Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E20
         (1322 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    29   0.068
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    24   3.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   3.4  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   4.5  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   7.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   7.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   7.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   7.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   7.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   7.8  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 29.5 bits (63), Expect = 0.068
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -2

Query: 445 TCILNLSYIYNLIENSTLYFIRCLIGLGKYFLLILF 338
           TC L+L+  Y ++ +S  +++ C++ LG Y  L  +
Sbjct: 183 TCALDLTPTYAVVSSSISFYVPCIVMLGIYCRLYCY 218


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 85  GEKLSAMSHQFRIEMSMGXHTTVLD 159
           G ++    H+ R+  ++G HT VLD
Sbjct: 278 GGQIKPRKHEQRLLRNVGVHTVVLD 302


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 860  PPPPPPP 840
            PPPPPPP
Sbjct: 1355 PPPPPPP 1361



 Score = 23.8 bits (49), Expect = 3.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 860  PPPPPPP 840
            PPPPPPP
Sbjct: 1356 PPPPPPP 1362


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 162 INSSTSVTFHHNISTPKVAVSIKQKI 239
           + +  SV FHH+ + P  ++  +QK+
Sbjct: 112 LTNRKSVVFHHDNARPHTSLVTRQKL 137


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 309 NNNFTVFYNQLY*FYILKMSRI 244
           NNN+   Y +LY  YI+ + +I
Sbjct: 106 NNNYNNNYKKLYKNYIINIEQI 127


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 309 NNNFTVFYNQLY*FYILKMSRI 244
           NNN+   Y +LY  YI+ + +I
Sbjct: 106 NNNYNNNYKKLYKNYIINIEQI 127


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 162 CVQDCSMXSHTHLNSKL 112
           CV DC +   T+L S+L
Sbjct: 343 CVMDCKVGVRTYLESEL 359


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 162 CVQDCSMXSHTHLNSKL 112
           CV DC +   T+L S+L
Sbjct: 258 CVMDCKVGVRTYLESEL 274


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 162 CVQDCSMXSHTHLNSKL 112
           CV DC +   T+L S+L
Sbjct: 577 CVMDCKVGVRTYLESEL 593


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -2

Query: 673 GAPXPPPXGXPPPPXP 626
           G   PP  G P PP P
Sbjct: 406 GGQLPPSAGAPMPPIP 421


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,157
Number of Sequences: 438
Number of extensions: 9619
Number of successful extensions: 39
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 45623940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)