Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_E21
(1281 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.44
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.44
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.44
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 1.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.3
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.3
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.3
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.3
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 2.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 2.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 2.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 3.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.4
AC006761-1|ABG56132.1| 71|Caenorhabditis elegans Hypothetical ... 29 5.4
U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical pr... 29 7.1
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 7.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 7.1
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 9.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 9.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.44
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = -2
Query: 824 GGPPPPXXXXXXXXXXXXXXFXXSPPPPXXXFXPFW---PPFXXIXXXXXXXXXXGRXXP 654
GGPPPP PPPP P PP P
Sbjct: 711 GGPPPPPGLPPITGGPP-------PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 653 PXGGXKPXPPPXPP 612
P GG P PPP PP
Sbjct: 764 PPGGCPPPPPPPPP 777
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -3
Query: 682 PPFFXGXXPPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPPXXGXF 533
PP G PP PPP P P F G PP PP G F
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPPGMF 793
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = -2
Query: 824 GGPPPPXXXXXXXXXXXXXXFXXSPPPPXXXFXPF--WPPFXXIXXXXXXXXXXGRXXPP 651
GGPPPP PPPP P PP PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPP----PPPPPGGLPPISGGPP---PPPPPPGGCPPPPPPPP 776
Query: 650 XGGXKPXPPPXPP 612
GG K PPP PP
Sbjct: 777 PGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -3
Query: 682 PPFFXGXXPPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPPXXG 539
PP G PP GG PPP P GG P PP PP G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPI-----SGGPP---PPPPPPGG 767
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = -3
Query: 682 PPFFXGXXPPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPP 548
PP G PP GG PPP P P GG P PP PP
Sbjct: 744 PPPPPGGLPPISGG----PPPPPPPP-------GGCPPPPPPPPP 777
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 540 PXXGGXGGLXXGXPPPPXXKKXGXXGXGGGXXFXPPXXGGXXP 668
P GG + G PPPP G GG PP GG P
Sbjct: 730 PPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPPPPPGGCPP 770
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.44
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = -2
Query: 824 GGPPPPXXXXXXXXXXXXXXFXXSPPPPXXXFXPFW---PPFXXIXXXXXXXXXXGRXXP 654
GGPPPP PPPP P PP P
Sbjct: 711 GGPPPPPGLPPITGGPP-------PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 653 PXGGXKPXPPPXPP 612
P GG P PPP PP
Sbjct: 764 PPGGCPPPPPPPPP 777
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -3
Query: 682 PPFFXGXXPPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPPXXGXF 533
PP G PP PPP P P F G PP PP G F
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPPGMF 793
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = -2
Query: 824 GGPPPPXXXXXXXXXXXXXXFXXSPPPPXXXFXPF--WPPFXXIXXXXXXXXXXGRXXPP 651
GGPPPP PPPP P PP PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPP----PPPPPGGLPPISGGPP---PPPPPPGGCPPPPPPPP 776
Query: 650 XGGXKPXPPPXPP 612
GG K PPP PP
Sbjct: 777 PGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -3
Query: 682 PPFFXGXXPPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPPXXG 539
PP G PP GG PPP P GG P PP PP G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPI-----SGGPP---PPPPPPGG 767
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = -3
Query: 682 PPFFXGXXPPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPP 548
PP G PP GG PPP P P GG P PP PP
Sbjct: 744 PPPPPGGLPPISGG----PPPPPPPP-------GGCPPPPPPPPP 777
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 540 PXXGGXGGLXXGXPPPPXXKKXGXXGXGGGXXFXPPXXGGXXP 668
P GG + G PPPP G GG PP GG P
Sbjct: 730 PPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPPPPPGGCPP 770
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.44
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = -2
Query: 824 GGPPPPXXXXXXXXXXXXXXFXXSPPPPXXXFXPFW---PPFXXIXXXXXXXXXXGRXXP 654
GGPPPP PPPP P PP P
Sbjct: 294 GGPPPPPGLPPITGGPP-------PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Query: 653 PXGGXKPXPPPXPP 612
P GG P PPP PP
Sbjct: 347 PPGGCPPPPPPPPP 360
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -3
