Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E11
         (1270 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0328 + 2553850-2553902,2553990-2554050,2554163-2554321          119   6e-27

>03_01_0328 + 2553850-2553902,2553990-2554050,2554163-2554321
          Length = 90

 Score =  119 bits (286), Expect = 6e-27
 Identities = 44/68 (64%), Positives = 60/68 (88%)
 Frame = +3

Query: 192 QIQYSERYTDDVYEYRHVILPPDIARMVPKSHLMTETEWRNLGVQQSPGWLHFMVHNPEP 371
           QIQYSE+Y DD YEYRHV+LPP++A+++PK+ L++E EWR +GVQQS GW+H+ +H PEP
Sbjct: 3   QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 62

Query: 372 HVLLFRRP 395
           H++LFRRP
Sbjct: 63  HIMLFRRP 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,731,401
Number of Sequences: 37544
Number of extensions: 469164
Number of successful extensions: 846
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3934202376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)