Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F04
         (1328 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572...    53   4e-07
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456...    49   7e-06
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367...    49   7e-06
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585...    48   2e-05
02_05_0849 + 32202610-32202880,32204234-32205711,32205993-322061...    31   2.0  

>07_01_0747 -
           5724586-5724648,5725229-5725309,5725564-5725656,
           5725775-5725929,5726023-5726131,5726291-5726481,
           5727463-5727614,5728453-5728728,5729415-5729587,
           5730023-5730298,5730839-5730958,5731051-5731176,
           5731629-5731970
          Length = 718

 Score = 53.2 bits (122), Expect = 4e-07
 Identities = 28/87 (32%), Positives = 44/87 (50%)
 Frame = +1

Query: 19  GNSXDSLXXXRAKNLRGDYHGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRV 198
           G   ++L   +  NL   + G   LGF  LT VP Q + +D  +L+  EI+++N YH  V
Sbjct: 636 GIRIENLLLVKEVNLPNSFGGVSYLGFEKLTFVPIQSKLVDLSLLSPSEINWINEYHDEV 695

Query: 199 LDTLSPILKERGLLKDLEWLEGQCIPI 279
            + +SP+L        L+WL     P+
Sbjct: 696 WEKVSPLLSGH----SLDWLRKNTRPL 718


>11_05_0099 -
           19044772-19044837,19044896-19045051,19045529-19045653,
           19045773-19045844,19045947-19046051,19046509-19046563,
           19047334-19047414,19047499-19047633,19048279-19048342,
           19048844-19048911,19049082-19049168,19050247-19050501,
           19050616-19050738,19050866-19051150,19051712-19051851,
           19052385-19052445,19052537-19052637,19052807-19052870,
           19053020-19053127
          Length = 716

 Score = 49.2 bits (112), Expect = 7e-06
 Identities = 28/87 (32%), Positives = 42/87 (48%)
 Frame = +1

Query: 19  GNSXDSLXXXRAKNLRGDYHGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRV 198
           G   +++   +  N + ++  +G L F  +T  P Q + ID  +LT  EI +VNAYH   
Sbjct: 612 GIRLENVLIVKEANTKYNFGDKGYLAFEHITWAPYQTKLIDTTLLTPAEIEWVNAYHADC 671

Query: 199 LDTLSPILKERGLLKDLEWLEGQCIPI 279
              L P L E    ++ EWL     PI
Sbjct: 672 RKILQPYLNE----QEKEWLRKATEPI 694


>06_03_1033 -
           27035977-27036144,27036420-27036544,27036695-27036766,
           27036872-27036976,27037513-27037567,27038196-27038276,
           27039109-27039159,27039531-27039594,27040783-27040850,
           27040993-27041079,27041401-27041655,27041768-27041890,
           27042013-27042297,27042948-27043087,27043696-27043759,
           27043929-27044048
          Length = 620

 Score = 49.2 bits (112), Expect = 7e-06
 Identities = 28/87 (32%), Positives = 42/87 (48%)
 Frame = +1

Query: 19  GNSXDSLXXXRAKNLRGDYHGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRV 198
           G   +++   +  N + ++  +G L F  +T  P Q + ID  +LT  EI +VNAYH   
Sbjct: 534 GIRLENVLIVKEANTKFNFGDKGYLAFEHITWTPYQTKLIDTTLLTPAEIEWVNAYHSDC 593

Query: 199 LDTLSPILKERGLLKDLEWLEGQCIPI 279
              L P L E    ++ EWL     PI
Sbjct: 594 RKILQPYLNE----QEKEWLRKATEPI 616


>11_05_0100 -
           19056465-19056470,19057043-19057276,19058391-19058546,
           19059639-19059763,19059912-19059983,19060080-19060184,
           19060691-19060745,19061576-19061656,19062806-19062869,
           19064715-19064782,19064947-19065033,19066121-19066285,
           19066310-19066429,19066485-19066607,19066738-19067019,
           19067936-19068075,19068234-19068335,19068802-19068874,
           19069061-19069171
          Length = 722

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 27/75 (36%), Positives = 37/75 (49%)
 Frame = +1

Query: 58  NLRGDYHGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGL 237
           N + ++  +G L F  +T  P Q + IDA +L   EI +VN YH      L P L E   
Sbjct: 573 NTKFNFGDKGYLAFEHITWAPYQTKLIDATLLAPAEIEWVNTYHSDCRRILQPYLNE--- 629

Query: 238 LKDLEWLEGQCIPIT 282
            ++ EWL     PIT
Sbjct: 630 -QEKEWLRKATEPIT 643


>02_05_0849 +
           32202610-32202880,32204234-32205711,32205993-32206143,
           32206378-32206559
          Length = 693

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -2

Query: 307 QGS*GFTSWLSGCIDLRAIPDP*ANRAPSVSDSKYQALFDGTRSRMKSRNRSESLRRYIP 128
           QG  G T W+    +  A+PDP   RA S+    +QA F   +++     R+  L + +P
Sbjct: 516 QGLSGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAK-----RNADLGKMVP 570

Query: 127 F 125
           F
Sbjct: 571 F 571


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,127,563
Number of Sequences: 37544
Number of extensions: 325314
Number of successful extensions: 672
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4166995416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)