Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_D18
         (1360 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.23 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   2.5  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 29.5 bits (63), Expect = 0.23
 Identities = 15/44 (34%), Positives = 17/44 (38%)
 Frame = +1

Query: 850 PGGGGGPXPXPXXGFPXGGGGXXXXXXXXEKTPPXXKXGGXXXG 981
           PGGGGG    P  G   GGGG        ++       GG   G
Sbjct: 212 PGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGG 255


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.2 bits (45), Expect(2) = 2.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 896 GXPXXGXGXGPPPPP 852
           G    G   GPPPPP
Sbjct: 520 GRDLTGGPLGPPPPP 534



 Score = 21.8 bits (44), Expect(2) = 2.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 875 GXGPPPPPG 849
           G  PPPPPG
Sbjct: 529 GPPPPPPPG 537


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,785
Number of Sequences: 2352
Number of extensions: 14813
Number of successful extensions: 27
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 156462075
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)