Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_F05
(1352 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85373-1|CAA59689.1| 76|Homo sapiens Sm protein G protein. 100 1e-20
CR456918-1|CAG33199.1| 76|Homo sapiens SNRPG protein. 100 1e-20
BC106055-1|AAI06056.1| 76|Homo sapiens small nuclear ribonucle... 100 1e-20
BC071880-1|AAH71880.1| 76|Homo sapiens small nuclear ribonucle... 100 1e-20
BC070166-1|AAH70166.1| 76|Homo sapiens small nuclear ribonucle... 100 1e-20
BC066302-1|AAH66302.1| 76|Homo sapiens small nuclear ribonucle... 100 1e-20
BC022432-1|AAH22432.1| 76|Homo sapiens small nuclear ribonucle... 100 1e-20
BC000070-1|AAH00070.1| 76|Homo sapiens small nuclear ribonucle... 100 1e-20
AC079338-2|AAX81996.1| 76|Homo sapiens unknown protein. 100 1e-20
BC035103-1|AAH35103.1| 64|Homo sapiens SNRPG protein protein. 100 1e-20
BC018621-1|AAH18621.1| 103|Homo sapiens LSM7 homolog, U6 small ... 50 1e-05
AF182293-1|AAD56231.1| 103|Homo sapiens U6 snRNA-associated Sm-... 50 1e-05
AC005258-2|AAG45442.1| 103|Homo sapiens U6 snRNA-associated Sm-... 50 1e-05
AC005258-1|AAC25622.1| 145|Homo sapiens R30783_1 protein. 44 0.001
X12466-1|CAA31007.1| 92|Homo sapiens protein ( Human mRNA for ... 42 0.005
M37716-1|AAA90926.1| 92|Homo sapiens small nuclear RNA protein... 42 0.005
M21258-1|AAB59365.1| 92|Homo sapiens protein ( Human small nuc... 42 0.005
M15919-1|AAA36621.1| 81|Homo sapiens protein ( Human autoimmun... 42 0.005
BC090951-1|AAH90951.1| 92|Homo sapiens small nuclear ribonucle... 42 0.005
BC002639-1|AAH02639.1| 92|Homo sapiens small nuclear ribonucle... 42 0.005
AL354707-4|CAH73282.1| 92|Homo sapiens small nuclear ribonucle... 42 0.005
BC022440-1|AAH22440.1| 96|Homo sapiens LSM8 homolog, U6 small ... 42 0.007
BC016026-1|AAH16026.1| 80|Homo sapiens LSM6 homolog, U6 small ... 42 0.007
BC002742-1|AAH02742.1| 96|Homo sapiens LSM8 homolog, U6 small ... 42 0.007
AJ238098-1|CAB45869.1| 80|Homo sapiens Lsm6 protein protein. 42 0.007
AF182294-1|AAD56232.1| 96|Homo sapiens U6 snRNA-associated Sm-... 42 0.007
AF182292-1|AAD56230.1| 80|Homo sapiens U6 snRNA-associated Sm-... 42 0.007
AC097372-1|AAY41032.1| 80|Homo sapiens unknown protein. 42 0.007
AC006389-1|AAD15542.1| 96|Homo sapiens WUGSC:H_RG437B22.1 prot... 42 0.007
BC045532-1|AAH45532.1| 67|Homo sapiens LSM8 protein protein. 38 0.063
BC005938-1|AAH05938.1| 91|Homo sapiens LSM5 homolog, U6 small ... 38 0.11
AJ238097-1|CAB45868.1| 91|Homo sapiens Lsm5 protein protein. 38 0.11
AF182291-1|AAD56229.1| 91|Homo sapiens U6 snRNA-associated Sm-... 38 0.11
K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary ... 35 0.59
S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein. 35 0.78
K03208-1|AAA60189.1| 251|Homo sapiens PRB2 protein. 35 0.78
X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich pro... 34 1.4
S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein. 34 1.4
S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor p... 34 1.4
S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-ri... 34 1.4
M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich pro... 34 1.4
K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein. 34 1.4
BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein. 34 1.4
X85372-1|CAA59688.1| 86|Homo sapiens Sm protein F protein. 32 5.5
CR456751-1|CAG33032.1| 86|Homo sapiens SNRPF protein. 32 5.5
BC128453-1|AAI28454.1| 86|Homo sapiens small nuclear ribonucle... 32 5.5
BC128452-1|AAI28453.1| 86|Homo sapiens small nuclear ribonucle... 32 5.5
BC063397-1|AAH63397.2| 86|Homo sapiens SNRPF protein protein. 32 5.5
BC002505-1|AAH02505.3| 86|Homo sapiens small nuclear ribonucle... 32 5.5
>X85373-1|CAA59689.1| 76|Homo sapiens Sm protein G protein.
