Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_F08
(1414 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.31
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 33 0.41
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.72
01_03_0005 + 11568545-11569119,11569179-11569191 27 1.0
03_02_0149 + 5933134-5933207,5935039-5935267,5935370-5935468,593... 31 1.7
03_01_0515 - 3864796-3865425 31 2.2
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 31 2.9
07_03_1136 + 24218601-24218734,24218769-24219906 30 3.8
06_01_0486 - 3455030-3455770 30 3.8
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 3.8
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 30 5.1
11_06_0610 - 25449085-25453284 29 6.7
12_02_1174 - 26696869-26698191 29 8.8
08_01_0059 - 394001-394708 29 8.8
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.9 bits (74), Expect = 0.31
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = -1
Query: 538 PXPPPRMXGXXXPXPXXXXXRSPXXE-NXXPPXXXXXXPRXXDKXXNPXKPPXXPPXXGG 362
P PPP+ P P P PP P P PP PP GG
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPP--PPPPGG 372
Query: 361 XKXAPP 344
K PP
Sbjct: 373 KKGGPP 378
Score = 33.1 bits (72), Expect = 0.54
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = -1
Query: 571 PRP*PPAXXXXPXPPPRMXGXXXPXPXXXXXRSPXXENXXPPXXXXXXPRXXDKXXNPXK 392
P P PA P PPP P P P PP P
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKG 375
Query: 391 PPXXPPXXGGXKXAP 347
P PP GG P
Sbjct: 376 GPPPPPPKGGASRPP 390
Score = 31.9 bits (69), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 900 PPPPXGXGXPXPXXKGXXGPXXEKXPPXP 814
PPPP P P KG P K PP P
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPP 356
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/77 (27%), Positives = 21/77 (27%), Gaps = 2/77 (2%)
Frame = -2
Query: 1077 PPXXKXXXXPPPXXPXXXXXPPXXXXPXGXK--KXXXXXXXXKKNXSXQGGEPXXXXGGV 904
PP PPP P PP P K K P GG
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGP 377
Query: 903 XPPPPXGXGXPXPXXKG 853
PPPP G P G
Sbjct: 378 PPPPPKGGASRPPAAPG 394
Score = 29.1 bits (62), Expect = 8.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 900 PPPPXGXGXPXPXXKGXXGPXXEKXPPXPGKK 805
PPPP G P P GP PP GKK
Sbjct: 345 PPPPPAKGPPPPPPP--KGPSPPPPPPPGGKK 374
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 33.5 bits (73), Expect = 0.41
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = -1
Query: 583 KKSXPRP*PPAXXXXPXPPPRMXGXXXPXPXXXXXRSPXXENXXPPXXXXXXP 425
KK P+P PP P PPP + P P P + PP P
Sbjct: 187 KKEEPQPPPPKEEEKPEPPPAVIIVEPPAPAPEPEPEPPKKEPPPPPPPKQEP 239
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.7 bits (71), Expect = 0.72
Identities = 22/86 (25%), Positives = 27/86 (31%)
Frame = -1
Query: 601 PSGPLFKKSXPRP*PPAXXXXPXPPPRMXGXXXPXPXXXXXRSPXXENXXPPXXXXXXPR 422
P PL + + PP P PPP + P P P N P P
Sbjct: 571 PPPPLPQSNYASSQPPP----PPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPP 626
Query: 421 XXDKXXNPXKPPXXPPXXGGXKXAPP 344
+ P PP PP + PP
Sbjct: 627 LPNHSVLPPPPPPPPPPSLPNRLVPP 652
Score = 31.1 bits (67), Expect = 2.2
Identities = 25/86 (29%), Positives = 26/86 (30%)
Frame = -1
Query: 601 PSGPLFKKSXPRP*PPAXXXXPXPPPRMXGXXXPXPXXXXXRSPXXENXXPPXXXXXXPR 422
P PL P P PP P PPP + P P P PP P
Sbjct: 590 PPPPLPNCLVPSPPPP-----PPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPP- 643
Query: 421 XXDKXXNPXKPPXXPPXXGGXKXAPP 344
N PP P G APP
Sbjct: 644 ---SLPNRLVPPPPAPGIGNKFPAPP 666
Score = 29.1 bits (62), Expect = 8.8
Identities = 20/74 (27%), Positives = 20/74 (27%), Gaps = 2/74 (2%)
Frame = -1
Query: 559 PPAXXXXPXPPP--RMXGXXXPXPXXXXXRSPXXENXXPPXXXXXXPRXXDKXXNPXKPP 386
P A P PPP R G P P PP K P PP
Sbjct: 709 PSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPP 768
Query: 385 XXPPXXGGXKXAPP 344
P G PP
Sbjct: 769 PQAPKPPGTVPPPP 782
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 27.5 bits (58), Expect(2) = 1.0
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 815 GXGGXFSXXGPXXPFXXGXGXPXPXGGGGXTPPXXXXG 928
G GG P P+ G G GGG PP G
Sbjct: 83 GGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGG 120
Score = 23.4 bits (48), Expect(2) = 1.0
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 1034 GXLGGGXXXXFXXGGXXFPXPXX-NPFLXF 1120
