Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E06
         (1290 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0311 + 22218219-22218421,22219157-22219422,22219881-222200...    30   4.6  
07_03_1540 - 27570605-27571375,27571474-27572748,27572769-275729...    29   6.0  
01_06_0128 - 26727484-26728383                                         29   8.0  

>09_06_0311 + 22218219-22218421,22219157-22219422,22219881-22220050,
            22220149-22220365,22220798-22221021,22221559-22221738,
            22221875-22222013,22222107-22222255,22223394-22223505,
            22223998-22224506,22224661-22224784,22224904-22225178,
            22225507-22225626,22225707-22225769,22225861-22226052,
            22226381-22226440,22226535-22226738,22226926-22227051,
            22227093-22227254,22227357-22227476,22227665-22227820,
            22227895-22227957,22228041-22228168,22228524-22228920,
            22229442-22229544,22229646-22229776,22230096-22230167,
            22230472-22230553,22231083-22231190,22231288-22231429,
            22231659-22231698,22231746-22231876,22232215-22232301,
            22232395-22232605,22232687-22232741,22232836-22232927,
            22233011-22233071,22233361-22233719
          Length = 2010

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/55 (23%), Positives = 28/55 (50%)
 Frame = -1

Query: 864  SCVLSVYLFIKIIAIITMSYFSFIKYSSPNYFMLTEF*NQWRSVSLHVGEETLTI 700
            SC+  +Y  I  I+++ +     I +S     +   F  ++  + +H+G+ETL +
Sbjct: 1032 SCISDLYTLIACISVVFVFLIVKILFSFHLVILYDNFLYKYMGIEVHLGDETLEL 1086


>07_03_1540 -
           27570605-27571375,27571474-27572748,27572769-27572921,
           27572923-27573159
          Length = 811

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 20/59 (33%), Positives = 32/59 (54%)
 Frame = +2

Query: 284 KTLDQLAKGYKVSNWLEAPGSSHFPENEANRPLIITTRPINSRNPSQQNNTCSINSAGR 460
           KT+   AK  +V NW+    ++ F E+EA R  ++ T P + R   Q   TC + ++GR
Sbjct: 756 KTVVWSAKSGQVVNWVYEEANATFIEDEAMRKRLMDTNPNSFRKLVQ---TC-LEASGR 810


>01_06_0128 - 26727484-26728383
          Length = 299

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 401 INSRNPSQQNN-TCSINSAGRDASVSLQRSSTNTNNAVPNSPRNILQQEPTL 553
           I  R PS   N + S NSAG    V++   S   ++   +SP ++L++ P+L
Sbjct: 147 IQLRGPSATTNFSASTNSAGAQDPVAVGYESGAESSPAVSSPTSVLRKVPSL 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,414,502
Number of Sequences: 37544
Number of extensions: 486177
Number of successful extensions: 1068
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)