Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_D13
(1306 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018152-1|AAH18152.1| 204|Homo sapiens PNO1 protein protein. 261 3e-69
BC008304-1|AAH08304.1| 252|Homo sapiens partner of NOB1 homolog... 261 3e-69
AK223118-1|BAD96838.1| 248|Homo sapiens putatative 28 kDa prote... 261 3e-69
AF349314-1|AAK29434.1| 252|Homo sapiens RNA-binding protein LOC... 261 3e-69
AF164799-1|AAF80763.1| 252|Homo sapiens putatative 28 kDa prote... 261 3e-69
AC017083-2|AAY14714.1| 252|Homo sapiens unknown protein. 261 3e-69
BC090853-1|AAH90853.1| 289|Homo sapiens HOXD8 protein protein. 31 9.2
BC038709-1|AAH38709.1| 289|Homo sapiens homeobox D8 protein. 31 9.2
AY014304-1|AAG42152.1| 290|Homo sapiens HOXD8 protein. 31 9.2
>BC018152-1|AAH18152.1| 204|Homo sapiens PNO1 protein protein.
Length = 204
Score = 261 bits (640), Expect = 3e-69
Identities = 124/180 (68%), Positives = 147/180 (81%)
Frame = +1
Query: 352 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 531
K RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+ ETKD++ L
Sbjct: 24 KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 83
Query: 532 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 711
KAADFVKAFI GF+V F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 84 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 143
Query: 712 FTIENVTKTRIVLADSKIHILGSYQNIALARRAICNLIMGSPPSKVYGNLRNVANRVAER 891
FTIENVT+TRIVLAD K+HILGS+QNI +AR AICNLI+G+PPSKVYGN+R VA+R A+R
Sbjct: 144 FTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 203
>BC008304-1|AAH08304.1| 252|Homo sapiens partner of NOB1 homolog
(S. cerevisiae) protein.
Length = 252
Score = 261 bits (640), Expect = 3e-69
Identities = 124/180 (68%), Positives = 147/180 (81%)
Frame = +1
Query: 352 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 531
K RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+ ETKD++ L
Sbjct: 72 KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 131
Query: 532 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 711
KAADFVKAFI GF+V F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 132 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 191
Query: 712 FTIENVTKTRIVLADSKIHILGSYQNIALARRAICNLIMGSPPSKVYGNLRNVANRVAER 891
FTIENVT+TRIVLAD K+HILGS+QNI +AR AICNLI+G+PPSKVYGN+R VA+R A+R
Sbjct: 192 FTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 251
>AK223118-1|BAD96838.1| 248|Homo sapiens putatative 28 kDa protein
variant protein.
Length = 248
Score = 261 bits (640), Expect = 3e-69
Identities = 124/180 (68%), Positives = 147/180 (81%)
Frame = +1
Query: 352 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 531
K RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+ ETKD++ L
Sbjct: 68 KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 127
Query: 532 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 711
KAADFVKAFI GF+V F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 128 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 187
Query: 712 FTIENVTKTRIVLADSKIHILGSYQNIALARRAICNLIMGSPPSKVYGNLRNVANRVAER 891
FTIENVT+TRIVLAD K+HILGS+QNI +AR AICNLI+G+PPSKVYGN+R VA+R A+R
Sbjct: 188 FTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 247
>AF349314-1|AAK29434.1| 252|Homo sapiens RNA-binding protein
LOC56902 protein.
Length = 252
Score = 261 bits (640), Expect = 3e-69
Identities = 124/180 (68%), Positives = 147/180 (81%)
Frame = +1
Query: 352 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 531
K RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+ ETKD++ L
Sbjct: 72 KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 131
Query: 532 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 711
KAADFVKAFI GF+V F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 132 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 191
Query: 712 FTIENVTKTRIVLADSKIHILGSYQNIALARRAICNLIMGSPPSKVYGNLRNVANRVAER 891
FTIENVT+TRIVLAD K+HILGS+QNI +AR AICNLI+G+PPSKVYGN+R VA+R A+R
Sbjct: 192 FTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 251
>AF164799-1|AAF80763.1| 252|Homo sapiens putatative 28 kDa protein
protein.
Length = 252
Score = 261 bits (640), Expect = 3e-69
Identities = 124/180 (68%), Positives = 147/180 (81%)
Frame = +1
Query: 352 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 531
K RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+ ETKD++ L
Sbjct: 72 KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 131
Query: 532 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 711
KAADFVKAFI GF+V F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 132 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 191
Query: 712 FTIENVTKTRIVLADSKIHILGSYQNIALARRAICNLIMGSPPSKVYGNLRNVANRVAER 891
FTIENVT+TRIVLAD K+HILGS+QNI +AR AICNLI+G+PPSKVYGN+R VA+R A+R
Sbjct: 192 FTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 251
>AC017083-2|AAY14714.1| 252|Homo sapiens unknown protein.
Length = 252
Score = 261 bits (640), Expect = 3e-69
Identities = 124/180 (68%), Positives = 147/180 (81%)
Frame = +1
Query: 352 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 531
K RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+ ETKD++ L
Sbjct: 72 KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 131
Query: 532 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 711
KAADFVKAFI GF+V F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 132 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 191
Query: 712 FTIENVTKTRIVLADSKIHILGSYQNIALARRAICNLIMGSPPSKVYGNLRNVANRVAER 891
FTIENVT+TRIVLAD K+HILGS+QNI +AR AICNLI+G+PPSKVYGN+R VA+R A+R
Sbjct: 192 FTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 251
>BC090853-1|AAH90853.1| 289|Homo sapiens HOXD8 protein protein.
Length = 289
Score = 31.1 bits (67), Expect = 9.2
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -1
Query: 1270 PXPPXXGXGXGGXGGXXXX---PXXXGXAVXXXXXPPPPPXP 1154
P PP G G GG G P A PPPPP P
Sbjct: 74 PSPPPSGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPHP 115
>BC038709-1|AAH38709.1| 289|Homo sapiens homeobox D8 protein.
Length = 289
Score = 31.1 bits (67), Expect = 9.2
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -1
Query: 1270 PXPPXXGXGXGGXGGXXXX---PXXXGXAVXXXXXPPPPPXP 1154
P PP G G GG G P A PPPPP P
Sbjct: 74 PSPPPSGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPHP 115
>AY014304-1|AAG42152.1| 290|Homo sapiens HOXD8 protein.
Length = 290
Score = 31.1 bits (67), Expect = 9.2
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -1
Query: 1270 PXPPXXGXGXGGXGGXXXX---PXXXGXAVXXXXXPPPPPXP 1154
P PP G G GG G P A PPPPP P
Sbjct: 74 PSPPPSGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPHP 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,526,460
Number of Sequences: 237096
Number of extensions: 3097416
Number of successful extensions: 11084
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10249
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18825810660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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