G GGG GG +P P NPFL +
Sbjct: 120 GGGGGGGWQQGGGGGGAYPTPPPPNPFLPY 149
>03_02_0149 + 5933134-5933207,5935039-5935267,5935370-5935468,
5935582-5935616,5935694-5935769,5936552-5936662,
5937001-5937087,5937302-5937395,5937489-5937606,
5938047-5938542,5939263-5939298,5940047-5940578,
5940668-5940792
Length = 703
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/71 (23%), Positives = 21/71 (29%)
Frame = -2
Query: 1077 PPXXKXXXXPPPXXPXXXXXPPXXXXPXGXKKXXXXXXXXKKNXSXQGGEPXXXXGGVXP 898
P K PPP P PP P K ++ +P + P
Sbjct: 534 PSASKNMLPPPPPPPRNMLPPPPKSMPPPPPKFPSNEMSRNEDRCADLNKPMAPPKSMPP 593
Query: 897 PPPXGXGXPXP 865
PPP P P
Sbjct: 594 PPPKSMPPPPP 604
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.1 bits (67), Expect = 2.2
Identities = 23/86 (26%), Positives = 26/86 (30%)
Frame = -1
Query: 601 PSGPLFKKSXPRP*PPAXXXXPXPPPRMXGXXXPXPXXXXXRSPXXENXXPPXXXXXXPR 422
PS P P PP+ P PP P P SP PP
Sbjct: 40 PSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPP-------- 91
Query: 421 XXDKXXNPXKPPXXPPXXGGXKXAPP 344
+P PP PP K +PP
Sbjct: 92 PPPPAASPPPPPPSPPPPSPVKSSPP 117
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = -1
Query: 571 PRP*PPAXXXXPXPPPRMXGXXXPXPXXXXXRS-PXXENXXPPXXXXXXPRXXDKXXNPX 395
P P PP P PPP++ P P S P N P P + P
Sbjct: 350 PPPPPPPPPPPPPPPPKLNTAPKPPPPPPPPPSVPSNNNLPKPAEPPAVPTSRRRLLKPL 409
Query: 394 KPPXXP 377
PP P
Sbjct: 410 -PPEGP 414
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 866 GXGXPXPXGGGGXTPPXXXXGSPP 937
G G P P GGGG PP G P
Sbjct: 94 GGGAPGPLGGGGARPPGGGGGGGP 117
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 936 GGEPXXXXGGVXPPPPXGXGXPXPXXKGXXGPXXEKXPPXPG 811
GG P GG PP G G P G PP PG
Sbjct: 95 GGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPG 136
>06_01_0486 - 3455030-3455770
Length = 246
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = -1
Query: 559 PPAXXXXPXPPPRMXGXXXPXPXXXXXRSPXXENXXPPXXXXXXPRXXDKXXNPXKPPXX 380
PP P PPP P P P PP P P PP
Sbjct: 77 PPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYV 136
Query: 379 PP 374
PP
Sbjct: 137 PP 138
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +2
Query: 749 GPXRXPXXXPLPXXXXXFXFFPGXGGXFSXXGPXXPFXXGXGXPXPXGGGGXTPP 913
G + P PLP P GG P P G P P GG PP
Sbjct: 1131 GGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPP 1185
Score = 30.3 bits (65), Expect = 3.8
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -1
Query: 571 PRP*PPAXXXXPXPPPRMXGXXXPXPXXXXXRSPXXENXXPPXXXXXXPRXXDKXXNPXK 392
P P PPA PPP G P P PP P P
Sbjct: 1161 PAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPP----GAPAPPMPPGVPGG 1216
Query: 391 PPXXPPXXGGXKXAPP 344
PP PP G APP
Sbjct: 1217 PP--PPPGGRGLPAPP 1230
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 936 GGEPXXXXGGVXPPPPXGXGXPXPXXKGXXGPXXEKXPPXPG 811
GG G PPPP G P P G P PP PG
Sbjct: 412 GGYTSQPYMGAPPPPPPGSYAPVPW--GQPPPYASYPPPPPG 451
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 6.7
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = -1
Query: 601 PSGPLFKKSXP--RP*PPAXXXXPXPPPRMXGXXXPXPXXXXXRSPXXENXXPPXXXXXX 428
P P+ P P PPA P PP + P P SP PP
Sbjct: 1218 PPAPVILPPPPVKSPPPPAPVISPPPPEKS-----PPPAAPVILSPPAVKSLPPPAPVSL 1272
Query: 427 PRXXDKXXNPXKPPXXPPXXGGXKXAPP 344
P K P P PP K PP
Sbjct: 1273 PPPPVKSLPPPAPVSLPPPV--VKSLPP 1298
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 8.8
Identities = 16/66 (24%), Positives = 19/66 (28%)
Frame = -1
Query: 571 PRP*PPAXXXXPXPPPRMXGXXXPXPXXXXXRSPXXENXXPPXXXXXXPRXXDKXXNPXK 392
P+P P P PPP P PP PR + +P
Sbjct: 210 PQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPP 269
Query: 391 PPXXPP 374
P PP
Sbjct: 270 PSPLPP 275
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = -1
Query: 571 PRP*PPAXXXXPXPPPRMXGXXXPXPXXXXXRSPXXENXXPPXXXXXXPRXXDKXXNPXK 392
PR PP P PP R P +P PP P P
Sbjct: 7 PRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVP 66
Query: 391 PPXXPP 374
PP PP
Sbjct: 67 PPPSPP 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,929,812
Number of Sequences: 37544
Number of extensions: 366095
Number of successful extensions: 1282
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4466811580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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