Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_E15
(1290 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 39 0.009
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 39 0.009
Z81527-9|CAI91172.1| 577|Caenorhabditis elegans Hypothetical pr... 32 1.0
Z81527-8|CAI91171.1| 537|Caenorhabditis elegans Hypothetical pr... 32 1.0
Z81527-7|CAI91170.1| 517|Caenorhabditis elegans Hypothetical pr... 32 1.0
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 32 1.0
AL032623-15|CAJ76975.1| 260|Caenorhabditis elegans Hypothetical... 31 2.3
AL032623-2|CAD54165.1| 312|Caenorhabditis elegans Hypothetical ... 31 2.3
AL032623-1|CAA21508.2| 309|Caenorhabditis elegans Hypothetical ... 31 2.3
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 29 7.1
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 29 7.1
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 38.7 bits (86), Expect = 0.009
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 537 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKI--SHELDERVAYICFRSAEDARDA 710
Y L +S + E +K L +E KKY F IK+ + E DER+AY+ F + AR
Sbjct: 33 YLNLRISGFDDRLEREQIKQYLTQELKKYAPFEIKVVKNPEEDERLAYVNFERNDCARKV 92
Query: 711 KH 716
++
Sbjct: 93 RY 94
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 38.7 bits (86), Expect = 0.009
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 537 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKI--SHELDERVAYICFRSAEDARDA 710
Y L +S + E +K L +E KKY F IK+ + E DER+AY+ F + AR
Sbjct: 33 YLNLRISGFDDRLEREQIKQYLTQELKKYAPFEIKVVKNPEEDERLAYVNFERNDCARKV 92
Query: 711 KH 716
++
Sbjct: 93 RY 94
>Z81527-9|CAI91172.1| 577|Caenorhabditis elegans Hypothetical
protein F35E12.7d protein.
Length = 577
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -2
Query: 224 QTLITQQITENLNLARXNSY*YVD--NYFKIITFTSTLFNVNLKLEALISIKNIDH 63
QTL + I++ NL +Y Y+D NY ++I T T FN L+ + +++ D+
Sbjct: 107 QTLPYEVISKTGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADN 162
>Z81527-8|CAI91171.1| 537|Caenorhabditis elegans Hypothetical
protein F35E12.7c protein.
Length = 537
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -2
Query: 224 QTLITQQITENLNLARXNSY*YVD--NYFKIITFTSTLFNVNLKLEALISIKNIDH 63
QTL + I++ NL +Y Y+D NY ++I T T FN L+ + +++ D+
Sbjct: 107 QTLPYEVISKTGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADN 162
>Z81527-7|CAI91170.1| 517|Caenorhabditis elegans Hypothetical
protein F35E12.7b protein.
Length = 517
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -2
Query: 224 QTLITQQITENLNLARXNSY*YVD--NYFKIITFTSTLFNVNLKLEALISIKNIDH 63
QTL + I++ NL +Y Y+D NY ++I T T FN L+ + +++ D+
Sbjct: 107 QTLPYEVISKTGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADN 162
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -2
Query: 224 QTLITQQITENLNLARXNSY*YVD--NYFKIITFTSTLFNVNLKLEALISIKNIDH 63
QTL + I++ NL +Y Y+D NY ++I T T FN L+ + +++ D+
Sbjct: 107 QTLPYEVISKTGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADN 162
>AL032623-15|CAJ76975.1| 260|Caenorhabditis elegans Hypothetical
protein Y43F8B.1c protein.
Length = 260
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 489 DYVRSRDARDESVRSYYKVLCVSALHPKASDEIVKD 596
D+V + ++E RS YK +SA+ P DE+VKD
Sbjct: 93 DWVPVNNEQNELQRSIYKPARMSAVWPPPQDELVKD 128
>AL032623-2|CAD54165.1| 312|Caenorhabditis elegans Hypothetical
protein Y43F8B.1b protein.
Length = 312
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 489 DYVRSRDARDESVRSYYKVLCVSALHPKASDEIVKD 596
D+V + ++E RS YK +SA+ P DE+VKD
Sbjct: 142 DWVPVNNEQNELQRSIYKPARMSAVWPPPQDELVKD 177
>AL032623-1|CAA21508.2| 309|Caenorhabditis elegans Hypothetical
protein Y43F8B.1a protein.
Length = 309
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 489 DYVRSRDARDESVRSYYKVLCVSALHPKASDEIVKD 596
D+V + ++E RS YK +SA+ P DE+VKD
Sbjct: 142 DWVPVNNEQNELQRSIYKPARMSAVWPPPQDELVKD 177
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 285 DRDRDRITVKIRNMK-RSSSRDSMPRS-KRTRS 377
DRDRDR + R+ K RS SRD+ R KR+RS
Sbjct: 317 DRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRS 349
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 285 DRDRDRITVKIRNMK-RSSSRDSMPRS-KRTRS 377
DRDRDR + R+ K RS SRD+ R KR+RS
Sbjct: 317 DRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRS 349
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,192,196
Number of Sequences: 27780
Number of extensions: 428533
Number of successful extensions: 1188
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3610322468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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