Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_D20
(1311 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 27 0.46
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 27 0.46
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 27 0.46
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 0.55
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 4.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 4.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.5
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 7.3
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 7.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 9.6
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.5 bits (58), Expect(2) = 0.46
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 686 PPPXXNPLFPXXGGFXPXPPPFFXXXXLFFLGKXXXPXKKTLXPPPRG 543
PPP +P P G P PPP G P + PPP G
Sbjct: 262 PPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Score = 24.2 bits (50), Expect(2) = 0.46
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -2
Query: 452 PXXXFPXPPPPPXXXKKTXXXXXXXXXXXPPXXXFFXFXXXXPPPP 315
P P PPPPP T PP PPPP
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG----TGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.5 bits (58), Expect(2) = 0.46
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 686 PPPXXNPLFPXXGGFXPXPPPFFXXXXLFFLGKXXXPXKKTLXPPPRG 543
PPP +P P G P PPP G P + PPP G
Sbjct: 247 PPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Score = 24.2 bits (50), Expect(2) = 0.46
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -2
Query: 452 PXXXFPXPPPPPXXXKKTXXXXXXXXXXXPPXXXFFXFXXXXPPPP 315
P P PPPPP T PP PPPP
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG----TGSPPPPP 339
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.5 bits (58), Expect(2) = 0.46
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 686 PPPXXNPLFPXXGGFXPXPPPFFXXXXLFFLGKXXXPXKKTLXPPPRG 543
PPP +P P G P PPP G P + PPP G
Sbjct: 241 PPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Score = 24.2 bits (50), Expect(2) = 0.46
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -2
Query: 452 PXXXFPXPPPPPXXXKKTXXXXXXXXXXXPPXXXFFXFXXXXPPPP 315
P P PPPPP T PP PPPP
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG----TGSPPPPP 333
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect(2) = 0.55
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = -2
Query: 437 PXPPPPPXXXKKTXXXXXXXXXXXPPXXXFFXFXXXXPPPP 315
P PPPPP + PP F PPPP
Sbjct: 1354 PVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
Score = 22.2 bits (45), Expect(2) = 0.55
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 455 SPXXXFPXPPPPP 417
SP P PPPPP
Sbjct: 1335 SPSPPPPPPPPPP 1347
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 1169 PPPXXXXXPPPPPXXFFFXXXPXXXXFFFXXXPPXXFXFXXPPPXXXG 1026
PPP PPPP F P PP F PPP G
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -2
Query: 1169 PPPXXXXXPPPPPXXFFFXXXPXXXXFFFXXXPPXXFXFXXPPPXXXGG 1023
PPP PPPPP F P PP PPP G
Sbjct: 76 PPPGPGGIPPPPP--MFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = -2
Query: 755 PPPXPPXXXXXXXXXXXIFXXXSPPPXXNPL-FPXXGGFXPXPPP 624
PPP PP PPP P+ P G P PPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP 653
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = -2
Query: 755 PPPXPPXXXXXXXXXXXIFXXXSPPPXXNPL-FPXXGGFXPXPPP 624
PPP PP PPP P+ P G P PPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP 479
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = -2
Query: 755 PPPXPPXXXXXXXXXXXIFXXXSP---PPXXNPLFPXXGGFXPXPPP 624
PPP PP F S PP PL P G P PPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = -2
Query: 755 PPPXPPXXXXXXXXXXXIFXXXSP---PPXXNPLFPXXGGFXPXPPP 624
PPP PP F S PP PL P G P PPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 755 PPPXPPXXXXXXXXXXXIFXXXSPPPXXNPLFPXXGGFXPXPPP 624
PPP PP PP P P GG P PPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGP--PGMGGMPPPPPP 339
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -2
Query: 755 PPPXPPXXXXXXXXXXXIFXXXSPPPXXNPLFPXXGGFXPXPPP 624
PPP PP I PPP L P GG P PPP
Sbjct: 726 PPPPPPPGGLPP-----ITGGPPPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -2
Query: 755 PPPXPPXXXXXXXXXXXIFXXXSPPPXXNPLFPXXGGFXPXPPP 624
PPP PP I PPP L P GG P PPP
Sbjct: 726 PPPPPPPGGLPP-----ITGGPPPPPPPGGLPPISGGPPPPPPP 764
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 755 PPPXPPXXXXXXXXXXXIFXXXSPPPXXNPLFPXXGGFXPXPPP 624
PPP PP PP P P GG P PPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGP--PGMGGMPPPPPP 349
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -2
Query: 755 PPPXPPXXXXXXXXXXXIFXXXSPPPXXNPLFPXXGGFXPXPPP 624
PPP PP I PPP L P GG P PPP
Sbjct: 309 PPPPPPPGGLPP-----ITGGPPPPPPPGGLPPISGGPPPPPPP 347
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +3
Query: 297 GGXTTXXGGGGXXXKXKKXXXGGXXXXXXXXXXRGFFXXXGGGGGXGKXXXGG 455
GG GGGG + GG RG F GGGGG + GG
Sbjct: 210 GGGDRYGGGGGDRYGGDRYGGGGGRRGSPDR--RGGFRSGGGGGGYMRSGGGG 260
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +3
Query: 291 LXGGXTTXXGGGGXXXKXKKXXXGGXXXXXXXXXXRGFFXXXGGGGGXGKXXXGG 455
L G GGGG GG G GGGGG G+ GG
Sbjct: 92 LVGSLIGGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGG 146
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +3
Query: 297 GGXTTXXGGGGXXXKXKKXXXGGXXXXXXXXXXRGFFXXXGGGGGXGKXXXGG 455
GG GGGG + GG RG GGGGG G+ GG
Sbjct: 78 GGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRG----GGGGGGGGRGGGGG 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.151 0.506
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,558,027
Number of Sequences: 27780
Number of extensions: 317855
Number of successful extensions: 1157
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3663150656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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