Length = 76
Score = 100 bits (240), Expect = 1e-20
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIM 312
K KKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NN+GMVVIRGNSIIM
Sbjct: 10 KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 69
Query: 313 LESLDRL 333
LE+L+R+
Sbjct: 70 LEALERV 76
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 105 MSKAHPPELKKFMDKKIVNKAECG 176
MSKAHPPELKKFMDKK+ K G
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGG 24
>CR456918-1|CAG33199.1| 76|Homo sapiens SNRPG protein.
Length = 76
Score = 100 bits (240), Expect = 1e-20
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIM 312
K KKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NN+GMVVIRGNSIIM
Sbjct: 10 KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 69
Query: 313 LESLDRL 333
LE+L+R+
Sbjct: 70 LEALERV 76
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 105 MSKAHPPELKKFMDKKIVNKAECG 176
MSKAHPPELKKFMDKK+ K G
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGG 24
>BC106055-1|AAI06056.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 100 bits (240), Expect = 1e-20
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIM 312
K KKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NN+GMVVIRGNSIIM
Sbjct: 10 KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 69
Query: 313 LESLDRL 333
LE+L+R+
Sbjct: 70 LEALERV 76
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 105 MSKAHPPELKKFMDKKIVNKAECG 176
MSKAHPPELKKFMDKK+ K G
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGG 24
>BC071880-1|AAH71880.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 100 bits (240), Expect = 1e-20
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIM 312
K KKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NN+GMVVIRGNSIIM
Sbjct: 10 KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 69
Query: 313 LESLDRL 333
LE+L+R+
Sbjct: 70 LEALERV 76
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 105 MSKAHPPELKKFMDKKIVNKAECG 176
MSKAHPPELKKFMDKK+ K G
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGG 24
>BC070166-1|AAH70166.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 100 bits (240), Expect = 1e-20
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIM 312
K KKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NN+GMVVIRGNSIIM
Sbjct: 10 KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 69
Query: 313 LESLDRL 333
LE+L+R+
Sbjct: 70 LEALERV 76
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 105 MSKAHPPELKKFMDKKIVNKAECG 176
MSKAHPPELKKFMDKK+ K G
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGG 24
>BC066302-1|AAH66302.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 100 bits (240), Expect = 1e-20
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIM 312
K KKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NN+GMVVIRGNSIIM
Sbjct: 10 KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 69
Query: 313 LESLDRL 333
LE+L+R+
Sbjct: 70 LEALERV 76
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 105 MSKAHPPELKKFMDKKIVNKAECG 176
MSKAHPPELKKFMDKK+ K G
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGG 24
>BC022432-1|AAH22432.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 100 bits (240), Expect = 1e-20
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIM 312
K KKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NN+GMVVIRGNSIIM
Sbjct: 10 KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 69
Query: 313 LESLDRL 333
LE+L+R+
Sbjct: 70 LEALERV 76
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 105 MSKAHPPELKKFMDKKIVNKAECG 176
MSKAHPPELKKFMDKK+ K G
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGG 24
>BC000070-1|AAH00070.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 100 bits (240), Expect = 1e-20
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIM 312
K KKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NN+GMVVIRGNSIIM
Sbjct: 10 KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 69
Query: 313 LESLDRL 333
LE+L+R+
Sbjct: 70 LEALERV 76
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 105 MSKAHPPELKKFMDKKIVNKAECG 176
MSKAHPPELKKFMDKK+ K G
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGG 24
>AC079338-2|AAX81996.1| 76|Homo sapiens unknown protein.
