Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E05
         (1275 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069428-1|AAL39573.1|  844|Drosophila melanogaster LD13864p pro...    30   5.9  
AE013599-91|AAF57324.2|  844|Drosophila melanogaster CG8426-PA p...    30   5.9  

>AY069428-1|AAL39573.1|  844|Drosophila melanogaster LD13864p
           protein.
          Length = 844

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +3

Query: 270 SGQSANHAGLIPG-LTSASGSLDNLGLNDLSEALGLNSGISSLQDPHLLSKPLNALGVLT 446
           SG SA  A L    LT+A  + +N+G    S+    +S  ++  DP   +  +N +G L 
Sbjct: 289 SGSSAASAALFQQQLTAAQSNGNNVGY--ASDTSAASSSATTSTDPAGGTVAVNCVGGLA 346

Query: 447 SKGQKVPDAIGLEPKPGP 500
            K  K  ++  L+ KP P
Sbjct: 347 DKRNKSSESNALKLKPQP 364


>AE013599-91|AAF57324.2|  844|Drosophila melanogaster CG8426-PA
           protein.
          Length = 844

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +3

Query: 270 SGQSANHAGLIPG-LTSASGSLDNLGLNDLSEALGLNSGISSLQDPHLLSKPLNALGVLT 446
           SG SA  A L    LT+A  + +N+G    S+    +S  ++  DP   +  +N +G L 
Sbjct: 289 SGSSAASAALFQQQLTAAQSNGNNVGY--ASDTSAASSSATTSTDPAGGTVAVNCVGGLA 346

Query: 447 SKGQKVPDAIGLEPKPGP 500
            K  K  ++  L+ KP P
Sbjct: 347 DKRNKSSESNALKLKPQP 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,684,935
Number of Sequences: 53049
Number of extensions: 683980
Number of successful extensions: 1871
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6865736385
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)