Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_F11
(1358 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 199 4e-51
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 57 3e-08
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 57 3e-08
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 54 2e-07
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 54 2e-07
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 35 0.12
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 35 0.12
AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical ... 33 0.47
Z49909-12|CAA90114.2| 121|Caenorhabditis elegans Hypothetical p... 32 0.81
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 31 1.4
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 31 1.4
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 31 1.4
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 30 4.3
AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical ... 30 4.3
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 29 5.7
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 29 5.7
AF067947-3|AAC19231.1| 451|Caenorhabditis elegans Hypothetical ... 29 5.7
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 29 5.7
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 29 7.6
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 29 7.6
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 199 bits (485), Expect = 4e-51
Identities = 95/189 (50%), Positives = 134/189 (70%)
Frame = +1
Query: 286 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 465
+ D II+Q+EYYFG++NL RDKFLQE++K DDGWVP+ + FNRLA +++DT+ IANA
Sbjct: 11 DADQKIIKQLEYYFGNINLPRDKFLQEKLKEDDGWVPITTMLNFNRLASISKDTEKIANA 70
Query: 466 LNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYF 645
+ S SG++ VSEDN+K+RRN E P+PE + E ++I +R++Y KGF+ D LDD++ +
Sbjct: 71 VKNSGSGIISVSEDNQKIRRNEENPVPENSLEYWQKIKHRTVYMKGFSTDTQLDDIIQWA 130
Query: 646 KQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHKYGDNELLTLWQE 825
QF E ENV+MRR R FKGSVF T+KTRE+AE A+ K+G+ EL + Q+
Sbjct: 131 NQFGETENVLMRRL---KPGDRTFKGSVFITYKTREEAEAAQKAE-VKFGETELTKMMQD 186
Query: 826 DYLQQKQEE 852
+Y K +E
Sbjct: 187 EYWTLKNKE 195
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1
Query: 286 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 465
E+ + Q+EYYF NL D++L+ Q+ D +VP+ +L F ++ +LT D D+I A
Sbjct: 137 EIKQLLKNQLEYYFSRENLSSDRYLKCQMD-SDNYVPINVLAGFPKIMRLTTDVDLIVEA 195
Query: 466 LNKSTSGLLEVSEDNKKVR 522
L +ST+ +E+ E +KVR
Sbjct: 196 LKESTN--VELDEKFEKVR 212
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1
Query: 286 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 465
E+ + Q+EYYF NL D++L+ Q+ D +VP+ +L F ++ +LT D D+I A
Sbjct: 39 EIKQLLKNQLEYYFSRENLSSDRYLKCQMD-SDNYVPINVLAGFPKIMRLTTDVDLIVEA 97
Query: 466 LNKSTSGLLEVSEDNKKVR 522
L +ST+ +E+ E +KVR
Sbjct: 98 LKESTN--VELDEKFEKVR 114
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 54.4 bits (125), Expect = 2e-07
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +1
Query: 307 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 486
+Q+EYYF + NL +D FL+ ++ +G++P+ ++ F R+ LTED +I AL ST
Sbjct: 329 KQIEYYFSEENLQKDFFLRRKMG-PEGYLPVALIASFPRVRSLTEDYSLILEALKDSTK- 386
Query: 487 LLEVSEDNKKVR 522
+++S D ++R
Sbjct: 387 -VDMSPDGLQIR 397
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 54.4 bits (125), Expect = 2e-07
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +1
Query: 307 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 486
+Q+EYYF + NL +D FL+ ++ +G++P+ ++ F R+ LTED +I AL ST
Sbjct: 526 KQIEYYFSEENLQKDFFLRRKMG-PEGYLPVALIASFPRVRSLTEDYSLILEALKDSTK- 583
Query: 487 LLEVSEDNKKVR 522
+++S D ++R
Sbjct: 584 -VDMSPDGLQIR 594
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 35.1 bits (77), Expect = 0.12
Identities = 22/95 (23%), Positives = 50/95 (52%)
Frame = +1
Query: 505 DNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 684
D KK+ +P+ P+ + + + ++ G + ++L+D+ YF+ + +VE+ ++
Sbjct: 111 DGKKI--DPKVAFPKRTQA-KLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML-- 165
Query: 685 YVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHK 789
+K+T++ +G F TF + E A+K H+
Sbjct: 166 MFDKATQRH--RGFGFVTFDSDEVADKVCEIHFHE 198
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 35.1 bits (77), Expect = 0.12
Identities = 22/95 (23%), Positives = 50/95 (52%)
Frame = +1
Query: 505 DNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 684
D KK+ +P+ P+ + + + ++ G + ++L+D+ YF+ + +VE+ ++
Sbjct: 111 DGKKI--DPKVAFPKRTQA-KLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML-- 165
Query: 685 YVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHK 789
+K+T++ +G F TF + E A+K H+
Sbjct: 166 MFDKATQRH--RGFGFVTFDSDEVADKVCEIHFHE 198
>AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical
protein F55A12.5 protein.