Length = 76
Score = 100 bits (240), Expect = 1e-20
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIM 312
K KKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NN+GMVVIRGNSIIM
Sbjct: 10 KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 69
Query: 313 LESLDRL 333
LE+L+R+
Sbjct: 70 LEALERV 76
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 105 MSKAHPPELKKFMDKKIVNKAECG 176
MSKAHPPELKKFMDKK+ K G
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGG 24
>BC035103-1|AAH35103.1| 64|Homo sapiens SNRPG protein protein.
Length = 64
Score = 100 bits (239), Expect = 1e-20
Identities = 46/62 (74%), Positives = 54/62 (87%)
Frame = +1
Query: 148 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIMLESLD 327
KKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NN+GMVVIRGNSIIMLE+L+
Sbjct: 3 KKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEALE 62
Query: 328 RL 333
R+
Sbjct: 63 RV 64
>BC018621-1|AAH18621.1| 103|Homo sapiens LSM7 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 103
Score = 50.4 bits (115), Expect = 1e-05
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Frame = +1
Query: 148 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD--------GQRNNVGMVVIRGNS 303
K + +K GR +G+L+GFDP +NLVLD ++E +D +G+VV RG S
Sbjct: 21 KTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTS 80
Query: 304 IIML 315
++++
Sbjct: 81 VVLI 84
>AF182293-1|AAD56231.1| 103|Homo sapiens U6 snRNA-associated
Sm-like protein LSm7 protein.
Length = 103
Score = 50.4 bits (115), Expect = 1e-05
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Frame = +1
Query: 148 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD--------GQRNNVGMVVIRGNS 303
K + +K GR +G+L+GFDP +NLVLD ++E +D +G+VV RG S
Sbjct: 21 KTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTS 80
Query: 304 IIML 315
++++
Sbjct: 81 VVLI 84
>AC005258-2|AAG45442.1| 103|Homo sapiens U6 snRNA-associated
Sm-like protein LSm7 protein.
Length = 103
Score = 50.4 bits (115), Expect = 1e-05
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Frame = +1
Query: 148 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD--------GQRNNVGMVVIRGNS 303
K + +K GR +G+L+GFDP +NLVLD ++E +D +G+VV RG S
Sbjct: 21 KTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTS 80
Query: 304 IIML 315
++++
Sbjct: 81 VVLI 84
>AC005258-1|AAC25622.1| 145|Homo sapiens R30783_1 protein.
Length = 145
Score = 44.0 bits (99), Expect = 0.001
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Frame = +1
Query: 175 GRAVTGVLRGFDPFMNLVLDESVEECKD--------GQRNNVGMVVIRGNSIIML 315
GR +G+L+GFDP +NLVLD ++E +D +G+VV RG S++++
Sbjct: 72 GRPRSGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLI 126
>X12466-1|CAA31007.1| 92|Homo sapiens protein ( Human mRNA for
snRNP E protein. ).
Length = 92
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 VTGVLRGFDPFMNLVLDESVE-ECKDGQRNNVGMVVIRGNSIIMLESL 324
+ G + GFD +MNLVLD++ E K R +G ++++G++I +L+S+
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 90
>M37716-1|AAA90926.1| 92|Homo sapiens small nuclear RNA protein
(snRNP E) protein.
Length = 92
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 VTGVLRGFDPFMNLVLDESVE-ECKDGQRNNVGMVVIRGNSIIMLESL 324
+ G + GFD +MNLVLD++ E K R +G ++++G++I +L+S+
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 90
>M21258-1|AAB59365.1| 92|Homo sapiens protein ( Human small
nuclear ribonucleoprotein (snRNP) E gene, exon 5 and Alu
repeats copy N and O. ).
Length = 92
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 VTGVLRGFDPFMNLVLDESVE-ECKDGQRNNVGMVVIRGNSIIMLESL 324
+ G + GFD +MNLVLD++ E K R +G ++++G++I +L+S+
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 90
>M15919-1|AAA36621.1| 81|Homo sapiens protein ( Human autoimmune
antigen small nuclear ribonucleoprotein E mRNA. ).
Length = 81
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 VTGVLRGFDPFMNLVLDESVE-ECKDGQRNNVGMVVIRGNSIIMLESL 324
+ G + GFD +MNLVLD++ E K R +G ++++G++I +L+S+
Sbjct: 32 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 79
>BC090951-1|AAH90951.1| 92|Homo sapiens small nuclear
ribonucleoprotein polypeptide E protein.
