Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F04
         (1328 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidas...    58   2e-08
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ...    52   7e-07

>AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidase p
           protein 1 protein.
          Length = 616

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = +1

Query: 91  LGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQC 270
           L F +LTLVP Q   +D  +L + EI+++N YH RVL  +   L++RG   +L+WL   C
Sbjct: 554 LTFKSLTLVPIQTSIVDKSLLIEEEINWLNQYHARVLKEVGEHLQKRGKTDELKWLAEAC 613

Query: 271 IPI 279
            PI
Sbjct: 614 KPI 616


>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
            protein Y45G5AM.2 protein.
          Length = 1061

 Score = 52.4 bits (120), Expect = 7e-07
 Identities = 22/63 (34%), Positives = 38/63 (60%)
 Frame = +1

Query: 91   LGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQC 270
            L F  LTL+P Q   ++ ++LT  EI+++N YH +V   +  IL++   +++ +WL   C
Sbjct: 999  LRFEPLTLIPIQTSIVNKDLLTSEEINWLNKYHFKVFSKIGYILRKENRMEEYDWLFNAC 1058

Query: 271  IPI 279
             PI
Sbjct: 1059 QPI 1061


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,035,278
Number of Sequences: 27780
Number of extensions: 273485
Number of successful extensions: 572
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3725590724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)