Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F07
         (1266 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069456-1|AAL39601.1|  564|Drosophila melanogaster LD18112p pro...    57   6e-08
AE013599-20|EAA45987.2|  575|Drosophila melanogaster CG17486-PA ...    57   6e-08

>AY069456-1|AAL39601.1|  564|Drosophila melanogaster LD18112p
           protein.
          Length = 564

 Score = 56.8 bits (131), Expect = 6e-08
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
 Frame = +2

Query: 131 MCGIFLEL----SCEKCSIVNDIDVLRRLKNRGPDHLQRKDFISEIGQHIVFVASVLWMQ 298
           MCGIF  +         +I + + V+  LKNRGPD +Q +  I      I+F   VLW Q
Sbjct: 1   MCGIFCSVVNNVPLNSFNISSALKVI--LKNRGPD-VQDEVVIDYCFGKILFAGFVLWQQ 57

Query: 299 GPQMTLQPLENECGILLYNGDIFDESWDSRTSDTQIIMEKLS 424
           G  +  QP+  +  I L+NGDI++ S     SDT  I E+L+
Sbjct: 58  GESVQKQPVVEDDFIFLFNGDIYNTSKPEYMSDTTWIAERLA 99


>AE013599-20|EAA45987.2|  575|Drosophila melanogaster CG17486-PA
           protein.
          Length = 575

 Score = 56.8 bits (131), Expect = 6e-08
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
 Frame = +2

Query: 131 MCGIFLEL----SCEKCSIVNDIDVLRRLKNRGPDHLQRKDFISEIGQHIVFVASVLWMQ 298
           MCGIF  +         +I + + V+  LKNRGPD +Q +  I      I+F   VLW Q
Sbjct: 12  MCGIFCSVVNNVPLNSFNISSALKVI--LKNRGPD-VQDEVVIDYCFGKILFAGFVLWQQ 68

Query: 299 GPQMTLQPLENECGILLYNGDIFDESWDSRTSDTQIIMEKLS 424
           G  +  QP+  +  I L+NGDI++ S     SDT  I E+L+
Sbjct: 69  GESVQKQPVVEDDFIFLFNGDIYNTSKPEYMSDTTWIAERLA 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,215,914
Number of Sequences: 53049
Number of extensions: 907771
Number of successful extensions: 2012
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2012
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6804617070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)