Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F03
         (1320 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39848-3|AAA80690.1|  423|Caenorhabditis elegans Hypothetical pr...   295   6e-80
AF016436-2|AAC25898.1|  406|Caenorhabditis elegans Hypothetical ...    32   0.79 
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    31   2.4  
AC024790-14|ABA61861.1|  417|Caenorhabditis elegans Hypothetical...    31   2.4  
Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical pr...    30   3.2  
U40061-4|AAA81151.3|  239|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p...    29   7.3  
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.        29   7.3  
U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of a...    29   7.3  
AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.      29   7.3  

>U39848-3|AAA80690.1|  423|Caenorhabditis elegans Hypothetical
           protein B0286.3 protein.
          Length = 423

 Score =  295 bits (723), Expect = 6e-80
 Identities = 145/273 (53%), Positives = 186/273 (68%), Gaps = 1/273 (0%)
 Frame = +1

Query: 151 KLLIEGKTKQVFDVPDQPGYCLLLNKDRITAGDGVKAHDLEGKAAISNQTNAKVFEILKS 330
           +LL EGKTKQ+FD+  +  Y L+ +KD +TA + V+ ++LEGK+ I+++T + VFE L+ 
Sbjct: 15  ELLAEGKTKQIFDIKGEKDYVLIRSKDSLTAFNAVRKNELEGKSRIASKTTSNVFEYLQL 74

Query: 331 AGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRFTPPKQETFF 510
            G+ T F K  SET F+++KC MIPIEWV RR+ATGSFLKRNPGV EGFRF   K ETFF
Sbjct: 75  LGLPTHFEKSISETEFVARKCTMIPIEWVARRVATGSFLKRNPGVKEGFRFNDLKLETFF 134

Query: 511 KDDANHDPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALIDM 690
           KDDAN DPQW++EQI+S     + L IGR+E+  M+K T L+F  LEK WAL + ALIDM
Sbjct: 135 KDDANDDPQWTDEQIVSNGLMIDHLKIGREEISLMKKMTKLVFRALEKGWALSNSALIDM 194

Query: 691 KIEFGVDTEGSIVLADVIDSDSWRLWPSGDKRLMVDKQVYRNXXXXXXXXXXXXKRNFAW 870
           KIEFGV  EG I+LADVID+DSWR+WP  D+RL +DKQVYR+             +N+  
Sbjct: 195 KIEFGVTVEGEILLADVIDNDSWRVWPENDRRLQLDKQVYRDMKEVTEEGLALVLKNYTK 254

Query: 871 VKD-QLDFLKPTIXHKVVVFMGSXADQXHCXKI 966
           V D    F K      V+V MGS +D     KI
Sbjct: 255 VMDITATFSKHQQKCHVLVIMGSGSDGVFARKI 287


>AF016436-2|AAC25898.1|  406|Caenorhabditis elegans Hypothetical
           protein F38H12.3 protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 0.79
 Identities = 21/86 (24%), Positives = 39/86 (45%)
 Frame = -3

Query: 904 SSASRNQAGLSPKQSCV*LCXDQLQSPL*GSGTPVCQPLISYHRKATISKSQNR*HPPIQ 725
           S++S + +  +  +SC  +C D +       G P C   I + R+A I+KSQ +      
Sbjct: 18  STSSMSSSPSTSSESCA-VCGDSVNGKR--YGAPACLGCIVFFRRAVINKSQYKCWKKGN 74

Query: 724 CYLLYRLRILFSCQ*VRSHAEPKLSP 647
           C + +  R +  C  +R  +   + P
Sbjct: 75  CVITFASRCVCRCCRLRKCSHVGMKP 100


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 19/73 (26%), Positives = 34/73 (46%)
 Frame = -2

