Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F12
         (1353 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       38   0.024
08_02_1049 + 23944526-23945473                                         31   2.8  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 37.5 bits (83), Expect = 0.024
 Identities = 21/56 (37%), Positives = 21/56 (37%)
 Frame = +3

Query: 1092 GGGXGGFSGXXXXPPPGXRGXXFGXPPXXXXXXXXPGXXXGXGXXXXGGXXFPXXG 1259
            GGG GG  G    PP G RG   G PP        PG   G G    G    P  G
Sbjct: 149  GGGGGG--GALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGG 202


>08_02_1049 + 23944526-23945473
          Length = 315

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +3

Query: 1089 SGGGXGGFSGXXXXPPP 1139
            SGGG GGFSG    PPP
Sbjct: 175  SGGGGGGFSGFAPRPPP 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,041,552
Number of Sequences: 37544
Number of extensions: 393062
Number of successful extensions: 1233
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4260112632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)