Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E13
         (1314 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060411-1|AAL25450.1|  290|Drosophila melanogaster LD36024p pro...   293   3e-79
AE014298-2612|AAF48766.1|  290|Drosophila melanogaster CG6398-PA...   293   3e-79
AE014296-1525|AAF50362.1|  438|Drosophila melanogaster CG13307-P...    33   0.87 

>AY060411-1|AAL25450.1|  290|Drosophila melanogaster LD36024p
           protein.
          Length = 290

 Score =  293 bits (719), Expect = 3e-79
 Identities = 132/214 (61%), Positives = 172/214 (80%), Gaps = 2/214 (0%)
 Frame = +2

Query: 329 FSTDNWLYIEVKRSNIQSYAAENSAGNSQVILDSLNNKYFFYTRTRGLFRICYPKERPPT 508
           FSTDNWL+ +V R+ IQS+AA++S   S  +L ++N KY++YTRTRGLFRICYPKERPP 
Sbjct: 26  FSTDNWLHYDVWRNQIQSFAAKHSDAES--LLHNMNVKYYYYTRTRGLFRICYPKERPPV 83

Query: 509 --VEIYLSPVETHCSNVDYFIPDENNETKGLSDDAMNRLHMARSTVALFIVAFLTLFIAF 682
             V  YLSP+ETHCSN+DYF P   +E K  ++DA +RLH+ARS +ALFI++F+T+F AF
Sbjct: 84  SAVPTYLSPIETHCSNIDYF-PQAEDE-KIANEDATSRLHLARSCIALFIISFVTIFCAF 141

Query: 683 WTGVVGCWKRSPGNITATAILMLVTCLLSAGAMALWHGVEFYEKEKVVGEEFYQQWPNIL 862
           WTG+ GCWKRS G ITAT+IL+LVTCLL+AGAM LWH VEF+EKEKVVGE+++QQW  +L
Sbjct: 142 WTGLSGCWKRSSGAITATSILLLVTCLLAAGAMGLWHTVEFFEKEKVVGEDYFQQWNTVL 201

Query: 863 RDNSRVWYDWSYMVAWCGVXLSLLSAIXFPSXAI 964
           RDN+++ YDWSY+VAW G+   LL++I     A+
Sbjct: 202 RDNTKIAYDWSYIVAWAGIGTCLLASILLSGAAV 235


>AE014298-2612|AAF48766.1|  290|Drosophila melanogaster CG6398-PA
           protein.
          Length = 290

 Score =  293 bits (719), Expect = 3e-79
 Identities = 132/214 (61%), Positives = 172/214 (80%), Gaps = 2/214 (0%)
 Frame = +2

Query: 329 FSTDNWLYIEVKRSNIQSYAAENSAGNSQVILDSLNNKYFFYTRTRGLFRICYPKERPPT 508
           FSTDNWL+ +V R+ IQS+AA++S   S  +L ++N KY++YTRTRGLFRICYPKERPP 
Sbjct: 26  FSTDNWLHYDVWRNQIQSFAAKHSDAES--LLHNMNVKYYYYTRTRGLFRICYPKERPPV 83

Query: 509 --VEIYLSPVETHCSNVDYFIPDENNETKGLSDDAMNRLHMARSTVALFIVAFLTLFIAF 682
             V  YLSP+ETHCSN+DYF P   +E K  ++DA +RLH+ARS +ALFI++F+T+F AF
Sbjct: 84  SAVPTYLSPIETHCSNIDYF-PQAEDE-KIANEDATSRLHLARSCIALFIISFVTIFCAF 141

Query: 683 WTGVVGCWKRSPGNITATAILMLVTCLLSAGAMALWHGVEFYEKEKVVGEEFYQQWPNIL 862
           WTG+ GCWKRS G ITAT+IL+LVTCLL+AGAM LWH VEF+EKEKVVGE+++QQW  +L
Sbjct: 142 WTGLSGCWKRSSGAITATSILLLVTCLLAAGAMGLWHTVEFFEKEKVVGEDYFQQWNTVL 201

Query: 863 RDNSRVWYDWSYMVAWCGVXLSLLSAIXFPSXAI 964
           RDN+++ YDWSY+VAW G+   LL++I     A+
Sbjct: 202 RDNTKIAYDWSYIVAWAGIGTCLLASILLSGAAV 235


>AE014296-1525|AAF50362.1|  438|Drosophila melanogaster CG13307-PA
           protein.
          Length = 438

 Score = 33.1 bits (72), Expect = 0.87
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 428 SLNNKYFFYTRTRGLFRICYPKERPPTVEIYLSPVETHC--SNVDYFIPDENNET 586
           S N  Y F  ++RG+F++CY   R PT +    P  T C  S+    +P+   +T
Sbjct: 299 SANRNYLFACQSRGIFQMCYGATR-PTGQFGYCPTGTVCDASSTAICVPEVAGQT 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,203,863
Number of Sequences: 53049
Number of extensions: 955057
Number of successful extensions: 3225
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3205
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7130586750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)