Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E10
         (1344 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         30   0.18 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   1.6  
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    25   3.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   8.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 29.9 bits (64), Expect = 0.18
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
 Frame = +1

Query: 187  LDLYFVRERNSKREIKLLNMLLFIKSTLWKVLFGKEADKLEHANDDERTYYIIE--KDAL 360
            LDL   R + S  +++++N   F+K T  KVL  +++  L  AN  E  ++I+   K A+
Sbjct: 913  LDLCPQRVKLSAHQLEMVNC--FVKYTFTKVLRLQKSLMLYDANATENCFFIVPTVKQAV 970

Query: 361  VNKFISVPKDKGSLNC--AIFNAGIIEAVLT---RSGFPAKVTAHWHKGTTYMV-KFDDS 522
                 +  KD+  L     + +   +E + T   RSG P  +     KG T+ V KF D+
Sbjct: 971  AG---AAGKDEPPLQSDDVMVDWEFVEKIATNVHRSG-PTFIPDEARKGYTFDVGKFRDA 1026

Query: 523  VI 528
            V+
Sbjct: 1027 VV 1028


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 333 LLYYRERCSCKQVYKCTKRQGFIKLC 410
           ++Y   R   ++  K +KRQ F+KLC
Sbjct: 312 IVYIAARSELQRAIKASKRQHFLKLC 337


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = +1

Query: 205 RERNSKREIKLLNMLLFIKST--LWK 276
           RERN+ +    LN+LL IK+T  LW+
Sbjct: 259 RERNNVKRNDFLNLLLQIKNTGKLWE 284


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 94  EIVQYSQNRSHSIQDLQFKLSEIGQDVGTRLLDLYFVRERN 216
           E++Q + NRS S QDL      + +     +++L+ V   N
Sbjct: 2   EVLQINVNRSRSAQDLALNTMRVERADVCLMVELHSVPRNN 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 922,946
Number of Sequences: 2352
Number of extensions: 15696
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 154430100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)