Length = 849
Score = 33.1 bits (72), Expect = 0.47
Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 5/152 (3%)
Frame = +1
Query: 211 EDKEVTVETNGQEENAKTENSEDETELDIA-----IIRQVEYYFGDVNLHRDKFLQEQIK 375
ED E E +EE + E+ + TE + II Q F D + + +E IK
Sbjct: 688 EDDEDEDEYYEEEEENEVEDDDFLTETQLEELMEQIILQTSVMFRDQRMKKFGLEKEMIK 747
Query: 376 LDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMN 555
D +L +LAK+TE +N L S + K + P Q +P
Sbjct: 748 FDGATDEEILLQAEQKLAKITETLKTTSNKL----QNFCTPSSSSVKTHQ-PLQAMPSAV 802
Query: 556 EELRKEICNRSIYAKGFAKDASLDDLLNYFKQ 651
+L K + + S G D + L +Q
Sbjct: 803 SKLEKSVDHDSKKCLGCQSDEVQEAALRRLEQ 834
>Z49909-12|CAA90114.2| 121|Caenorhabditis elegans Hypothetical
protein C14A4.10 protein.
Length = 121
Score = 32.3 bits (70), Expect = 0.81
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Frame = +1
Query: 211 EDKEVTVETNGQEENAKTENSEDETELDIAIIRQVEYYFGDVNLHRDKFLQ--EQIKLDD 384
+D+E ++ +++ K N ED+ + +R + Y FGD DK L E I L+
Sbjct: 2 DDEEDLFGSDAEDDKEKVVNPEDKKHVLRRDLRSMVYGFGDDKEPYDKTLDTLEAIVLNY 61
Query: 385 GWVPLEILTKFNRLAKLT-EDTDVIANALNKSTS---GLLEVSEDNKKVRRNPEQPLPEM 552
++ K + K+ ED + K S LL +SE+ KK R+ E P++
Sbjct: 62 IKELCQLAMKVGKPDKMALEDIHYLIRRDPKKFSRVKDLLSMSEELKKARKQFEDMKPQL 121
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +1
Query: 571 EICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTR 750
E+ I+ GF + +L +F++F V++V M + ++ +K G F TF+T
Sbjct: 62 ELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSK-----GYGFITFETE 116
Query: 751 EQAEK 765
+QAE+
Sbjct: 117 DQAEE 121
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 31.5 bits (68), Expect = 1.4
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = +1
Query: 385 GWVPL-EILTKFNRLAKLTEDTDVIA---NALNKSTSGLLEVSEDNKKVRRNPEQPLPEM 552
G+V + E L K + ++TE+ + +A N+LN E E + ++ R E ++
Sbjct: 67 GYVQVPEELEKDDEWREMTEEEESLALEENSLNLEIKQA-EAMEIDAELERQVEMEADKL 125
Query: 553 NEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKST 702
E RK N+ K K ++ N+FK F+E+ ++ +E+ +
Sbjct: 126 EREHRK---NQKNLKKEEKKQEKQQEMENFFKVFEEIRSLAWSELMEQES 172
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +1
Query: 571 EICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTR 750
E+ I+ GF + +L +F++F V++V M + ++ +K G F TF+T
Sbjct: 63 ELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSK-----GYGFITFETE 117
Query: 751 EQAEK 765
+QAE+
Sbjct: 118 DQAEE 122
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 29.9 bits (64), Expect = 4.3
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 589 IYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEK 765
I+ G S L YF+QF ++E ++ +++T+K +G F T K R AE+
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVV--ITDRNTQKS--RGYGFVTMKDRASAER 91
>AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical
protein F17A9.4 protein.
