Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E14
         (1303 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0473 - 17906802-17907964,17908175-17908871,17910323-17910784     31   1.5  
04_03_0625 + 18126856-18127444,18127561-18127725,18127827-18127834     31   2.6  
02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704     30   4.6  
09_04_0563 + 18546967-18547407,18547503-18548007,18548271-185483...    29   6.1  
09_02_0533 - 10325681-10326211,10326260-10326328,10326758-103268...    29   6.1  
03_02_0635 + 9994327-9994644,9995510-9995706,9995806-9995941,999...    29   6.1  
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170...    29   6.1  
08_02_1119 - 24436942-24437565,24438380-24438502,24439264-24439626     29   8.0  

>09_04_0473 - 17906802-17907964,17908175-17908871,17910323-17910784
          Length = 773

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 772 CIALDSVCVDAPSSRGVECKTDVAGQQSSPILLTGEE 662
           C++ +S CVDA + RG  CK    G + +P +  G E
Sbjct: 273 CVSSNSYCVDATNGRGYRCKCS-DGYKGNPYITDGCE 308


>04_03_0625 + 18126856-18127444,18127561-18127725,18127827-18127834
          Length = 253

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -1

Query: 772 CIALDSVCVDAPSSRGVECKTDVAGQQSSPILLTGEEXXXXXXXXXVYH 626
           CI+ +SVCV++ S  G  C     G Q +P LL G +          YH
Sbjct: 161 CISSNSVCVNSSSGPGYICNC-THGYQGNPYLLHGCQDIDECEEHENYH 208


>02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704
          Length = 748

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 772 CIALDSVCVDAPSSRGVECKTDVAGQQSSPILLTG 668
           C++ DS CVD+ +  G  C    AG + +P LL G
Sbjct: 263 CVSRDSECVDSRNGPGYLCNCS-AGFEGNPYLLDG 296


>09_04_0563 +
           18546967-18547407,18547503-18548007,18548271-18548314,
           18548639-18548734,18548830-18549340,18549506-18549540
          Length = 543

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 702 ATSVLHSTPRLDGASTQTESSAMQRKTQ 785
           AT +L   PR+DGAS+   S+A  R+ Q
Sbjct: 190 ATGILQRFPRVDGASSSASSAADAREVQ 217


>09_02_0533 -
           10325681-10326211,10326260-10326328,10326758-10326855,
           10326968-10327117,10327848-10327976,10328063-10328999
          Length = 637

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
 Frame = +2

Query: 266 CPDGLHFNPSVEWPAYP---CGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNASPTN 436
           C DG   NP +    +    C  P + +C G  +  P     DCP  Y   +   ++P  
Sbjct: 297 CSDGYQGNPYIRGGCHDIDECKSPQDYSCYGNCNNTPGSHICDCPRGY---ERNASTPNG 353

Query: 437 CGQYRTC 457
           C     C
Sbjct: 354 CKDIDEC 360


>03_02_0635 +
           9994327-9994644,9995510-9995706,9995806-9995941,
           9996019-9996270,9996356-9996588,9996695-9996812,
           9996884-9997036,9997126-9997212,9997407-9997697
          Length = 594

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 191 NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWP 307
           +G+YK +  C  Y++  D+      CPDG  F+P  + P
Sbjct: 428 HGFYKANGGCG-YVKKPDFMMQT--CPDGNVFDPKADLP 463


>03_01_0216 -
           1700223-1700666,1700749-1700860,1701534-1701837,
           1702358-1702426,1702543-1702657,1702740-1702811,
           1702918-1703016,1703148-1703219,1703394-1703465,
           1704940-1705154,1705277-1705495,1705792-1707076,
           1707270-1707398
          Length = 1068

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 27/84 (32%), Positives = 36/84 (42%)
 Frame = -2

Query: 612 LPIASKGAGGQVKPKNFSASQEGTRSAQSQRLKSGLNASPGGHTMSKARPPTHVRYWPQL 433
           +P AS+G  G ++P  F A+Q G    QSQ    G N  P   +    RP         L
Sbjct: 178 MPAASQG--GALQPTQF-ATQRGM---QSQPPSMGFNQQPPPSSTGFMRPTQPGAPAASL 231

Query: 432 VGEALGCLKMPYWCGQSGVVWAGW 361
            G+  G  ++P   G  G   AGW
Sbjct: 232 QGQGPGINQVPLGGGSMGAP-AGW 254


>08_02_1119 - 24436942-24437565,24438380-24438502,24439264-24439626
          Length = 369

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 521 RCDWADLVPSCDAEKFLGFT 580
           +CDW  ++  C  + FLGFT
Sbjct: 167 QCDWHSILKMCQVQGFLGFT 186


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,887,133
Number of Sequences: 37544
Number of extensions: 714737
Number of successful extensions: 3959
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3901
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4062238548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)