Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_D23
         (1241 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81552-3|CAB04486.1|  470|Caenorhabditis elegans Hypothetical pr...    56   5e-08
U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical pr...    42   0.001
U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical pr...    42   0.001
U58758-6|AAO38577.1|  604|Caenorhabditis elegans Hypothetical pr...    41   0.002
U58758-5|AAL11107.1|  693|Caenorhabditis elegans Hypothetical pr...    41   0.002
Z22176-1|CAA80142.1|  724|Caenorhabditis elegans Hypothetical pr...    40   0.004
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    37   0.034
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    37   0.034
Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical pr...    33   0.32 
Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical pr...    33   0.32 
U58758-7|AAO38576.1|  220|Caenorhabditis elegans Hypothetical pr...    31   1.7  
U52002-6|AAB37732.1|  142|Caenorhabditis elegans Hypothetical pr...    31   2.2  
AC024746-15|AAF60409.1|  168|Caenorhabditis elegans Hypothetical...    30   3.0  
AL034392-2|CAA22305.1|  120|Caenorhabditis elegans Hypothetical ...    29   5.2  
Z99283-6|CAB16539.2|  556|Caenorhabditis elegans Hypothetical pr...    29   6.8  
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr...    29   9.0  
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr...    29   9.0  
AF099923-3|AAN63403.1|  784|Caenorhabditis elegans Ferm domain (...    29   9.0  
AF099923-2|AAM48544.1|  814|Caenorhabditis elegans Ferm domain (...    29   9.0  
AF099923-1|AAM48545.1|  853|Caenorhabditis elegans Ferm domain (...    29   9.0  

>Z81552-3|CAB04486.1|  470|Caenorhabditis elegans Hypothetical
           protein F56G4.4 protein.
          Length = 470

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 19/53 (35%), Positives = 32/53 (60%)
 Frame = +3

Query: 228 MTEYWKSQARKYCEFCKCWFADNKVSTSFHENGKKHKDKVQEHISKLSKKSAK 386
           M E W S  +++C+ CK WF +N+ S   H+ G++HK  +Q+ I +  +K  K
Sbjct: 1   MAEQWVSTGKRFCDICKVWFGNNRASQDHHDRGERHKAMLQQRIRETMQKGKK 53


>U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical
           protein ZK1127.9a protein.
          Length = 914

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +3

Query: 468 QNNADLTSQNINQMLGGDGSNKSN--PKIVASEIGTKSEPIWHEVKNQDGSSYYWNTITS 641
           QN   +T   + Q++      + N   ++   +I    +  W+E    DG  YY+N+IT 
Sbjct: 194 QNAKIVTQPELAQLIHRATEEEKNREERMPHGQIPQNPDDAWNEFNAPDGRKYYFNSITQ 253

Query: 642 ETTWEQP 662
           E TWE+P
Sbjct: 254 ENTWEKP 260



 Score = 31.1 bits (67), Expect = 1.7
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 570 KSEPIWHEVKNQDGSSYYWNTITSETTWEQP 662
           + + +W E +  +G  Y+++ +   T WE+P
Sbjct: 163 EGQELWVETETAEGKKYFYHPVNRNTIWERP 193


>U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical
           protein ZK1127.9b protein.
          Length = 905

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +3

Query: 468 QNNADLTSQNINQMLGGDGSNKSN--PKIVASEIGTKSEPIWHEVKNQDGSSYYWNTITS 641
           QN   +T   + Q++      + N   ++   +I    +  W+E    DG  YY+N+IT 
Sbjct: 185 QNAKIVTQPELAQLIHRATEEEKNREERMPHGQIPQNPDDAWNEFNAPDGRKYYFNSITQ 244

Query: 642 ETTWEQP 662
           E TWE+P
Sbjct: 245 ENTWEKP 251



 Score = 31.1 bits (67), Expect = 1.7
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 570 KSEPIWHEVKNQDGSSYYWNTITSETTWEQP 662
           + + +W E +  +G  Y+++ +   T WE+P
Sbjct: 154 EGQELWVETETAEGKKYFYHPVNRNTIWERP 184


>U58758-6|AAO38577.1|  604|Caenorhabditis elegans Hypothetical
           protein ZK1127.9e protein.
          Length = 604

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 558 EIGTKSEPIWHEVKNQDGSSYYWNTITSETTWEQP 662
           +I    +  W+E    DG  YY+N+IT E TWE+P
Sbjct: 5   QIPQNPDDAWNEFNAPDGRKYYFNSITQENTWEKP 39


>U58758-5|AAL11107.1|  693|Caenorhabditis elegans Hypothetical
           protein ZK1127.9c protein.
          Length = 693

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 558 EIGTKSEPIWHEVKNQDGSSYYWNTITSETTWEQP 662
           +I    +  W+E    DG  YY+N+IT E TWE+P
Sbjct: 5   QIPQNPDDAWNEFNAPDGRKYYFNSITQENTWEKP 39


>Z22176-1|CAA80142.1|  724|Caenorhabditis elegans Hypothetical
           protein ZK1098.1 protein.
          Length = 724

 Score = 39.9 bits (89), Expect = 0.004
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 555 SEIGTKSEPIWHEVKNQDGSSYYWNTITSETTWEQPD 665
           S  G   +  W E  + DG  YY+NT+T +T W +PD
Sbjct: 119 STSGQPQQGQWKEFMSDDGKPYYYNTLTKKTQWVKPD 155



