Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_D20
(1311 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0299 - 17051570-17052474,17053542-17053755 38 0.013
03_05_0067 - 20460206-20460703,20461255-20461530 36 0.053
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 32 0.87
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.5
03_02_0122 - 5742530-5743705 31 2.7
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 30 4.6
12_01_0292 + 2193309-2193338,2193565-2193640,2193744-2195203,219... 29 6.1
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 29 6.1
10_08_0161 + 15312986-15313160,15313250-15313557,15313676-153137... 29 6.1
06_02_0175 - 12624608-12625297 29 6.1
06_01_0178 + 1386981-1387505 29 6.1
06_03_0790 - 24636805-24637770 29 8.1
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 25 9.3
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 38.3 bits (85), Expect = 0.013
Identities = 25/79 (31%), Positives = 27/79 (34%)
Frame = -2
Query: 1274 PPXPPPPXFXFXKTXFFXXXXXXXXPXXFFFFXXXPPPXXXXXPPPPPXXFFFXXXPXXX 1095
PP PPPP F F + P F F PP PPPPP F P
Sbjct: 252 PPSPPPPAFPFPLPPW------PWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLP 305
Query: 1094 XFFFXXXPPXXFXFXXPPP 1038
PP + PPP
Sbjct: 306 P--LPHFPPLPSFYPSPPP 322
Score = 37.9 bits (84), Expect = 0.018
Identities = 24/69 (34%), Positives = 26/69 (37%)
Frame = -2
Query: 1274 PPXPPPPXFXFXKTXFFXXXXXXXXPXXFFFFXXXPPPXXXXXPPPPPXXFFFXXXPXXX 1095
PP PPPP F F F P F+ PPP PPPPP F + P
Sbjct: 289 PPPPPPPAFPFP---FPQLPPLPHFPPLPSFYPSPPPPPP--PPPPPPPSFPWPFPPLAP 343
Query: 1094 XFFFXXXPP 1068
F PP
Sbjct: 344 LFPPYPSPP 352
Score = 32.3 bits (70), Expect = 0.87
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = -2
Query: 464 PFFSPXXXFPXPPPPPXXXKKTXXXXXXXXXXXPPXXXFFXFXXXXPPPPXGRXP 300
P FSP P PPPPP PP F+ PPPP P
Sbjct: 282 PIFSP----PSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPP 332
Score = 31.9 bits (69), Expect = 1.2
Identities = 23/79 (29%), Positives = 25/79 (31%)
Frame = -2
Query: 1274 PPXPPPPXFXFXKTXFFXXXXXXXXPXXFFFFXXXPPPXXXXXPPPPPXXFFFXXXPXXX 1095
PP P PP +F P F PP P PPP F F P
Sbjct: 210 PPWPWPPIPFCTPRPWFPPIPFLTPPPPPFLPFPLPPIPFLTPPSPPPPAFPFPLPP--- 266
Query: 1094 XFFFXXXPPXXFXFXXPPP 1038
+ PP F F PP
Sbjct: 267 ---WPWAPPPAFPFPHLPP 282
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = -2
Query: 767 FXXXPPPXPPXXXXXXXXXXXIFXXXSPPPXXNPLFPXXGGFXPXPP-PFFXXXXLFFLG 591
F P P P IF SPPP P FP F PP P F F+
Sbjct: 262 FPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFP--FPQLPPLPHFPPLPSFYPS 319
Query: 590 KXXXPXKKTLXPP 552
P PP
Sbjct: 320 PPPPPPPPPPPPP 332
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 36.3 bits (80), Expect = 0.053
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -2
Query: 1169 PPPXXXXXPPPPPXXFFFXXXPXXXXFFFXXXPPXXFXFXXPPP 1038
PPP PPPPP F P +F PP PPP
Sbjct: 6 PPPQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQPPPP 49
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -2
Query: 1169 PPPXXXXXPPPPPXXFFFXXXPXXXXFFFXXXPPXXFXFXXPPP 1038
PPP PPPP +F P +F P + PPP
Sbjct: 5 PPPPQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQPPP 48
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 32.3 bits (70), Expect = 0.87
Identities = 28/117 (23%), Positives = 31/117 (26%)
Frame = -2
Query: 752 PPXPPXXXXXXXXXXXIFXXXSPPPXXNPLFPXXGGFXPXPPPFFXXXXLFFLGKXXXPX 573
PP PP S PP P P G F P P F + P
Sbjct: 430 PPPPPEHPPPPESTSPPPPPTSDPPPVPPPPPTTGSFMPIPSAPFAGLPVPAGPMTAVPY 489
Query: 572 KKTLXPPPRGVFFFXXXXXXXXXXXXXXXXXXXXGXPFFSPXXXFPXPPPPPXXXKK 402
PP G PF+ P P PPPPP +K
Sbjct: 490 NSYPVFPPMNYPMVNIPPPFPSAPNTPPGFQGLAG-PFYGPPYPAPPPPPPPPMNRK 545
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -2
Query: 464 PFFSPXXXFPXPPPPPXXXKKTXXXXXXXXXXXPPXXXFFXFXXXXPPPP 315
P FSP P PPPPP PP PPPP
Sbjct: 559 PAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPP 608
Score = 30.7 bits (66), Expect = 2.7
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -3
Query: 754 PPPXPPXXXXXXXXXKXFFXXXPPPLXXTPFSPXLXXXXPXPPP 623
PPP PP + PPP P P P PPP
Sbjct: 563 PPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPP 606
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -2
Query: 437 PXPPPPPXXXKKTXXXXXXXXXXXPPXXXFFXFXXXXPPPPXGRXP 300
P PPPPP K PP + PPPP P