Query: 682 PPFFXGXXPPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPPXXGXF 533
PP G PP PPP P P F G PP PP G F
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPPGMF 376
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = -2
Query: 824 GGPPPPXXXXXXXXXXXXXXFXXSPPPPXXXFXPF--WPPFXXIXXXXXXXXXXGRXXPP 651
GGPPPP PPPP P PP PP
Sbjct: 307 GGPPPPPPPGGLPPITGGPP----PPPPPGGLPPISGGPP---PPPPPPGGCPPPPPPPP 359
Query: 650 XGGXKPXPPPXPP 612
GG K PPP PP
Sbjct: 360 PGGFKGGPPPPPP 372
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -3
Query: 682 PPFFXGXXPPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPPXXG 539
PP G PP GG PPP P GG P PP PP G
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPI-----SGGPP---PPPPPPGG 350
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = -3
Query: 682 PPFFXGXXPPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPP 548
PP G PP GG PPP P P GG P PP PP
Sbjct: 327 PPPPPGGLPPISGG----PPPPPPPP-------GGCPPPPPPPPP 360
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 540 PXXGGXGGLXXGXPPPPXXKKXGXXGXGGGXXFXPPXXGGXXP 668
P GG + G PPPP G GG PP GG P
Sbjct: 313 PPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPPPPPGGCPP 353
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 547 RGXXGVYXXGPPPPPXXKXPGXGGX--GGGXGFXPPXGG 657
+G G GPPPP PG G GG GF PP G
Sbjct: 401 QGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPG 439
Score = 30.7 bits (66), Expect = 2.3
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = -3
Query: 754 PPPPXFXFFXXFGPLFXKFFXX-FSPP---FFXGXXPPXXGGKNXXPPPXPXXPXFFXXG 587
PPPP F P F+PP F P GG PP P P +
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 586 GGGXPXYKPPXPPXXGXF 533
GG + PP P G +
Sbjct: 427 QGGPGGFGPPPPGGPGAY 444
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 577 PPPPPXXKXPGXGGXGGGXGFXPPXGG 657
PPPPP G GG GGG G GG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGG 137
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 577 PPPPPXXKXPGXGGXGGGXG 636
PPPPP G GG GGG G
Sbjct: 54 PPPPPPACGGGCGGGGGGCG 73
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 549 GGXGGLXXG-XPPPPXXKKXGXXGXGGG 629
GG GG G PPPP G G GGG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGG 70
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 549 GGXGGLXXG-XPPPPXXKKXGXXGXGGG 629
GG GG G PPPP G G GGG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGG 127
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 574 GPPPPPXXKXPGXGGXGGGXGFXPP 648
G PPPP + P G GGG G PP
Sbjct: 788 GAPPPPGMRPP-PGAPGGGGGMYPP 811
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 574 GPPPPPXXKXPGXGGXGGGXGFXPP 648
G PPPP + P G GGG G PP
Sbjct: 788 GAPPPPGMRPP-PGAPGGGGGMYPP 811
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 574 GPPPPPXXKXPGXGGXGGGXGFXPP 648
G PPPP + P G GGG G PP
Sbjct: 788 GAPPPPGMRPP-PGAPGGGGGMYPP 811
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 574 GPPPPPXXKXPGXGGXGGGXGFXPP 648
G PPPP + P G GGG G PP
Sbjct: 788 GAPPPPGMRPP-PGAPGGGGGMYPP 811
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 541 PXRGXXGVYXXGPPPPPXXKXPGXGGXGGGXGFXPP 648
P G G PPPPP G GG GGG PP
Sbjct: 20 PSGGGGGCGCAPPPPPPAC---GCGGGGGGYAAPPP 52
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 549 GGXGGLXXGXPPPPXXKKXGXXGXGGGXXFXPP 647
GG GG PPPP G G GGG PP
Sbjct: 22 GGGGGCGCAPPPPPPA--CGCGGGGGGYAAPPP 52
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 2.3
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Frame = -2
Query: 824 GGPPPPXXXXXXXXXXXXXXFXXSPPPPXXXFXPFWPPFXXIXXXXXXXXXXGRXXPPXG 645
G PPPP PPPP P PP R PP
Sbjct: 166 GSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPK 225
Query: 644 GX-KPXPPP 621
G P PPP
Sbjct: 226 GTGSPTPPP 234
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Frame = -2
Query: 824 GGPPPPXXXXXXXXXXXXXXFXXSPPPPXXXFXPFWPPFXXIXXXXXXXXXXGRXXPPXG 645
G PPPP PPPP P PP R PP
Sbjct: 104 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPK 163
Query: 644 GX-KPXPPP 621
G P PPP
Sbjct: 164 GTGSPPPPP 172
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.7 bits (66), Expect = 2.3
Identities = 22/78 (28%), Positives = 23/78 (29%)
Frame = +3
Query: 522 FSKKKXPXXGGXGGLXXGXPPPPXXKKXGXXGXGGGXXFXPPXXGGXXPXXXXXXXXXXN 701
F K P G G PPPP + G G F PP GG
Sbjct: 737 FDPNKPPPPMFQQGFNAGAPPPPFGR-----GAGPMSSFPPPPRGGMHHMPPPPSFRGGR 791
Query: 702 XXKRGPKXXKXXXXGGGG 755
GP GGGG
Sbjct: 792 GGHGGPPPPHFDRRGGGG 809
Score = 29.1 bits (62), Expect = 7.1
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Frame = -3
Query: 754 PPPPXFXFFXXFGPLFXKFFXXFSPPFFXGXXPPXXGGKNXXPPP-----------XPXX 608
PPPP F G F P PP GG + PPP P
Sbjct: 742 PPPPMFQQGFNAGAPPPPFGRGAGP--MSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPP 799
Query: 607 PXFFXXGGGGXPXYKP 560
P F GGGG P ++P
Sbjct: 800 PHFDRRGGGG-PPFRP 814
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = -3
Query: 688 FSPPFFXGXXPPXXGG---KNXXPPPXPXXPXFFXXGGGGXPXYKPPXPP 548
F PP G PP G PPP P P + G G P P PP
