Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_D20
         (1311 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3444|AAF51657.1|   98|Drosophila melanogaster CG11458-P...    34   0.37 
AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    32   1.5  
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    32   1.5  
BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p pro...    30   6.1  

>AE014296-3444|AAF51657.1|   98|Drosophila melanogaster CG11458-PA
            protein.
          Length = 98

 Score = 34.3 bits (75), Expect = 0.37
 Identities = 18/44 (40%), Positives = 18/44 (40%)
 Frame = +1

Query: 1039 GGGXXXKKXXGGXXXKKKXXXXGXXKKKXXXGGGGGXKXKXGGG 1170
            GGG   K   GG    K     G   K    GGGGG   K GGG
Sbjct: 53   GGGGGGKHGGGGGGGGKHGGGNGGGGKHGGGGGGGGGGGKHGGG 96


>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p protein.
          Length = 993

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = -2

Query: 1169 PPPXXXXXPPPPPXXFFFXXXPXXXXFFFXXXPPXXFXFXXPPP 1038
            PPP     PPPPP    +   P      +   PP    +  PPP
Sbjct: 438  PPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPP 481



 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = -2

Query: 1169 PPPXXXXXPPPPPXXFFFXXXPXXXXFFFXXXPPXXFXFXXPPP 1038
            PPP     PPPPP    +   P     +    PP       PPP
Sbjct: 449  PPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPP 492


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
            protein.
          Length = 993

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = -2

Query: 1169 PPPXXXXXPPPPPXXFFFXXXPXXXXFFFXXXPPXXFXFXXPPP 1038
            PPP     PPPPP    +   P      +   PP    +  PPP
Sbjct: 438  PPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPP 481



 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = -2

Query: 1169 PPPXXXXXPPPPPXXFFFXXXPXXXXFFFXXXPPXXFXFXXPPP 1038
            PPP     PPPPP    +   P     +    PP       PPP
Sbjct: 449  PPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPP 492


>BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p
           protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 17/49 (34%), Positives = 18/49 (36%)
 Frame = +3

Query: 318 GGGGXXXKXKKXXXGGXXXXXXXXXXRGFFXXXGGGGGXGKXXXGGEKR 464
           GGGG      +   G           RG F   GGGGG G    GG  R
Sbjct: 32  GGGGFGGGRGRGGGGDRGGRGGFGGGRGAFGGRGGGGGRGGGGRGGGGR 80


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.151    0.506 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,414,547
Number of Sequences: 53049
Number of extensions: 864178
Number of successful extensions: 3869
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3347
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7110213645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)