Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_E13
(1314 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457153-1|CAG33434.1| 475|Homo sapiens SPG3A protein. 34 1.3
BC010708-1|AAH10708.2| 558|Homo sapiens spastic paraplegia 3A (... 34 1.3
AY032844-1|AAK51160.1| 475|Homo sapiens GTPase protein. 34 1.3
AK223436-1|BAD97156.1| 558|Homo sapiens atlastin variant protein. 34 1.3
AF444143-1|AAL37898.1| 558|Homo sapiens brain-specific GTP-bind... 34 1.3
AF131801-1|AAD20047.1| 475|Homo sapiens Unknown protein. 34 1.3
U52100-1|AAC51779.1| 167|Homo sapiens XMP protein. 32 5.3
BC009687-1|AAH09687.1| 167|Homo sapiens epithelial membrane pro... 32 5.3
AY057060-1|AAL27085.1| 167|Homo sapiens epithelial membrane pro... 32 5.3
BC131820-1|AAI31821.1| 1976|Homo sapiens FRAS1 protein protein. 31 7.1
BC064487-1|AAH64487.1| 651|Homo sapiens FRAS1 protein protein. 31 7.1
BC052281-1|AAH52281.1| 651|Homo sapiens FRAS1 protein protein. 31 7.1
AK027833-1|BAB55399.1| 441|Homo sapiens protein ( Homo sapiens ... 31 7.1
AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix pr... 31 7.1
X94770-1|CAA64393.1| 167|Homo sapiens epithelial membrane prote... 31 9.3
>CR457153-1|CAG33434.1| 475|Homo sapiens SPG3A protein.
Length = 475
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 599 DDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVG 700
+D+ N H AR+ LF+V F+T IA TG +G
Sbjct: 353 NDSKNIFHAARTPATLFVVIFITYVIAGVTGFIG 386
>BC010708-1|AAH10708.2| 558|Homo sapiens spastic paraplegia 3A
(autosomal dominant) protein.
Length = 558
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 599 DDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVG 700
+D+ N H AR+ LF+V F+T IA TG +G
Sbjct: 436 NDSKNIFHAARTPATLFVVIFITYVIAGVTGFIG 469
>AY032844-1|AAK51160.1| 475|Homo sapiens GTPase protein.
Length = 475
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 599 DDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVG 700
+D+ N H AR+ LF+V F+T IA TG +G
Sbjct: 353 NDSKNIFHAARTPATLFVVIFITYVIAGVTGFIG 386
>AK223436-1|BAD97156.1| 558|Homo sapiens atlastin variant protein.
Length = 558
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 599 DDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVG 700
+D+ N H AR+ LF+V F+T IA TG +G
Sbjct: 436 NDSKNIFHAARTPATLFVVIFITYVIAGVTGFIG 469
>AF444143-1|AAL37898.1| 558|Homo sapiens brain-specific GTP-binding
protein protein.
Length = 558
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 599 DDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVG 700
+D+ N H AR+ LF+V F+T IA TG +G
Sbjct: 436 NDSKNIFHAARTPATLFVVIFITYVIAGVTGFIG 469
>AF131801-1|AAD20047.1| 475|Homo sapiens Unknown protein.
Length = 475
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 599 DDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVG 700
+D+ N H AR+ LF+V F+T IA TG +G
Sbjct: 353 NDSKNIFHAARTPATLFVVIFITYVIAGVTGFIG 386
>U52100-1|AAC51779.1| 167|Homo sapiens XMP protein.
Length = 167
Score = 31.9 bits (69), Expect = 5.3
Identities = 25/126 (19%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +2
Query: 575 NNETKGLSDDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVGCWKRSPGN-ITATAILML 751
NN + +D+ ++ A I++ + IAF+ V+ ++ G T+I+ L
Sbjct: 44 NNTNCTVINDSFQEYSTLQAVQATMILSTILCCIAFFIFVLQLFRLKQGERFVLTSIIQL 103
Query: 752 VTCLLSAGAMALWHGVEFYEKEKVVGEEFYQQWPNILRDNSRVWYDWSYMVAWCGVXLSL 931
++CL A ++ + ++ + + ++ + +P + R+ S Y +SY++AW +
Sbjct: 104 MSCLCVMIAASI-----YTDRREDIHDKNAKFYP-VTREGS---YGYSYILAWVAFACTF 154
Query: 932 LSAIXF 949
+S + +
Sbjct: 155 ISGMMY 160
>BC009687-1|AAH09687.1| 167|Homo sapiens epithelial membrane
protein 2 protein.
Length = 167
Score = 31.9 bits (69), Expect = 5.3
Identities = 25/126 (19%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +2
Query: 575 NNETKGLSDDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVGCWKRSPGN-ITATAILML 751
NN + +D+ ++ A I++ + IAF+ V+ ++ G T+I+ L
Sbjct: 44 NNTNCTVINDSFQEYSTLQAVQATMILSTILCCIAFFIFVLQLFRLKQGERFVLTSIIQL 103
Query: 752 VTCLLSAGAMALWHGVEFYEKEKVVGEEFYQQWPNILRDNSRVWYDWSYMVAWCGVXLSL 931
++CL A ++ + ++ + + ++ + +P + R+ S Y +SY++AW +
Sbjct: 104 MSCLCVMIAASI-----YTDRREDIHDKNAKFYP-VTREGS---YGYSYILAWVAFACTF 154
Query: 932 LSAIXF 949
+S + +
Sbjct: 155 ISGMMY 160
>AY057060-1|AAL27085.1| 167|Homo sapiens epithelial membrane
protein 2 protein.
