Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_E20
(1322 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.013
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.12
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.15
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.62
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.82
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 25 2.5
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.5
SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 28 3.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.4
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 27 7.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.013
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = -2
Query: 790 PPXXGXXXXXXPPXFPXKXXFXPPXXGGXPPPPXXFFXXGAPXPPPXGXPPPP 632
PP P P P GG PPPP GA PPP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP--PPPPP 783
Score = 32.7 bits (71), Expect = 0.12
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Frame = -2
Query: 757 PPXFPXKXXFXPPXXGGXPPPPXXFFXXGAPXPPP------XGXPPPPXP 626
PP P P P PP G P PPP G PPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/78 (28%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Frame = -2
Query: 862 NPPPPPPXXXKKKXXXXXXXXXXXPPXXGXXXXXXPPXFPXKXXFXPPXXGGXPPPPXXF 683
+PPPPPP P G PP P PP PPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP--PGVAGAGPPP---PPPPPPAV 785
Query: 682 FXXGAP--XPPPXGXPPP 635
G+ P P P P
Sbjct: 786 SAGGSRYYAPAPQAEPEP 803
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 902 PXPPXGXXXXXXXXPPPPPP 843
P PP G PPPPPP
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 902 PXPPXGXXXXXXXXPPPPPPP 840
P PP PPPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 902 PXPPXGXXXXXXXXPPPPPPP 840
P PP PPPPPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 902 PXPPXGXXXXXXXXPPPPPPP 840
P PP PPPPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.12
Identities = 24/75 (32%), Positives = 24/75 (32%)
Frame = +2
Query: 635 GGGXPXXGGXXGPXXKKXXGGXGXPPXXRGGKXGFXGEXGGXXGXXGXXXXGXXXXXXXX 814
G G G GP GG G GG GF G GG G G G
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 815 XXXFFFXXXGGGGGG 859
F GG GGG
Sbjct: 252 GG--FGGGPGGFGGG 264
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.15
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = -2
Query: 853 PPPPXXXKKKXXXXXXXXXXXPPXXGXXXXXXPPXFPXKXXFXPPXXGGXPPPPXXFFXX 674
PP P PP PP P PP G P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP-LPPSAPIAPPLPAGMPAAPP--LPP 471
Query: 673 GAPXPPPXGXPPPPXP 626
AP PPP P P P
Sbjct: 472 AAPAPPPAPAPAPAAP 487
Score = 31.5 bits (68), Expect = 0.27
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = -3
Query: 861 TPPPPPPXXXKKXXXXXXXXXXXXPXXXXPXXPXXPPXSPXXPFXPPLXXGGXPXPPXFF 682
T PP P P P PP P P PPL G PP
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP--L 469
Query: 681 XXXGPXXPPXXGXPP 637
P PP P
Sbjct: 470 PPAAPAPPPAPAPAP 484
Score = 30.7 bits (66), Expect = 0.47
Identities = 25/118 (21%), Positives = 26/118 (22%)
Frame = -2
Query: 979 PXXPPXXXXXXXXXXGXXXGXPKXXPPXPXGGXXXXXXXNPPPPPPXXXKKKXXXXXXXX 800
P PP P+ P P PPP
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 799 XXXPPXXGXXXXXXPPXFPXKXXFXPPXXGGXPPPPXXFFXXGAPXPPPXGXPPPPXP 626
PP PP P PPPP P PP PPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPP---PPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 896 PPXGXXXXXXXXPPPPPPP 840
PP G PPPPPPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPP 343
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = -2
Query: 862 NPPPPPPXXXKKKXXXXXXXXXXXPPXXGXXXXXXPPXFPXKXXFXPPXXGGXPPPPXXF 683
NPP PPP + PP PP P P PP
Sbjct: 387 NPPAPPPAIPGRSAPAL-------PPLGNASRTSTPPV-PTPPSLPPSAPPSLPPSAPPS 438
Query: 682 FXXGAPXPPPXGXPPPPXP 626
GAP PP P P
Sbjct: 439 LPMGAPAAPPLPPSAPIAP 457