Length = 92
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 VTGVLRGFDPFMNLVLDESVE-ECKDGQRNNVGMVVIRGNSIIMLESL 324
+ G + GFD +MNLVLD++ E K R +G ++++G++I +L+S+
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 90
>BC002639-1|AAH02639.1| 92|Homo sapiens small nuclear
ribonucleoprotein polypeptide E protein.
Length = 92
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 VTGVLRGFDPFMNLVLDESVE-ECKDGQRNNVGMVVIRGNSIIMLESL 324
+ G + GFD +MNLVLD++ E K R +G ++++G++I +L+S+
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 90
>AL354707-4|CAH73282.1| 92|Homo sapiens small nuclear
ribonucleoprotein polypeptide E-like 1 protein.
Length = 92
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 VTGVLRGFDPFMNLVLDESVE-ECKDGQRNNVGMVVIRGNSIIMLESL 324
+ G + GFD +MNLVLD++ E K R +G ++++G++I +L+S+
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 90
>BC022440-1|AAH22440.1| 96|Homo sapiens LSM8 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.007
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRN----NVGMVVIRGN 300
+N + +++ + GR + G L+GFD +NL+LDES E + +G+ ++RG+
Sbjct: 6 ENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGD 65
Query: 301 SIIMLESLD 327
++ ++ +D
Sbjct: 66 NVAVIGEID 74
>BC016026-1|AAH16026.1| 80|Homo sapiens LSM6 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 80
Score = 41.5 bits (93), Expect = 0.007
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 160 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RNNVGMVVIRGNSIIMLESLDR 330
+KLN+G GVL D +MN+ L E EE +GQ +N G IRGN+++ + + R
Sbjct: 22 VKLNSGVDYRGVLACLDGYMNIAL-EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKR 78
>BC002742-1|AAH02742.1| 96|Homo sapiens LSM8 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.007
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRN----NVGMVVIRGN 300
+N + +++ + GR + G L+GFD +NL+LDES E + +G+ ++RG+
Sbjct: 6 ENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGD 65
Query: 301 SIIMLESLD 327
++ ++ +D
Sbjct: 66 NVAVIGEID 74
>AJ238098-1|CAB45869.1| 80|Homo sapiens Lsm6 protein protein.
Length = 80
Score = 41.5 bits (93), Expect = 0.007
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 160 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RNNVGMVVIRGNSIIMLESLDR 330
+KLN+G GVL D +MN+ L E EE +GQ +N G IRGN+++ + + R
Sbjct: 22 VKLNSGVDYRGVLACLDGYMNIAL-EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKR 78
>AF182294-1|AAD56232.1| 96|Homo sapiens U6 snRNA-associated
Sm-like protein LSm8 protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.007
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRN----NVGMVVIRGN 300
+N + +++ + GR + G L+GFD +NL+LDES E + +G+ ++RG+
Sbjct: 6 ENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGD 65
Query: 301 SIIMLESLD 327
++ ++ +D
Sbjct: 66 NVAVIGEID 74
>AF182292-1|AAD56230.1| 80|Homo sapiens U6 snRNA-associated
Sm-like protein LSm6 protein.
Length = 80
Score = 41.5 bits (93), Expect = 0.007
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 160 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RNNVGMVVIRGNSIIMLESLDR 330
+KLN+G GVL D +MN+ L E EE +GQ +N G IRGN+++ + + R
Sbjct: 22 VKLNSGVDYRGVLACLDGYMNIAL-EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKR 78
>AC097372-1|AAY41032.1| 80|Homo sapiens unknown protein.
Length = 80
Score = 41.5 bits (93), Expect = 0.007
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 160 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RNNVGMVVIRGNSIIMLESLDR 330
+KLN+G GVL D +MN+ L E EE +GQ +N G IRGN+++ + + R
Sbjct: 22 VKLNSGVDYRGVLACLDGYMNIAL-EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKR 78
>AC006389-1|AAD15542.1| 96|Homo sapiens WUGSC:H_RG437B22.1
protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.007
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRN----NVGMVVIRGN 300
+N + +++ + GR + G L+GFD +NL+LDES E + +G+ ++RG+
Sbjct: 6 ENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGD 65
Query: 301 SIIMLESLD 327
++ ++ +D
Sbjct: 66 NVAVIGEID 74
>BC045532-1|AAH45532.1| 67|Homo sapiens LSM8 protein protein.
