Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_D19
         (1279 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   3.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   7.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   7.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   7.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 687 SCGNGASTVSTPSRDSEDL 631
           SCG G + ++TP  DS+ +
Sbjct: 369 SCGGGPTILTTPGLDSDGI 387


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +2

Query: 221 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 400
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 401 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 526
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +2

Query: 221 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 400
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 401 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 526
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +2

Query: 221 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 400
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 401 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 526
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVAINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 275,289
Number of Sequences: 438
Number of extensions: 5296
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43822995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)