPXXXXXPPPPPPXXXGXP--PPPPGGXXXXPP 1383
G PP P PP P G P P P G PP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 1284 PPPXXKXXXXPPPPPPXXGXPPPPPXGXXXXXP 1382
PP PP P P G PP PP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 1277 GGPPPXXKXXXXPPPPPPXXXXPPPPPXGXXXXXPP 1384
G PP PP PPP P P P PP
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 1279 GXPPPPXXXXXPPPPPPXXXGXPPPPP 1359
G PP P PP P P P P P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 27.1 bits (57), Expect = 6.2
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 1278 GXPPPXXKXXXXPPPPPPXXGXPPPP 1355
G PP PP P P G PP P
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVP 1182
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +1
Query: 1285 PPPPXXXXXPPPPPPXXXGXPPPPPGGXXXXP 1380
PP P PP P PPP P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 4.7
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 656 FXPPPPPPPP 685
+ PPPPPPPP
Sbjct: 187 YNPPPPPPPP 196
Score = 26.6 bits (56), Expect = 8.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 662 PPPPPPPP 685
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 4.7
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 656 FXPPPPPPPP 685
+ PPPPPPPP
Sbjct: 368 YSPPPPPPPP 377
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 8.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 662 PPPPPPPP 685
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 8.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 661 PPPPPPPP 684
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 1382 GGXXXXPPGGGGGXPXXXGGGGGGXXXFXGGGG 1284
GG G GGG GGG GG GG G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 147
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 1264 GXXXXGXPPPPXXXXXPPPPPPXXXGXPPPPPG 1362
G G P PPPP G PPPG
Sbjct: 111 GQAPVGLAGPVRGVGYTAPPPPAGFGRGAPPPG 143
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 8.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 661 PPPPPPPP 684
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,180,805
Number of Sequences: 5004
Number of extensions: 88777
Number of successful extensions: 1201
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 773012242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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