Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F10
         (1317 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   4.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   6.5  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 11/49 (22%), Positives = 26/49 (53%)
 Frame = +3

Query: 345 IHIDQVPSEYLSHKEKYELAIKKASLMFKLLRKWQEEENTGMENYRAVL 491
           IH+D V  E  S +++ +  I K + + +  +K + E+N  ++    ++
Sbjct: 401 IHLDSVNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLI 449


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 494  WCSWISNPRRWLSSHPALCDVYTNIDGARNSRTTS 598
            W + +    RWL+  P  C V    +G + +  TS
Sbjct: 1371 WLATVVPCDRWLTGSPFFCSVRLIAEGQKRTLATS 1405


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,073,133
Number of Sequences: 2352
Number of extensions: 22855
Number of successful extensions: 30
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152053884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)