Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E22
         (1278 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0158 - 1103461-1104186                                           70   5e-12
08_01_0202 - 1638978-1639571                                           69   6e-12
12_02_0362 + 17998110-17998345,17998877-17998958,18000309-180003...    33   0.37 
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396...    30   4.5  
09_02_0100 + 4285475-4285760,4286179-4286285                           29   7.9  
04_04_1582 - 34590698-34591199,34593849-34594690                       29   7.9  

>02_01_0158 - 1103461-1104186
          Length = 241

 Score = 69.7 bits (163), Expect = 5e-12
 Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = +2

Query: 260 GTVKWFNVKRGYGFINRNDTKEXVFVHQXAIARNNPRKAVRSVGDGEAVEFAVVAGEKG- 436
           GTVKWFN  +G+GFI+ +D  E +FVHQ +I  +      RS+ +GE VEFA+   E G 
Sbjct: 9   GTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKAD----GFRSLAEGEQVEFAISESEDGR 64

Query: 437 FEAAGVTGPGGEPVKG 484
            +A  VTGP G  VKG
Sbjct: 65  TKAVDVTGPDGSFVKG 80


>08_01_0202 - 1638978-1639571
          Length = 197

 Score = 69.3 bits (162), Expect = 6e-12
 Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
 Frame = +2

Query: 245 AEXVSGTVKWFNVKRGYGFINRNDTKEXVFVHQXAIARNNPRKAVRSVGDGEAVEFAVVA 424
           +E V GTVKWF+  +G+GFI  +D  E +FVHQ ++  +      RS+ DG+ VEF+V +
Sbjct: 3   SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSD----GYRSLNDGDVVEFSVGS 58

Query: 425 GEKG-FEAAGVTGPGGEPVK-GSPYAADKRRGY 517
           G  G  +A  VT PGG  +  GS  +    RGY
Sbjct: 59  GNDGRTKAVDVTAPGGGALTGGSRPSGGGDRGY 91


>12_02_0362 +
           17998110-17998345,17998877-17998958,18000309-18000392,
           18000600-18000734,18001395-18001570,18001654-18001805,
           18003730-18004575,18004961-18005301
          Length = 683

 Score = 33.5 bits (73), Expect = 0.37
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 133 GERRWWQRWEKTPRPXLDVHRFEXEXNGQNAEDEXRPXVGGE 8
           GE+ WWQ ++ TPR   +V     E   QN   + +P  G E
Sbjct: 272 GEKVWWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPSHGNE 313


>03_06_0157 -
           32039020-32039175,32039267-32039338,32039478-32039602,
           32039678-32040559,32040623-32040692,32041248-32041739,
           32041985-32042044,32042541-32042618,32043322-32044344
          Length = 985

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 395 GEAVEFAVVAGEKGFEAAGVTGPGGEPVKG 484
           GE+ E  ++ GE   E   V GPGGEP  G
Sbjct: 388 GESKEDEIIEGEPDPEMEVVAGPGGEPKVG 417


>09_02_0100 + 4285475-4285760,4286179-4286285
          Length = 130

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -3

Query: 142 GGIGERRWWQRWEKTPRPXLDVHRFEXEXNGQNAEDEXRP 23
           G  G RRWW  W + PR   D    E +   + A     P
Sbjct: 82  GSRGRRRWW--WRRVPRDDEDAQMVESDDEDKQAPTSSIP 119


>04_04_1582 - 34590698-34591199,34593849-34594690
          Length = 447

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 389 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 511
           GDG   E +   G+KG    G  G GG   KGS  ++++ R
Sbjct: 229 GDGGVEEGSAGGGKKGGGGGGGGGGGGHGEKGSAKSSEQER 269


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,014,748
Number of Sequences: 37544
Number of extensions: 442772
Number of successful extensions: 1604
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)