Length = 457
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 535 QPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKR 711
QP+P E+++ +I +R +YA FA + D + + ++ ++ +T KR
Sbjct: 160 QPVPLSTEQIKTQIIDRFVYAAKFAYETGFDGV-----ELHGAHGYLLAQFTSPTTNKR 213
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 29.5 bits (63), Expect = 5.7
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 2/123 (1%)
Frame = +1
Query: 412 KFNRLAKLTEDTDVIANALNKSTSGLLE-VSEDNKKVR-RNPEQPLPEMNEELRKEICNR 585
KF+ L +++D A + + L E V E KV + E P +E R + +
Sbjct: 555 KFHNLELQMQESDAREKAKADAKNSLEEYVYEMRDKVSDQYAEFITPAAADEFRSVLTST 614
Query: 586 SIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEK 765
+ +DA D + + V ++ RY E T+K F + + R+ E
Sbjct: 615 EDWLYDEGEDAERDVYEKRLSELKAVGTPVVERYRESETRKPAFDSFDQSIMRVRKAYED 674
Query: 766 FMN 774
+ N
Sbjct: 675 YAN 677
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 520 RRNPEQPLPEMNEELRKEICNRS--IYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 684
R + QP EL K I R + GF KD +L+D++ +F ++ N I R
Sbjct: 849 RGDDSQPSQSELMELIKSIGPRGTVLSCNGFPKDVTLEDVVEFFNDYEPDRNSIRIR 905
>AF067947-3|AAC19231.1| 451|Caenorhabditis elegans Hypothetical
protein T10B5.8 protein.
Length = 451
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +1
Query: 535 QPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRL 714
+P P E++ E+ +R +YA FA + D + Q ++ ++ +T KR+
Sbjct: 160 KPKPLSTEQVETEVVDRFVYAAKFAYECGFDGI-----QLHGAHGYLLSQFTSPTTNKRV 214
Query: 715 FK 720
K
Sbjct: 215 DK 216
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 29.5 bits (63), Expect = 5.7
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 397 LEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEI 576
LE+ + + +L K ED + L K LEVS K + PE E+LRKE+
Sbjct: 351 LEVKSLYEKLQKSAEDRQKVETTL-KLDRDRLEVSLVTMKKKLESTPEAPENVEKLRKEL 409
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 361 QEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQP 540
++++K D G+ F+R+ L ED DV A A N S G L + K+ + P
Sbjct: 78 EQELKTDHGYSK----KSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKEAVQGRSIP 133
Query: 541 LPE 549
+ +
Sbjct: 134 IQQ 136
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 361 QEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQP 540
++++K D G+ F+R+ L ED DV A A N S G L + K+ + P
Sbjct: 78 EQELKTDHGYSK----KSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKEAVQGRSIP 133
Query: 541 LPE 549
+ +
Sbjct: 134 IQQ 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,041,956
Number of Sequences: 27780
Number of extensions: 377076
Number of successful extensions: 1353
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3829657504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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