Length = 67
Score = 38.3 bits (85), Expect = 0.063
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +1
Query: 133 KNSWTKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRN----NVGMVVIRGN 300
+N + +++ + GR + G L+GFD +NL+LDES E + +G+ ++RG+
Sbjct: 6 ENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGD 65
Query: 301 SI 306
++
Sbjct: 66 NV 67
>BC005938-1|AAH05938.1| 91|Homo sapiens LSM5 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 91
Score = 37.5 bits (83), Expect = 0.11
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 151 KLSIKLNAGRAVTGVLRGFDPFMNLVLDE--SVEECKDGQR-NNVGMVVIRGNSIIML 315
++ I + + + + G L GFD F+N+VL++ E +G+R + +++ GN+I ML
Sbjct: 25 RIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 82
>AJ238097-1|CAB45868.1| 91|Homo sapiens Lsm5 protein protein.
Length = 91
Score = 37.5 bits (83), Expect = 0.11
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 151 KLSIKLNAGRAVTGVLRGFDPFMNLVLDE--SVEECKDGQR-NNVGMVVIRGNSIIML 315
++ I + + + + G L GFD F+N+VL++ E +G+R + +++ GN+I ML
Sbjct: 25 RIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 82
>AF182291-1|AAD56229.1| 91|Homo sapiens U6 snRNA-associated
Sm-like protein LSm5 protein.
Length = 91
Score = 37.5 bits (83), Expect = 0.11
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 151 KLSIKLNAGRAVTGVLRGFDPFMNLVLDE--SVEECKDGQR-NNVGMVVIRGNSIIML 315
++ I + + + + G L GFD F+N+VL++ E +G+R + +++ GN+I ML
Sbjct: 25 RIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 82
>K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary
proline-rich protein 1 gene, segment 1. ).
Length = 173
Score = 35.1 bits (77), Expect = 0.59
Identities = 32/145 (22%), Positives = 32/145 (22%)
Frame = +1
Query: 892 PPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXXGXXX 1071
PP G G P P G P G PP G
Sbjct: 22 PPPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGKRSRSPRSPPGKP 81
Query: 1072 GXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPPXXXXXXXXXXXX 1251
P G G PPPP P GG P G PP
Sbjct: 82 QGPPPQG--GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPR 139
Query: 1252 XPXXXGXGGXXXPXXXXXXGGXPXG 1326
P G P G P G
Sbjct: 140 KPQGPPPQGGNQPQGPPPPPGKPQG 164
>S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein.
Length = 382
Score = 34.7 bits (76), Expect = 0.78
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP G
Sbjct: 207 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKSQGPPPPGKPQGPPPQGGSKSRSSRSP 266
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
P G G PPPP P GG P G PP
Sbjct: 267 PGKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 316
Score = 33.9 bits (74), Expect = 1.4
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP
Sbjct: 22 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPP 81
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G PP
Sbjct: 82 GKPQGPPPQGG---NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 130
Score = 31.1 bits (67), Expect = 9.6
Identities = 26/112 (23%), Positives = 26/112 (23%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP
Sbjct: 83 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSP 142
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
P G G PPPP P GG P G PP
Sbjct: 143 PGKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 192
>K03208-1|AAA60189.1| 251|Homo sapiens PRB2 protein.
Length = 251
Score = 34.7 bits (76), Expect = 0.78
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP G
Sbjct: 76 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGDNKSQGPPPPGKPQGPPPQGGSKSRSSRSP 135
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
P G G PPPP P GG P G PP
Sbjct: 136 PGKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 185
>X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich protein
protein.
Length = 297
Score = 33.9 bits (74), Expect = 1.4
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP
Sbjct: 62 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPP 121
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G PP
Sbjct: 122 GKPQGPPPQGG---NQPQGPPPPPGKPQGPPQQGGNRPQGPPPPGKPQGPPP 170
Score = 31.5 bits (68), Expect = 7.3
Identities = 30/114 (26%), Positives = 30/114 (26%), Gaps = 2/114 (1%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGX--GXXXPXGXXGXPPXXGXPXXKXX 1053
K PP G G P P P G G P G PP
Sbjct: 123 KPQGPPPQGGNQPQGPPP--PPGKPQGPPQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQS 180
Query: 1054 XXGXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G P PP
Sbjct: 181 PPGKPQGPPPQGG---NQPQGPPPPPGKPQGPPPQGGNKPQG-PPPPGKPQGPP 230
>S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein.