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.62
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 902 PXPPXGXXXXXXXXPPPPPPPXXXKK 825
P PP PPPPPPP KK
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 724 PPXXGGXPPPPXXFFXXGAPXPPP 653
PP PPPP F P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 916 PKXXPPXPXGGXXXXXXXNPPPPPPXXXKKK 824
P PP P PPPPPP KK+
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGYVKKR 36
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 904 PPXPXGGXXXXXXXNPPPPPPXXXKKK 824
PP P G PPPPP K+K
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKKRK 37
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.82
Identities = 25/101 (24%), Positives = 25/101 (24%), Gaps = 4/101 (3%)
Frame = -2
Query: 916 PKXXPPXPXGGXXXXXXXNPPPPP----PXXXKKKXXXXXXXXXXXPPXXGXXXXXXPPX 749
P PP P P P P P PP P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 748 FPXKXXFXPPXXGGXPPPPXXFFXXGAPXPPPXGXPPPPXP 626
P P G PP P P P P G PP P P
Sbjct: 1106 KPSVAVPPVPAPSGAPPVPKPSVA-APPVPVPSGAPPVPKP 1145
Score = 29.9 bits (64), Expect = 0.82
Identities = 27/108 (25%), Positives = 27/108 (25%), Gaps = 9/108 (8%)
Frame = -2
Query: 922 GXPKXXPPXPXGGXXXXXXXNPPPPPPXXXKKKXXXXXXXXXXXPPXXGXXXXXXP---- 755
G P PP P P PP PP P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Query: 754 ---PXFPXKXXFXPPXX--GGXPPPPXXFFXXGAPXPPPXGXPPPPXP 626
P P PP G PP P P P P G PP P P
Sbjct: 1118 SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVA-APPVPAPSGAPPVPKP 1164
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 724 PPXXGGXPPPPXXFFXXGAPXPPPXGXPPPPXP 626
P G PP P P PPP PP P P
Sbjct: 1172 PAPSSGIPPVPKPAAGV-PPVPPPSEAPPVPKP 1203
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 860 PPPPPPPXXXKK 825
PPPPPPP +K
Sbjct: 1096 PPPPPPPAEVEK 1107
Score = 21.4 bits (43), Expect(2) = 2.5
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = -1
Query: 902 PXPPXGXXXXXXXXPPPPPPP 840
P P PPPPPP
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPP 1100
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 2.5
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +2
Query: 638 GGXPXXGGXXGPXXKKXXGGXGXPPXXRGGKXGFXGEXGGXXGXXGXXXXG 790
GG GG G GG G RGG+ G G GG G G G
Sbjct: 23 GGRGGFGGGRG---GARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 627 GXGGG-GXPXGGGXGAPXXKKXXGGGGXPPXKGGXKXXXXGKXGGXXXXXXP 779
G GGG G GGG G + G GG +GG G GG P
Sbjct: 27 GFGGGRGGARGGGRGGARGGRG-GRGGARGGRGGSSGGRGGAKGGAKVIIEP 77
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +3
Query: 627 GXGGGGXPXGGGXGAPXXKKXXGGGGXPPXKGGXKXXXXGKXGG 758
G GG GGG G G G +GG + G GG
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 26.6 bits (56), Expect = 7.7
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 635 GGGXPXXGGXXGPXXKKXXGGXGXPPXXRGGKXGFXGEXGGXXGXXGXXXXG 790
GG GG G G G RGG G G GG G G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 767
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 345 FYLIQKFLQFSSNNNFTVFYNQLY 274
FYL+ F QFSS+NN + +L+
Sbjct: 287 FYLLMTFWQFSSDNNHFYYNTKLF 310
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/75 (24%), Positives = 18/75 (24%)
Frame = -2
Query: 859 PPPPPPXXXKKKXXXXXXXXXXXPPXXGXXXXXXPPXFPXKXXFXPPXXGGXPPPPXXFF 680
PPP P PP PP P PP PPPP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQA 209
Query: 679 XXGAPXPPPXGXPPP 635
P PP
Sbjct: 210 PVANTSSRPSSFAPP 224
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 303 YY*KKIVKISELNKISKKYLPKPIRHLIKYNVEFSIK 413
+Y + ++++S L ++ KY P+ RHLI+ +F K
Sbjct: 167 FYNQCVMEVSILELLNNKYDPEDKRHLIRLYDQFMHK 203
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,405,289
Number of Sequences: 5004
Number of extensions: 58426
Number of successful extensions: 403
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 725319970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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