Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_E12
(1355 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA... 180 5e-45
M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal prot... 165 1e-40
U43733-1|AAA86639.1| 904|Drosophila melanogaster Abrupt protein. 31 4.8
BT003807-1|AAO41490.1| 369|Drosophila melanogaster AT11330p pro... 31 4.8
BT001583-1|AAN71338.1| 894|Drosophila melanogaster RE25924p pro... 31 4.8
AE014134-2051|AAN10774.1| 894|Drosophila melanogaster CG4807-PB... 31 4.8
AE014134-2050|AAF53087.2| 904|Drosophila melanogaster CG4807-PA... 31 4.8
>AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA
protein.
Length = 140
Score = 180 bits (437), Expect = 5e-45
Identities = 84/87 (96%), Positives = 85/87 (97%)
Frame = +3
Query: 198 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 377
I+GRLNRLPAAG GDM VATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 104
Query: 378 IVNNKGEMKGSAITGPVAKECADLWPR 458
IVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 128 LGAVINCADNTGAKNLYVIAVQG 196
+GAV+NCADNTGAKNLYVIAV G
Sbjct: 22 VGAVMNCADNTGAKNLYVIAVHG 44
Score = 46.4 bits (105), Expect = 9e-05
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 64 MSKRGRGGSAGAKFRISLGLPAGS 135
MSKRGRGG+AG KFRISLGLP G+
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGA 24
>M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal protein
L17A protein.
Length = 140
Score = 165 bits (401), Expect = 1e-40
Identities = 78/87 (89%), Positives = 79/87 (90%)
Frame = +3
Query: 198 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 377
I+GRLNRLPAAG GDM VATVKKGKPELRKKV RQRKPFRRRDGVFIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVSVVPSARQRKPFRRRDGVFIYFEDNAGV 104
Query: 378 IVNNKGEMKGSAITGPVAKECADLWPR 458
IVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 128 LGAVINCADNTGAKNLYVIAVQG 196
+GAV+NCADNTGAKNLYVIAV G
Sbjct: 22 VGAVMNCADNTGAKNLYVIAVHG 44
Score = 46.4 bits (105), Expect = 9e-05
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 64 MSKRGRGGSAGAKFRISLGLPAGS 135
MSKRGRGG+AG KFRISLGLP G+
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGA 24
>U43733-1|AAA86639.1| 904|Drosophila melanogaster Abrupt protein.
Length = 904
Score = 30.7 bits (66), Expect = 4.8
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 370 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIA 194
A+ N P LL G F AG F SG P LT+ IM E AAG+L +A
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPLA 843
Query: 193 LDS 185
L+S
Sbjct: 844 LNS 846
>BT003807-1|AAO41490.1| 369|Drosophila melanogaster AT11330p
protein.
Length = 369
Score = 30.7 bits (66), Expect = 4.8
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 370 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIA 194
A+ N P LL G F AG F SG P LT+ IM E AAG+L +A
Sbjct: 250 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPLA 308
Query: 193 LDS 185
L+S
Sbjct: 309 LNS 311
>BT001583-1|AAN71338.1| 894|Drosophila melanogaster RE25924p
protein.
Length = 894
Score = 30.7 bits (66), Expect = 4.8
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 370 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIA 194
A+ N P LL G F AG F SG P LT+ IM E AAG+L +A
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPLA 833
Query: 193 LDS 185
L+S
Sbjct: 834 LNS 836
>AE014134-2051|AAN10774.1| 894|Drosophila melanogaster CG4807-PB,
isoform B protein.
Length = 894
Score = 30.7 bits (66), Expect = 4.8
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 370 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIA 194
A+ N P LL G F AG F SG P LT+ IM E AAG+L +A
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPLA 833
Query: 193 LDS 185
L+S
Sbjct: 834 LNS 836
>AE014134-2050|AAF53087.2| 904|Drosophila melanogaster CG4807-PA,
isoform A protein.
Length = 904
Score = 30.7 bits (66), Expect = 4.8
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 370 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIA 194
A+ N P LL G F AG F SG P LT+ IM E AAG+L +A
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPLA 843
Query: 193 LDS 185
L+S
Sbjct: 844 LNS 846
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,398,952
Number of Sequences: 53049
Number of extensions: 961919
Number of successful extensions: 2280
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2280
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7415810220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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