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPP--PRYPSAGPGMYPPPPPSRPP 382
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 658 PPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPP 548
PP PPP P P G G P PP PP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGR-TPGPPGMPGMPPPPPP 332
Score = 26.6 bits (56), Expect(2) = 2.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 577 PPPPPXXKXPGXGGXGGGXGFXPP 648
PPPPP + PG G G PP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPP 332
Score = 22.2 bits (45), Expect(2) = 2.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 550 GXXGVYXXGPPPPP 591
G G Y PPPPP
Sbjct: 265 GYQGQYPPVPPPPP 278
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = -3
Query: 688 FSPPFFXGXXPPXXGG---KNXXPPPXPXXPXFFXXGGGGXPXYKPPXPP 548
F PP G PP G PPP P P + G G P P PP
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPP--PRYPSAGPGMYPPPPPSRPP 372
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 658 PPXXGGKNXXPPPXPXXPXFFXXGGGGXPXYKPPXPP 548
PP PPP P P G G P PP PP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGR-TPGPPGMPGMPPPPPP 322
Score = 26.6 bits (56), Expect(2) = 2.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 577 PPPPPXXKXPGXGGXGGGXGFXPP 648
PPPPP + PG G G PP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPP 322
Score = 22.2 bits (45), Expect(2) = 2.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 550 GXXGVYXXGPPPPP 591
G G Y PPPPP
Sbjct: 255 GYQGQYPPVPPPPP 268
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 8/45 (17%)
Frame = -3
Query: 658 PPXXGGKNXXPPPXPXXPXFFXXGG--------GGXPXYKPPXPP 548
PP G N PPP P P G GG P PP PP
Sbjct: 541 PPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPP 585
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 628 PPPXPXXPXFFXXGGGGXPXYKPPXPP 548
PPP P P G G P PP PP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 628 PPPXPXXPXFFXXGGGGXPXYKPPXPP 548
PPP P P G G P PP PP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 656 PPXGGXKPXPPPXPPXP 606
PP G P PPP PP P
Sbjct: 240 PPVGAGAPPPPPPPPPP 256
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 665 RXXPPXGGXKPXPPPXPPXPXXXXXXXXXGPXX*TPXXPRXG 540
R PP G P PPP P P +P PR G
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 270
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 665 RXXPPXGGXKPXPPPXPPXPXXXXXXXXXGPXX*TPXXPRXG 540
R PP G P PPP P P +P PR G
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 291
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 665 RXXPPXGGXKPXPPPXPPXPXXXXXXXXXGPXX*TPXXPRXG 540
R PP G P PPP P P +P PR G
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 276
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 656 PPXGGXKPXPPPXPPXP 606
PP G P PPP PP P
Sbjct: 226 PPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 656 PPXGGXKPXPPPXPPXP 606
PP G P PPP PP P
Sbjct: 226 PPVGAGAPPPPPPPPPP 242
>AC006761-1|ABG56132.1| 71|Caenorhabditis elegans Hypothetical
protein Y41G9A.10 protein.
Length = 71
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 547 RGXXGVYXXGPPPPPXXKXPGXGGXGGGXGFXPPXGGXXRP 669
RG G PP G GG G G+ P GG RP
Sbjct: 27 RGSYGAPSNYSPPESQYGHNGGGGYGRPSGYGQPGGGYGRP 67
>U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical
protein M03E7.2 protein.
Length = 122
Score = 29.1 bits (62), Expect = 7.1
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Frame = +1
Query: 550 GXXGVYXXGPPP--PPXXKXPGXGGXGG--GXGFXPPXGG 657
G G+Y PPP PP G GG GG G P GG
Sbjct: 48 GMNGMYGGMPPPMPPPGMSPYGMGGMGGMSPYGMMGPMGG 87
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 577 PPPPPXXKXPGXGGXGGGXGFXPPXGG 657
PPPPP P GGG G+ P GG
Sbjct: 63 PPPPPPPPAP----IGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 577 PPPPPXXKXPGXGGXGGGXGFXPPXGG 657
PPPPP P GGG G+ P GG
Sbjct: 63 PPPPPPPPAP----IGGGAGYAAPFGG 85
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 9.4
Identities = 24/74 (32%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Frame = -3
Query: 748 PPXFXFFXX-----FGPLFXKFFXXFSPPFFXGXXPPXXGG--KNXXPPPXPXXPXFFXX 590
PP F FF F P F PP F P G + PPP P
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHP-----MMF 344
Query: 589 GGGGXPXYKPPXPP 548
GG P + PP PP
Sbjct: 345 RGGPYPPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 9.4
Identities = 24/74 (32%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Frame = -3
Query: 748 PPXFXFFXX-----FGPLFXKFFXXFSPPFFXGXXPPXXGG--KNXXPPPXPXXPXFFXX 590
PP F FF F P F PP F P G + PPP P
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHP-----MMF 344
Query: 589 GGGGXPXYKPPXPP 548
GG P + PP PP
Sbjct: 345 RGGPYPPFFPPPPP 358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,027,727
Number of Sequences: 27780
Number of extensions: 376041
Number of successful extensions: 1839
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3579019094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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