Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E16
         (1379 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0080 + 644021-645463                                             30   4.9  
04_04_0961 + 29715938-29716034,29716918-29717133,29717438-297177...    29   6.5  
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477...    29   8.6  
05_02_0052 + 6124880-6124956,6125097-6125250,6125327-6125920,612...    29   8.6  

>06_01_0080 + 644021-645463
          Length = 480

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +2

Query: 446 MTEVGKSGSLRDIKVVHMHTEKDAAYVTPECKDIFRSVSLFMAANVRKSVAEGRSDAIPI 625
           +T +GK GS   +K+VH   E     +  E  D+ +SV     + +++  +E     +  
Sbjct: 173 VTYIGKGGSGNFVKMVHNGIEYGDMQLISEAYDVLKSVGKLTNSELQQVFSEWNKGELLS 232

Query: 626 FLQDI 640
           FL +I
Sbjct: 233 FLIEI 237


>04_04_0961 +
           29715938-29716034,29716918-29717133,29717438-29717776,
           29718247-29719274,29719465-29719551,29719636-29720043,
           29720394-29720558,29720742-29721036,29721131-29721345,
           29721838-29722143,29722474-29722537,29722644-29722883,
           29722959-29723062
          Length = 1187

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/70 (24%), Positives = 33/70 (47%)
 Frame = +2

Query: 440 NAMTEVGKSGSLRDIKVVHMHTEKDAAYVTPECKDIFRSVSLFMAANVRKSVAEGRSDAI 619
           +A+ E+ ++ +  DI++ H     +    +P  KD+   V   M   +   V  G+S  +
Sbjct: 381 DAVIEIPRNDTEYDIEIDHGIFSWELETTSPTLKDVELKVKRGMKVAICGMVGSGKSSLL 440

Query: 620 PIFLQDIPKL 649
              L ++PKL
Sbjct: 441 SSILGEMPKL 450


>07_03_1291 +
           25545749-25546262,25546989-25547669,25547693-25547751,
           25549152-25549242,25549330-25549743,25550191-25550243,
           25550947-25551177,25551492-25551708,25551790-25551890,
           25552446-25552532,25553536-25553676,25553839-25553961,
           25554070-25554522,25554931-25555308,25555410-25556060,
           25556264-25556368,25556482-25556707,25557204-25557241
          Length = 1520

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = -3

Query: 522 YAASFSVCIWTTLMSRNDPLF---PTSVMA-LRRGTGVAAAPWANTVSPDLR 379
           + + F +C+WT    R+D +F   P S+ A L+RG   +   WA   +PD R
Sbjct: 341 FQSFFLLCLWTLWNHRHDVVFRERPPSISACLQRGLSESTL-WAAMFTPDDR 391


>05_02_0052 +
           6124880-6124956,6125097-6125250,6125327-6125920,
           6126344-6126757,6126835-6126846
          Length = 416

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = -3

Query: 603 PSATDLRTFAAINNDTDLNMSLHSGVTYAASFSVCIWTTLMSRNDPLFPTSVMALRRGTG 424
           PS++  R+F+A    T  +   +S +  AA+ + C   T    +  L P    A RR +G
Sbjct: 97  PSSSSFRSFSAGTTTTTTSRDDNSSLMLAAAAASCHHQTTEVSSQILLPRPGQAARRSSG 156

Query: 423 VAAAPWANT 397
              A  A T
Sbjct: 157 GHGAAAAAT 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,864,262
Number of Sequences: 37544
Number of extensions: 602801
Number of successful extensions: 1900
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1900
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4364869500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)