Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E15
         (1290 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177...    31   1.5  
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482...    31   1.5  
05_03_0382 + 13342764-13342958,13343178-13343278,13343373-133434...    30   3.4  
06_03_1310 + 29238644-29240260                                         30   4.6  

>09_04_0736 -
           19815427-19815642,19815782-19816903,19817006-19817707,
           19817808-19817855,19817959-19818201,19819035-19819391
          Length = 895

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 22/62 (35%), Positives = 29/62 (46%)
 Frame = +3

Query: 576 SDEIVKDTLYREYKKYGDFSIKISHELDERVAYICFRSAEDARDAKHAKPRIILYDKVAI 755
           S  I K+ L  E+KK+G     I+   D+  AYI F   EDA  A  A    +L  +   
Sbjct: 132 SSSISKEELEEEFKKFGKVD-GIAFSRDQTSAYIDFDKLEDAISAHRALNGRVLGGQELC 190

Query: 756 VD 761
           VD
Sbjct: 191 VD 192


>05_01_0550 +
           4820086-4821255,4822112-4822321,4822429-4822524,
           4822610-4822828,4823201-4823395,4823466-4823612,
           4823712-4823861,4825015-4825145,4825234-4825477
          Length = 853

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = +3

Query: 639 KISHELDERVAYICFRSAEDARDAKHAKPRIILYD---KVAIVDPVYEPVRSEYRPRPRS 809
           K+  E  E   ++  +  +     KHA P +++ D   K   +D    P+ S+ +P P+ 
Sbjct: 729 KVLDECSEAEIWLIEKQQQQDALPKHADPVLLISDMKKKAEALDRSCRPIMSKPKPAPKP 788

Query: 810 ITPPDYDRPYSYAWSP 857
            TPP    P     +P
Sbjct: 789 QTPPPPTPPTESPTTP 804


>05_03_0382 +
           13342764-13342958,13343178-13343278,13343373-13343459,
           13343559-13343709,13343826-13344116,13346058-13346197,
           13346276-13346467,13346559-13346631,13346708-13346852,
           13347017-13347124,13347213-13347306,13348245-13348324,
           13348665-13348738,13349236-13349253
          Length = 582

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = -2

Query: 158 VDNYF--KIITFTSTLFNVNLKLEALISIKNIDHYMGISGDGRNLKNSL 18
           V+NY   +I T +S +F V+LK+      KN D Y+G++  G  L NSL
Sbjct: 519 VENYLSTRIQTISSDVFTVDLKV-LYKCFKNQD-YIGLNAGGEKLHNSL 565


>06_03_1310 + 29238644-29240260
          Length = 538

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/50 (30%), Positives = 18/50 (36%)
 Frame = +3

Query: 774 PVRSEYRPRPRSITPPDYDRPYSYAWSPVXXXXXXXXXXXAYGIPPTVPP 923
           P    Y   P+S  PP    P S+  SP             Y +PP  PP
Sbjct: 411 PPPPTYSESPKSSMPPSTSPPSSHGASPPSSSSSPPTEHPGYVLPPLTPP 460


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,403,651
Number of Sequences: 37544
Number of extensions: 505473
Number of successful extensions: 1208
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)