Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F08
         (1414 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.99 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   5.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   9.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.99
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +2

Query: 812 PGXGGXFSXXGPXXPFXXGXGXPXPXGGGG 901
           PG GG  S  G         G P P GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 5.3
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = -2

Query: 900 PPPPXGXGXPXPXXKGXXGPXXEKXPPXP 814
           PPPP     P P   G  G      PP P
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 9.2
 Identities = 19/75 (25%), Positives = 24/75 (32%)
 Frame = -2

Query: 1077 PPXXKXXXXPPPXXPXXXXXPPXXXXPXGXKKXXXXXXXXKKNXSXQGGEPXXXXGGVXP 898
            PP  +    PP         PP    P G  +         +N +  GG P    G   P
Sbjct: 248  PPSAQGMQRPPMMGQPPPIRPPN---PMGGPRPQISP----QNSNLSGGMPSGMVGPPRP 300

Query: 897  PPPXGXGXPXPXXKG 853
            P P   G P    +G
Sbjct: 301  PMPMQGGAPGGPPQG 315


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,826
Number of Sequences: 2352
Number of extensions: 7749
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 163777185
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)