Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E09
         (1232 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    27   0.25 
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   7.2  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   9.6  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 27.5 bits (58), Expect = 0.25
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = -1

Query: 827 LGHGRQLWSEEVRSYGCNERQPLRRGLGAVDPQQQR-AHLAGVADGHVR--HELHSARHD 657
           LG     WS++        +Q ++  + AV   QQR  H A +  GH +  H LH     
Sbjct: 760 LGQQGNSWSQQQVQQAQQVQQQMQAAMAAVQQSQQRHQHAAQMIYGHQQSHHGLHINSSP 819

Query: 656 DVIRAGR 636
             +++G+
Sbjct: 820 SSVQSGQ 826



 Score = 22.2 bits (45), Expect = 9.6
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 7/36 (19%)
 Frame = +2

Query: 845  HGPQRGQAGGRLRS-------LATGAGPVRAGLAHA 931
            +G QRGQ+GG+  S          G+G V +G  HA
Sbjct: 896  YGMQRGQSGGQTWSNSQVQGVAVPGSGIVASGQQHA 931


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 618 TGIGMIAAGAYDVIVAGGVEFMSDVPIRHSRKMRSLLLRINRAKTPAQRL 767
           T IG+     +D    GG+E +S +  +      S+L+  N A   A  +
Sbjct: 113 TAIGLSLIKGFDKKQGGGIELISHIISKQLHIPVSVLMGANLASEVANEM 162


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 369 MECGLHRQGPHSCLYGLGEISSAAVLVLHS 280
           +E GL ++GP    YG G +S+   L LH+
Sbjct: 382 VEFGLCKEGPDVKAYGAGLLSAYGEL-LHA 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 281,169
Number of Sequences: 438
Number of extensions: 5898
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42022050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)