Length = 358
Score = 33.9 bits (74), Expect = 1.4
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP
Sbjct: 62 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPP 121
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G PP
Sbjct: 122 GKPQGPPPQGG---NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 170
Score = 33.9 bits (74), Expect = 1.4
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP
Sbjct: 123 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPP 182
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G PP
Sbjct: 183 GKPQGPPPQGG---NQPQGPPPPPGKPQGPPQQGGNRPQGPPPPGKPQGPPP 231
Score = 31.9 bits (69), Expect = 5.5
Identities = 29/114 (25%), Positives = 29/114 (25%), Gaps = 2/114 (1%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGX--GXXXPXGXXGXPPXXGXPXXKXX 1053
K PP G G P P P G G P G PP
Sbjct: 184 KPQGPPPQGGNQPQGPPP--PPGKPQGPPQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQS 241
Query: 1054 XXGXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G PP
Sbjct: 242 PPGKPQGPPPQGG---NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 292
>S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor
protein.
Length = 297
Score = 33.9 bits (74), Expect = 1.4
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP
Sbjct: 62 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPP 121
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G PP
Sbjct: 122 GKPQGPPPQGG---NQPQGPPPPPGKPQGPPQQGGNRPQGPPPPGKPQGPPP 170
Score = 31.5 bits (68), Expect = 7.3
Identities = 30/114 (26%), Positives = 30/114 (26%), Gaps = 2/114 (1%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGX--GXXXPXGXXGXPPXXGXPXXKXX 1053
K PP G G P P P G G P G PP
Sbjct: 123 KPQGPPPQGGNQPQGPPP--PPGKPQGPPQQGGNRPQGPPPPGKPQGPPPQGDKSQSPQS 180
Query: 1054 XXGXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G P PP
Sbjct: 181 PPGKPQGPPPQGG---NQPQGPPPPPGKPQGPPPQGGNKPQG-PPPPGKPQGPP 230
>S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-rich
protein protein.
Length = 331
Score = 33.9 bits (74), Expect = 1.4
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP
Sbjct: 96 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPP 155
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G PP
Sbjct: 156 GKPQGPPPQGG---NQPQGPPPPPGKPQGPPQQGGNRPQGPPPPGKPQGPPP 204
Score = 31.5 bits (68), Expect = 7.3
Identities = 30/114 (26%), Positives = 30/114 (26%), Gaps = 2/114 (1%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGX--GXXXPXGXXGXPPXXGXPXXKXX 1053
K PP G G P P P G G P G PP
Sbjct: 157 KPQGPPPQGGNQPQGPPP--PPGKPQGPPQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQS 214
Query: 1054 XXGXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G P PP
Sbjct: 215 PPGKPQGPPPQGG---NQPQGPPPPPGKPQGPPPQGGNKPQG-PPPPGKPQGPP 264
>M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich protein
protein.
Length = 331
Score = 33.9 bits (74), Expect = 1.4
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP
Sbjct: 96 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPP 155
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G PP
Sbjct: 156 GKPQGPPPQGG---NQPQGPPPPPGKPQGPPQQGGNRPQGPPPPGKPQGPPP 204
Score = 31.5 bits (68), Expect = 7.3
Identities = 30/114 (26%), Positives = 30/114 (26%), Gaps = 2/114 (1%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGX--GXXXPXGXXGXPPXXGXPXXKXX 1053
K PP G G P P P G G P G PP
Sbjct: 157 KPQGPPPQGGNQPQGPPP--PPGKPQGPPQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQS 214
Query: 1054 XXGXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G P PP
Sbjct: 215 PPGKPQGPPPQGG---NQPQGPPPPPGKPQGPPPQGGNKPQG-PPPPGKPQGPP 264
>K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein.