Length = 167
Score = 31.9 bits (69), Expect = 5.3
Identities = 25/126 (19%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +2
Query: 575 NNETKGLSDDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVGCWKRSPGN-ITATAILML 751
NN + +D+ ++ A I++ + IAF+ V+ ++ G T+I+ L
Sbjct: 44 NNTNCTVINDSFQEYSTLQAVQATMILSTILCCIAFFIFVLQLFRLKQGERFVLTSIIQL 103
Query: 752 VTCLLSAGAMALWHGVEFYEKEKVVGEEFYQQWPNILRDNSRVWYDWSYMVAWCGVXLSL 931
++CL A ++ + ++ + + ++ + +P + R+ S Y +SY++AW +
Sbjct: 104 MSCLCVMIAASI-----YTDRREDIHDKNAKFYP-VTREGS---YGYSYILAWVAFACTF 154
Query: 932 LSAIXF 949
+S + +
Sbjct: 155 ISGMMY 160
>BC131820-1|AAI31821.1| 1976|Homo sapiens FRAS1 protein protein.
Length = 1976
Score = 31.5 bits (68), Expect = 7.1
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2
Query: 485 SRCGKDLSFWYRRNICCSSCRG*PASCPPSSPQRMTEC*IALLLYRANCL 336
S CGK +Y R CS+C SC PSSP+ +T C +L+ C+
Sbjct: 545 SSCGKG---FYNRQGTCSACDQSCDSCGPSSPRCLT-CTEKTVLHDGKCM 590
>BC064487-1|AAH64487.1| 651|Homo sapiens FRAS1 protein protein.
Length = 651
Score = 31.5 bits (68), Expect = 7.1
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2
Query: 485 SRCGKDLSFWYRRNICCSSCRG*PASCPPSSPQRMTEC*IALLLYRANCL 336
S CGK +Y R CS+C SC PSSP+ +T C +L+ C+
Sbjct: 387 SSCGKG---FYNRQGTCSACDQSCDSCGPSSPRCLT-CTEKTVLHDGKCM 432
>BC052281-1|AAH52281.1| 651|Homo sapiens FRAS1 protein protein.
Length = 651
Score = 31.5 bits (68), Expect = 7.1
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2
Query: 485 SRCGKDLSFWYRRNICCSSCRG*PASCPPSSPQRMTEC*IALLLYRANCL 336
S CGK +Y R CS+C SC PSSP+ +T C +L+ C+
Sbjct: 387 SSCGKG---FYNRQGTCSACDQSCDSCGPSSPRCLT-CTEKTVLHDGKCM 432
>AK027833-1|BAB55399.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ14927 fis, clone PLACE1009094, weakly similar to
FURIN-LIKE PROTEASE 2 PRECURSOR (EC 3.4.21.75). ).
Length = 441
Score = 31.5 bits (68), Expect = 7.1
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2
Query: 485 SRCGKDLSFWYRRNICCSSCRG*PASCPPSSPQRMTEC*IALLLYRANCL 336
S CGK +Y R CS+C SC PSSP+ +T C +L+ C+
Sbjct: 249 SSCGKG---FYNRQGTCSACDQSCDSCGPSSPRCLT-CTEKTVLHDGKCM 294
>AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix
protein protein.
Length = 4007
Score = 31.5 bits (68), Expect = 7.1
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2
Query: 485 SRCGKDLSFWYRRNICCSSCRG*PASCPPSSPQRMTEC*IALLLYRANCL 336
S CGK +Y R CS+C SC PSSP+ +T C +L+ C+
Sbjct: 545 SSCGKG---FYNRQGTCSACDQSCDSCGPSSPRCLT-CTEKTVLHDGKCM 590
>X94770-1|CAA64393.1| 167|Homo sapiens epithelial membrane protein
protein.
Length = 167
Score = 31.1 bits (67), Expect = 9.3
Identities = 25/126 (19%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +2
Query: 575 NNETKGLSDDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVGCWKRSPGN-ITATAILML 751
NN + +D+ ++ A I++ + IAF+ V+ ++ G T+I+ L
Sbjct: 44 NNTNCTVINDSFQEYSTLQAFQATMILSTILCCIAFFIFVLQLFRLKQGERFVLTSIIQL 103
Query: 752 VTCLLSAGAMALWHGVEFYEKEKVVGEEFYQQWPNILRDNSRVWYDWSYMVAWCGVXLSL 931
++CL A ++ + ++ + + ++ + +P + R+ S Y +SY++AW +
Sbjct: 104 MSCLCVMIAASI-----YTDRREDIHDKNAKFYP-VTREGS---YGYSYILAWVAFACTF 154
Query: 932 LSAIXF 949
+S + +
Sbjct: 155 ISGMMY 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,360,887
Number of Sequences: 237096
Number of extensions: 3130609
Number of successful extensions: 7207
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7138
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18990949350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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