Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E08
         (1346 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   103   9e-24
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   3.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   8.7  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  103 bits (248), Expect = 9e-24
 Identities = 49/113 (43%), Positives = 67/113 (59%)
 Frame = +1

Query: 376 LQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIR 555
           + + GS +  + +KFQ+N+DVQ FSP+EI+                 QD HGYVSR F+R
Sbjct: 1   MHDSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVR 60

Query: 556 RYALPQGCLPDTVESKLSSDGVLTVTAPKVLALPSTGEKIVPITHTGPVMKKV 714
           RY LP+G     + S LSSDG+LT+T P+        E+ +PITHTG  MK+V
Sbjct: 61  RYMLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQV 113


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 632 VTVRTPSEDNFDSTVSGKQPCGSAYRLMNCL 540
           VTV  P+++  DS+ SG  P  S+   ++CL
Sbjct: 59  VTVPAPAKELTDSSRSGGLPSSSSSSSLSCL 89


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 696 SCDEEGRISGAFSCHCVVGFIQC 764
           +CDE G +    SC  V G   C
Sbjct: 445 NCDERGSLDNTPSCDPVTGVCSC 467


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 974,394
Number of Sequences: 2352
Number of extensions: 17923
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 154836495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)