Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_E04
         (1318 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   2.1  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   3.7  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   3.7  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   3.7  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   3.7  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   3.7  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    25   4.9  
DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        25   6.5  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   8.6  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   8.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +3

Query: 651  PAANGGSPLPSDESNLEPPATNGNGKLVTDCVNEDTTTSCTEDSMDAKAXSPST 812
            P +N G+  P+  +      T GN K     V  DT T+  E ++ A    P++
Sbjct: 1167 PNSNAGAATPTATTAAPLAPTTGNSKGGGGVVQGDTATALDEVALPAPPAPPTS 1220


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 628 NNCGCKSDTMLCVQRASSTMCGNH 557
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 628 NNCGCKSDTMLCVQRASSTMCGNH 557
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 628 NNCGCKSDTMLCVQRASSTMCGNH 557
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 628 NNCGCKSDTMLCVQRASSTMCGNH 557
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 628 NNCGCKSDTMLCVQRASSTMCGNH 557
           +NC C +DT  C   ++  +C  H
Sbjct: 592 DNCECTTDTTGCKAPSNDAVCSGH 615


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 476 CCVIAAFHFGDCLDAFVSHKRCY 408
           CC++  F F   L  F+S   C+
Sbjct: 44  CCLVGTFPFNSFLAGFISTVSCF 66


>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -3

Query: 209 FHELDKFFVD----HVRIFTPRFDLLGKFILIPIV 117
           F ELD+  VD     V +  P+F+    + LIPI+
Sbjct: 308 FDELDRSLVDFDDDEVEVHLPKFEFNSDYNLIPIL 342


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 657 ANGGSPLPSDESNLEPPATNGNGKLVTDCVNEDTTTS 767
           A+ G PLP  E N    AT  + +L+T+     T T+
Sbjct: 184 ASFGDPLPWSECNDAWNATCIDSRLITNMAENSTATA 220


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 657 ANGGSPLPSDESNLEPPATNGNGKLVTDCVNEDTTTS 767
           A+ G PLP  E N    AT  + +L+T+     T T+
Sbjct: 184 ASFGDPLPWSECNDAWNATCIDSRLITNMAENSTATA 220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 962,241
Number of Sequences: 2352
Number of extensions: 21421
Number of successful extensions: 285
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152053884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)