Length = 331
Score = 33.9 bits (74), Expect = 1.4
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP
Sbjct: 96 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPP 155
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G PP
Sbjct: 156 GKPQGPPPQGG---NQPQGPPPPPGKPQGPPQQGGNRPQGPPPPGKPQGPPP 204
Score = 31.5 bits (68), Expect = 7.3
Identities = 30/114 (26%), Positives = 30/114 (26%), Gaps = 2/114 (1%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGX--GXXXPXGXXGXPPXXGXPXXKXX 1053
K PP G G P P P G G P G PP
Sbjct: 157 KPQGPPPQGGNQPQGPPP--PPGKPQGPPQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQS 214
Query: 1054 XXGXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G P PP
Sbjct: 215 PPGKPQGPPPQGG---NQPQGPPPPPGKPQGPPPQGGNKPQG-PPPPGKPQGPP 264
>BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein.
Length = 338
Score = 33.9 bits (74), Expect = 1.4
Identities = 27/112 (24%), Positives = 27/112 (24%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGXGXXXPXGXXGXPPXXGXPXXKXXXX 1059
K PP G G P P G P G PP
Sbjct: 103 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPP 162
Query: 1060 GXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G PP
Sbjct: 163 GKPQGPPPQGG---NQPQGPPPPPGKPQGPPQQGGNRPQGPPPPGKPQGPPP 211
Score = 31.5 bits (68), Expect = 7.3
Identities = 30/114 (26%), Positives = 30/114 (26%), Gaps = 2/114 (1%)
Frame = +1
Query: 880 KXXPPPXXXGXXFXGXXPXXPXXXXXXPXXXXGGX--GXXXPXGXXGXPPXXGXPXXKXX 1053
K PP G G P P P G G P G PP
Sbjct: 164 KPQGPPPQGGNQPQGPPP--PPGKPQGPPQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQS 221
Query: 1054 XXGXXXGXXPXXGXXGGXXXXPPPPXXXXXXXPXXGGGXPXGXXXXXXSPXXPP 1215
G G P G PPPP P GG P G P PP
Sbjct: 222 PPGKPQGPPPQGG---NQPQGPPPPPGKPQGPPPQGGNKPQG-PPPPGKPQGPP 271
>X85372-1|CAA59688.1| 86|Homo sapiens Sm protein F protein.
Length = 86
Score = 31.9 bits (69), Expect = 5.5
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 148 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIMLESLD 327
K + +KL G G L D +MN+ L + E ++G V+IR N+++ + ++
Sbjct: 17 KPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVE 76
>CR456751-1|CAG33032.1| 86|Homo sapiens SNRPF protein.
Length = 86
Score = 31.9 bits (69), Expect = 5.5
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 148 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIMLESLD 327
K + +KL G G L D +MN+ L + E ++G V+IR N+++ + ++
Sbjct: 17 KPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVE 76
>BC128453-1|AAI28454.1| 86|Homo sapiens small nuclear
ribonucleoprotein polypeptide F protein.
Length = 86
Score = 31.9 bits (69), Expect = 5.5
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 148 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIMLESLD 327
K + +KL G G L D +MN+ L + E ++G V+IR N+++ + ++
Sbjct: 17 KPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVE 76
>BC128452-1|AAI28453.1| 86|Homo sapiens small nuclear
ribonucleoprotein polypeptide F protein.
Length = 86
Score = 31.9 bits (69), Expect = 5.5
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 148 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIMLESLD 327
K + +KL G G L D +MN+ L + E ++G V+IR N+++ + ++
Sbjct: 17 KPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVE 76
>BC063397-1|AAH63397.2| 86|Homo sapiens SNRPF protein protein.
Length = 86
Score = 31.9 bits (69), Expect = 5.5
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 148 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIMLESLD 327
K + +KL G G L D +MN+ L + E ++G V+IR N+++ + ++
Sbjct: 17 KPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVE 76
>BC002505-1|AAH02505.3| 86|Homo sapiens small nuclear
ribonucleoprotein polypeptide F protein.
Length = 86
Score = 31.9 bits (69), Expect = 5.5
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 148 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVVIRGNSIIMLESLD 327
K + +KL G G L D +MN+ L + E ++G V+IR N+++ + ++
Sbjct: 17 KPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVE 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,721,799
Number of Sequences: 237096
Number of extensions: 2638444
Number of successful extensions: 6855
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 3634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6501
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19566860838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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