 Score = 33.5 bits (73), Expect = 0.32
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 576 EPIWHEVKNQDGSSYYWNTITSETTWEQPD 665
           E  W    N+ G+ YY N +T +T+W +PD
Sbjct: 81  ESDWSVHTNEKGTPYYHNRVTKQTSWIKPD 110


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 36.7 bits (81), Expect = 0.034
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 570  KSEPIWHEVKNQDGSSYYWNTITSETTWEQP 662
            K++ +W   K++ G +YY+N IT ET W  P
Sbjct: 1347 KTKYVWAIAKSEAGETYYYNKITKETQWTAP 1377


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 36.7 bits (81), Expect = 0.034
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 570  KSEPIWHEVKNQDGSSYYWNTITSETTWEQP 662
            K++ +W   K++ G +YY+N IT ET W  P
Sbjct: 1361 KTKYVWAIAKSEAGETYYYNKITKETQWTAP 1391


>Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +3

Query: 525 SNKSNPKI--VASEIGTKSEPIWHEVKNQDGSSYYWNTITSETTWEQPD 665
           S KS P I  +AS   T  E  W    +     +Y N +T ET W +PD
Sbjct: 213 SKKSAPDIMEIASSSQTPPESHWKTYLDAKKRKFYVNHVTKETRWTKPD 261


>Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +3

Query: 525 SNKSNPKI--VASEIGTKSEPIWHEVKNQDGSSYYWNTITSETTWEQPD 665
           S KS P I  +AS   T  E  W    +     +Y N +T ET W +PD
Sbjct: 213 SKKSAPDIMEIASSSQTPPESHWKTYLDAKKRKFYVNHVTKETRWTKPD 261


>U58758-7|AAO38576.1|  220|Caenorhabditis elegans Hypothetical
           protein ZK1127.9d protein.
          Length = 220

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 570 KSEPIWHEVKNQDGSSYYWNTITSETTWEQP 662
           + + +W E +  +G  Y+++ +   T WE+P
Sbjct: 154 EGQELWVETETAEGKKYFYHPVNRNTIWERP 184


>U52002-6|AAB37732.1|  142|Caenorhabditis elegans Hypothetical
           protein F08B4.7 protein.
          Length = 142

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +3

Query: 261 YCEFCKCWFADNKVST-SFHENGKKHKDKVQEHISKLSKKSAK 386
           YC++C  +   +  S    H  G+KHKD V+    K  +  A+
Sbjct: 5   YCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQ 47


>AC024746-15|AAF60409.1|  168|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.13 protein.
          Length = 168

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 618 YYWNTITSETTWEQPDE 668
           YY+NT T  + WE+PDE
Sbjct: 22  YYFNTATGRSQWERPDE 38


>AL034392-2|CAA22305.1|  120|Caenorhabditis elegans Hypothetical
           protein Y40B1A.2 protein.
          Length = 120

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 585 WHEVKNQDGSSYYWNTITSETTWEQPDEY 671
           W E  +  G  YY+N  T  + W++P E+
Sbjct: 11  WTEQMSSSGKMYYYNKKTEISQWDKPAEW 39


>Z99283-6|CAB16539.2|  556|Caenorhabditis elegans Hypothetical
           protein Y70C5C.5 protein.
          Length = 556

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 453 YIKDVQNNADLTSQNINQMLGGDGSNKSNPK 545
           ++K+ ++  D++S     MLGGDG  + NPK
Sbjct: 52  FLKNYRDLVDISSLKTCWMLGGDGIQQVNPK 82


>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
           protein K01A6.2 protein.
          Length = 1092

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 579 PIWHEVKNQDGSSYYWNTITSETTWEQPDE 668
           P W     ++G  Y+ +  T  TTW+ P E
Sbjct: 302 PNWETAYTENGDKYFIDHNTGTTTWDDPRE 331


>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
           protein C52E12.4 protein.
          Length = 1487

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 576 EPIW-HEVKNQDGSSYYWNTITSETTWEQP 662
           E IW H +KN+ G S  WN +     +E+P
Sbjct: 815 ERIWAHGLKNKHGKSSLWNFVLQHQDFEKP 844


>AF099923-3|AAN63403.1|  784|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 8,
           isoform c protein.
          Length = 784

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 585 WHEVKNQDGSSYYWNTITSETTWEQP 662
           W + K+ DG++YY + +   TT+  P
Sbjct: 59  WEQAKDNDGNTYYIDHLNRTTTYTDP 84


>AF099923-2|AAM48544.1|  814|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 8,
           isoform a protein.
          Length = 814

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 585 WHEVKNQDGSSYYWNTITSETTWEQP 662
           W + K+ DG++YY + +   TT+  P
Sbjct: 59  WEQAKDNDGNTYYIDHLNRTTTYTDP 84


>AF099923-1|AAM48545.1|  853|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 8,
           isoform b protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 585 WHEVKNQDGSSYYWNTITSETTWEQP 662
           W + K+ DG++YY + +   TT+  P
Sbjct: 98  WEQAKDNDGNTYYIDHLNRTTTYTDP 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,961,358
Number of Sequences: 27780
Number of extensions: 355090
Number of successful extensions: 1208
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3443371140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)