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPP 593
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -2
Query: 452 PXXXFPXPPPPPXXXKKTXXXXXXXXXXXPPXXXFFXFXXXXPPPPXGRXPPXQ 291
P FP PPP PP F PPPP G PP Q
Sbjct: 14 PQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQ 67
Score = 30.7 bits (66), Expect = 2.7
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = -3
Query: 754 PPPXPPXXXXXXXXXKXFFXXXPPPLXXTPFSPXLXXXXPXPPP 623
PPP PP + F PP P P + P PPP
Sbjct: 54 PPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPP 97
>03_02_0122 - 5742530-5743705
Length = 391
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Frame = +1
Query: 1045 GXXXKKXXGGXXXKKKXXXXGXXKKKXXXGGGGGXKXKXGGGXXXKKKK--XWGXXXXXX 1218
G K G K + +K+ G GGG K + GG KKK G
Sbjct: 78 GKLDGKPAGNYLEKAEEYLHQYGRKEGSAGSGGGGKYQDEGGEGKYKKKPGHGGGRYEEE 137
Query: 1219 XKKXXVXXXKXXGGGGXGG 1275
++ GGGG GG
Sbjct: 138 EEEDYKKKPTSGGGGGYGG 156
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 29.9 bits (64), Expect = 4.6
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Frame = -2
Query: 755 PPPXPPXXXXXXXXXXXIFXXXSP--PPXXNP----LFPXXGGFXPXPPP 624
PPP P +F SP P NP +P G F P PPP
Sbjct: 29 PPPPPQQQQQEVAPNRYVFAAASPYPPQYPNPNLPQYYPQYGNFYPPPPP 78
>12_01_0292 + 2193309-2193338,2193565-2193640,2193744-2195203,
2195479-2195505,2195794-2196024,2196523-2196692,
2197278-2197421,2198036-2198083,2198503-2198566
Length = 749
Score = 29.5 bits (63), Expect = 6.1
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 1120 KXXXGGGGGXKXKXGGGXXXKKKKXWGXXXXXXXKKXXVXXXKXXGGGGXGG 1275
K GGGGG GGG K G GGGG GG
Sbjct: 288 KQNQGGGGGNGKNGGGGGQPNNAKGGGAPNGGGNHPAQGKKGGGGGGGGQGG 339
>11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Frame = -2
Query: 1169 PPPXXXXXPPPPP---XXFFFXXXPXXXXFFFXXXPPXXFXFXXPPPXXXGGXF 1017
PP PPPPP F P FF PP F P GG F
Sbjct: 45 PPQAAVAAPPPPPQVIRVFAAAPPPPPAAFFAAVPPPPPPPFEYYPAVGGGGGF 98
>10_08_0161 + 15312986-15313160,15313250-15313557,15313676-15313754,
15313856-15314373
Length = 359
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 1057 KKXXGGXXXKKKXXXXGXXKKKXXXGGGGGXKXKXGGGXXXKKKK 1191
KK G KK G KK GGGGG K GG K K
Sbjct: 231 KKDGAGGGDKKDGG--GGDKKDKKEGGGGGGDKKDAGGEKTDKDK 273
>06_02_0175 - 12624608-12625297
Length = 229
Score = 29.5 bits (63), Expect = 6.1
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +1
Query: 1132 GGGGGXKXKXGGGXXXKKKKXWGXXXXXXXKKXXVXXXKXXGGGGXG 1272
GGGGG GGG ++ WG K K GGGG G
Sbjct: 110 GGGGGGGGGGGGGGGGGRRCWWGCGNGRRRHK----GGKEGGGGGEG 152
>06_01_0178 + 1386981-1387505
Length = 174
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 297 GGXTTXXGGGGXXXKXKKXXXGGXXXXXXXXXXRGFFXXXGGGGGXGKXXXGG 455
GG GGGG K K GG G GG GG G GG
Sbjct: 43 GGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGHGGAGGGG 95
Score = 29.1 bits (62), Expect = 8.1
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = +1
Query: 1039 GGGXXXKKXXGGXXXKKKXXXXGXXKKKXXXGGGGGXKXKXGGGXXXKKKKXWGXXXXXX 1218
GGG GG K G GGGGG K + GG G
Sbjct: 42 GGGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGHGGAGGGGGGGGGK 101
Query: 1219 XKKXXVXXXKXXGG-GGXGG 1275
+K GG GG GG
Sbjct: 102 GRKGGRGGDGGSGGAGGRGG 121
>06_03_0790 - 24636805-24637770
Length = 321
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 297 GGXTTXXGGGGXXXKXKKXXXGGXXXXXXXXXXRGFFXXXGGGGGXGKXXXGG 455
GG GGGG GG RG GGGGG G GG
Sbjct: 88 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGG 140
>02_04_0567 - 23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 24.6 bits (51), Expect(2) = 9.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 1169 PPPXXXXXPPPPP 1131
PPP PPPPP
Sbjct: 44 PPPPPPPPPPPPP 56
Score = 22.6 bits (46), Expect(2) = 9.3
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -2
Query: 1301 FFFFXXXXXPPXPPPP 1254
F F PP PPPP
Sbjct: 33 FTFLCPPPPPPPPPPP 48
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.151 0.506
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,151,816
Number of Sequences: 37544
Number of extensions: 625029
Number of successful extensions: 3477
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3053
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4097157504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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