Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E13
         (1314 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              24   2.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   3.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   4.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   7.8  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 88  DDRIHEFL-LNSECAVVFSVPLCLRKCCIGEP 180
           DD   +FL +N EC V  S  LC+ K     P
Sbjct: 119 DDVHRKFLHVNDECDVALSFKLCMLKAMRNYP 150


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 548 NVDYFIPDENNETKGLSDDAMNRL-HMARSTVALFIV 655
           N++ F P+EN   + LS   +NR+ H+  ++ A+ I+
Sbjct: 34  NLENFFPEENVVEELLSPLTLNRITHILANSPAIIIL 70


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +2

Query: 524 SPVETHCSNVDYFIPDENNETKGLSDDAMNRLHMARSTVALFIVAFLTLFI 676
           S +E  CS +DYF    N E      D+   +  A +  A+F  A  +L +
Sbjct: 112 SRMEYECSRIDYF---PNEEYSPDPSDSTMAIPYAVTKSAMFFFAATSLLV 159


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 610 EQATYGSVNGGVVHCGVLDVV 672
           ++ T+ SVNG  VH G ++ V
Sbjct: 119 QECTFISVNGKEVHSGNIEAV 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,191
Number of Sequences: 438
Number of extensions: 6013
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 45263751
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)