Query: 800  LSTINLLSPEGHNLQESESMTSANTMLPSVSTPNSIFMSISAQSRRAQAFSKISNIRIVA 621
            LS    ++P+ +  Q        +T  P + TP++   S +A +  ++    +S  +I A
Sbjct: 3300 LSPFGKVTPKKNTAQTQSLTVLESTSSPELLTPSNPETSNTASTSSSKQPKSLSEEKITA 3359

Query: 620  FLM*STSSRPIRR 582
              M  T  RPIR+
Sbjct: 3360 TQMIQTRGRPIRK 3372


>AC024790-14|ABA61861.1|  417|Caenorhabditis elegans Hypothetical
           protein Y47D7A.16 protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 27/77 (35%), Positives = 36/77 (46%)
 Frame = -2

Query: 311 TFAFV*LEIAAFPSKSWALTPSPAVILSLLRSKQYPGWSGTSNTCLVLPSMRSLPNLYCP 132
           TF F    +A F S SW  T S  + LSLL +K   GW+        LPS   L  +   
Sbjct: 3   TFLFTFCLVAIFGSSSWIGTNSVWMELSLLTAKLPEGWN--------LPSY--LSAIVQI 52

Query: 131 TCLG*DIFAIFERQVGM 81
            CLG  I++I  + + M
Sbjct: 53  ACLGPLIYSIIHKGIKM 69


>Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical
           protein M02G9.3 protein.
          Length = 294

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -3

Query: 925 RRQLCGXSSASRNQAGLSPKQSCV*LCXDQLQSPL*GSGTPVCQ 794
           RRQ CG SS+S   +  S    C+ +C  Q QS      TP+CQ
Sbjct: 31  RRQCCGRSSSSCCSSS-SSNSYCIPVCMAQCQS---SCTTPICQ 70


>U40061-4|AAA81151.3|  239|Caenorhabditis elegans Hypothetical
           protein ZK563.5 protein.
          Length = 239

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 247 DGVKAHDLEGKAAISNQTNAKVFEILKSAGIKTAFVKIASETAFLSKKC 393
           D +  HD++   A+    NA+VF  L + GIK A    AS       +C
Sbjct: 51  DAIDKHDVDTLCAMWESWNARVFHSLDTEGIKQAQCYEASAYRLFLVRC 99


>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
            protein F43G9.6 protein.
          Length = 2034

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 397  MIPIEWVTRRLATGSFLKRNPGVPE 471
            M+P++W +R  A+ S   R+PG PE
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPE 1302


>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
          Length = 2034

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 397  MIPIEWVTRRLATGSFLKRNPGVPE 471
            M+P++W +R  A+ S   R+PG PE
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPE 1302


>U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of
           activated let-60ras protein 5 protein.
          Length = 700

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = +1

Query: 520 ANHDPQWSEEQIISAKFNYNGL-LIGRDEVDY----MRKATILIFEILEKAWALRDCALI 684
           A  +P W+    +    +  G+ ++GR +       +R  T  I+ ++EK   + DC + 
Sbjct: 544 ARLEPFWAHGDFVRVNHSTGGVEMLGRSDATLNRGGVRIGTAEIYSVVEKIPHIADCIVA 603

Query: 685 DMKIEFGVDTE 717
              +E G+D E
Sbjct: 604 GRLVEEGMDEE 614


>AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.
          Length = 700

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = +1

Query: 520 ANHDPQWSEEQIISAKFNYNGL-LIGRDEVDY----MRKATILIFEILEKAWALRDCALI 684
           A  +P W+    +    +  G+ ++GR +       +R  T  I+ ++EK   + DC + 
Sbjct: 544 ARLEPFWAHGDFVRVNHSTGGVEMLGRSDATLNRGGVRIGTAEIYSVVEKIPHIADCIVA 603

Query: 685 DMKIEFGVDTE 717
              +E G+D E
Sbjct: 604 GRLVEEGMDEE 614


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,710,470
Number of Sequences: 27780
Number of extensions: 527565
Number of successful extensions: 1190
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3694370690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)