Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F07
         (1266 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0147 + 12763526-12763815,12763938-12764067,12764185-127644...    31   2.5  
01_06_0272 - 28065896-28065991,28066069-28066227,28066918-280669...    30   4.4  
11_01_0632 - 5069425-5069441,5070656-5070809,5070889-5071050,507...    29   7.8  

>09_03_0147 +
           12763526-12763815,12763938-12764067,12764185-12764435,
           12764546-12764750,12764878-12764918,12765006-12765131,
           12765429-12765502,12765671-12765891,12766251-12766345,
           12766463-12766679,12766781-12766906,12766988-12767086,
           12767171-12767380,12767496-12767606
          Length = 731

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = +2

Query: 257 GQHIVFVASVLWMQGPQMTLQPLENECGILLYNGDIFDESWDSRTSDTQIIM 412
           G  + +  ++ WM GP +    L N   + LYNG +    +     D ++ M
Sbjct: 401 GDVVAWPTNLGWMMGPWLVYASLLNGASMALYNGSLNSSGFAKFVQDAKVTM 452


>01_06_0272 -
           28065896-28065991,28066069-28066227,28066918-28066966,
           28067350-28067474,28067834-28068004,28068222-28068571,
           28069322-28069478
          Length = 368

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -2

Query: 770 EYGGAPHPLPSARASLLDPS*VFHELAVVGKKIVFALREKSRTSHPACL 624
           E GGA  P PS  +S L P   FH    V K+       +++   P CL
Sbjct: 128 EGGGAQLPPPSINSSSLLPGNSFHSNVTVLKRAFEIATSQTQVEQPMCL 176


>11_01_0632 -
           5069425-5069441,5070656-5070809,5070889-5071050,
           5071270-5072199
          Length = 420

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = -1

Query: 420 SFSMIICV-SLVLLSQDSSNISPLYKRMPH------SFSRGCNVICG 301
           SF   ICV SLV L  DS++ +PL + MP         + GC+ +CG
Sbjct: 220 SFRTKICVPSLVSLQLDSNSKTPLLESMPSLAEATVRVTAGCSDVCG 266


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,014,578
Number of Sequences: 37544
Number of extensions: 531237
Number of successful extensions: 1299
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3922562724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)