Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E16
         (1379 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028606-1|AAH28606.1|  261|Homo sapiens LOC202134 protein protein.    34   1.4  
AF155097-1|AAD42863.1|  310|Homo sapiens NY-REN-7 antigen protein.     33   3.2  
AB018295-1|BAA34472.1|  334|Homo sapiens KIAA0752 protein protein.     33   3.2  
AF253321-1|AAF64523.1|  716|Homo sapiens cervical mucin MUC5B pr...    32   4.3  
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            32   5.6  
X74370-1|CAA52408.1|  543|Homo sapiens mucin protein.                  32   5.6  

>BC028606-1|AAH28606.1|  261|Homo sapiens LOC202134 protein protein.
          Length = 261

 Score = 33.9 bits (74), Expect = 1.4
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +2

Query: 797 NMPRTFGDAIIHVSHIDYAVEDNAPLP---EHGVGKAASAEETEIGRLXGE 940
           ++P     +++ V+H D  ++ N  L    EHG G+  S E TE+  + G+
Sbjct: 88  HLPEASNQSLLTVAHADTGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGD 138


>AF155097-1|AAD42863.1|  310|Homo sapiens NY-REN-7 antigen protein.
          Length = 310

 Score = 32.7 bits (71), Expect = 3.2
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 797 NMPRTFGDAIIHVSHIDYAVEDNAPLP---EHGVGKAASAEETEIGRLXGE 940
           ++P     +++ V+H D   + N  L    EHG G+  S E TE+  + G+
Sbjct: 88  HLPEASNQSLLTVAHADAGTQTNGDLEDLEEHGPGQTVSEEATEVHMMEGD 138


>AB018295-1|BAA34472.1|  334|Homo sapiens KIAA0752 protein protein.
          Length = 334

 Score = 32.7 bits (71), Expect = 3.2
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 797 NMPRTFGDAIIHVSHIDYAVEDNAPLP---EHGVGKAASAEETEIGRLXGE 940
           ++P     +++ V+H D   + N  L    EHG G+  S E TE+  + G+
Sbjct: 112 HLPEASNQSLLTVAHADAGTQTNGDLEDLEEHGPGQTVSEEATEVHMMEGD 162


>AF253321-1|AAF64523.1|  716|Homo sapiens cervical mucin MUC5B
            protein.
          Length = 716

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 30/114 (26%), Positives = 47/114 (41%)
 Frame = -3

Query: 1026 VLGSFRADSTASGMLPIPXCSVAPSSTRFSPISRPISVSSALAAFPTPCSGRGALSSTA* 847
            VL S    STA+ + PIP  ++  + T     + P++  S +    TP +   +   T  
Sbjct: 401  VLTSTATKSTATSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTT- 459

Query: 846  SMCDTCIIASPNVRGMFTFT*AMMILELTNAALTQSTEVPRLQ*PWLSGGETWI 685
                T   +S +       T   ++ ELT AA T +   P    P  + G TWI
Sbjct: 460  EATTTRATSSTSTPSSTPGT-TCILTELTTAATTTAATGPTAM-PSSTPGTTWI 511


>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
 Frame = -3

Query: 1026 VLGSFRADSTASGMLPIPXCSVAPSSTRFSPISRPISVSSALAAFPTP-CSGRGALSSTA 850
            VL S    STA+ + PIP  ++  + T     + P++  S +    TP  +    + +T 
Sbjct: 2927 VLTSTATKSTATSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTK 2986

Query: 849  *SMCDTCIIASPNVRGMFTFT*AMMILELTNAALTQSTEVPRLQ*PWLSGGETWI 685
             +   T   ++P+     T+    ++ ELT AA T +   P    P  + G TWI
Sbjct: 2987 ATTRATSSTSTPSSTPGTTW----ILTELTTAATTTAGTGPTAT-PSSTPGTTWI 3036


>X74370-1|CAA52408.1|  543|Homo sapiens mucin protein.
          Length = 543

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
 Frame = -3

Query: 1026 VLGSFRADSTASGMLPIPXCSVAPSSTRFSPISRPISVSSALAAFPTPCSGRGA--LSST 853
            VL S    STA+ + PIP  ++  + T     + P++  S +    TP +   +  L++ 
Sbjct: 92   VLTSTATKSTATSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTK 151

Query: 852  A*SMCDTCIIASPNVRGMFTFT*AMMILELTNAALTQSTEVPRLQ*PWLSGGETWI 685
            A +   T   ++P+     T+    ++ ELT AA T +   P    P  + G TWI
Sbjct: 152  ATTTRATSSTSTPSSTPGTTW----ILTELTTAATTTAGTGPTAT-PSSTPGTTWI 202


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,352,548
Number of Sequences: 237096
Number of extensions: 3175578
Number of successful extensions: 10750
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10749
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20060143044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)