Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_D13
(1306 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99278-2|CAB16491.1| 277|Caenorhabditis elegans Hypothetical pr... 229 4e-60
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.77
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.77
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 3.1
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 3.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 3.1
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 4.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 5.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 5.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 7.2
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 7.2
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 29 9.5
U88314-4|AAK71360.1| 494|Caenorhabditis elegans Let-23 fertilit... 29 9.5
U88314-3|AAK71361.1| 394|Caenorhabditis elegans Let-23 fertilit... 29 9.5
U88314-2|AAF99884.2| 461|Caenorhabditis elegans Let-23 fertilit... 29 9.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 9.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 9.5
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 29 9.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 9.5
AF045613-1|AAC38962.1| 461|Caenorhabditis elegans inositol tris... 29 9.5
AF045612-1|AAC38961.1| 394|Caenorhabditis elegans inositol tris... 29 9.5
AF045611-1|AAC38960.1| 494|Caenorhabditis elegans inositol tris... 29 9.5
>Z99278-2|CAB16491.1| 277|Caenorhabditis elegans Hypothetical
protein Y53C12B.2 protein.
Length = 277
Score = 229 bits (559), Expect = 4e-60
Identities = 112/178 (62%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Frame = +1
Query: 364 RKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQKAAD 543
R V VP HRYTPLK++W+ IFTPIV++L LQVRFN K R VEI+ + +D +LQKA D
Sbjct: 100 RVVPVPKHRYTPLKDNWVNIFTPIVKNLGLQVRFNLKKRQVEIRNPVDREDTTDLQKATD 159
Query: 544 FVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVK-TLNGDHLSRAIGRLAGKAGRTKFTI 720
FV+AFI GFEV F+E+FEV DVK +L GDH+SRAIGR+AGK GRTK I
Sbjct: 160 FVRAFILGFEVNDAIALIRLDHLFLETFEVADVKHSLKGDHVSRAIGRIAGKDGRTKLVI 219
Query: 721 ENVTKTRIVLADSKIHILGSYQNIALARRAICNLIMGSPPSKVYGNLRNVANRVAERI 894
EN TKTRIV+A++KIHILG+YQN+ LAR A+C+LI+GS PSKVYG+LRN+A+R AER+
Sbjct: 220 ENTTKTRIVVANTKIHILGAYQNLKLARNAVCSLILGSNPSKVYGSLRNMASRGAERL 277
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 1149 FXGXGGGGGFXXXXTAXPXXXGXXXXPPXPPXPXPXXGGXGF 1274
+ G GGGG+ A P PP PP P P G G+
Sbjct: 286 YAGSSGGGGYSAPAAAPPPPP----PPPPPPAPAPVSSGGGY 323
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -1
Query: 1252 GXGXGGXGGXXXXPXXXGXAVXXXXXPPPPPXP 1154
G G G GG G + PPPPP P
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 1149 FXGXGGGGGFXXXXTAXPXXXGXXXXPPXPPXPXPXXGGXGF 1274
+ G GGGG+ A P PP PP P P G G+
Sbjct: 286 YAGSSGGGGYSAPAAAPPPPP----PPPPPPAPAPVSSGGGY 323
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -1
Query: 1252 GXGXGGXGGXXXXPXXXGXAVXXXXXPPPPPXP 1154
G G G GG G + PPPPP P
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = +1
Query: 1147 FXPVXGGGGXXXLXXPPPPGXGXXFXPLP--FPPXXXPXXGGXXSXXGXXXPXG 1302
+ P GG G PPPPG + P P FPP P G + G G
Sbjct: 423 YGPPQGGPGGFG---PPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARG 473
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like (grd
related) protein16, isoform b protein.
Length = 453
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +3
Query: 1161 GGGGGFXXXXTAXPXXXGXXXXPPXPPXPXPXXGGXGF 1274
GGGGG A P PP PP P P GG G+
Sbjct: 50 GGGGGSYAAAPALP--------PPPPPPPAPIGGGAGY 79
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like (grd
related) protein16, isoform a protein.
Length = 393
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +3
Query: 1161 GGGGGFXXXXTAXPXXXGXXXXPPXPPXPXPXXGGXGF 1274
GGGGG A P PP PP P P GG G+
Sbjct: 50 GGGGGSYAAAPALP--------PPPPPPPAPIGGGAGY 79
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -3
Query: 1265 PPXXGXXXGGXGRGXXXXPXPGGGGXXXXKXPPPP 1161
PP GG G G GG G + PPPP
Sbjct: 181 PPSNDFGPGGGGGGMGGGGGSGGSGGGSGRFPPPP 215
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 1162 GGGGXXXLXXPPPPGXGXXFXPLPFPP 1242
GGG + PPP G G P P PP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFMPPPPPPP 680
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 1162 GGGGXXXLXXP-PPPGXGXXFXPLPFPPXXXP 1254
G GG + P PPPG F P P PP P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 1162 GGGGXXXLXXPPPPGXGXXFXPLPFPP 1242
GGG + PPP G G P P PP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFMPPPPPPP 680
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 1162 GGGGXXXLXXP-PPPGXGXXFXPLPFPPXXXP 1254
G GG + P PPPG F P P PP P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMP 683
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 1253 GXXXGGXGRGXXXXPXPGGGGXXXXKXPPPP 1161
G GG G G PGGGG PP P
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAP 645
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisomerase
III protein.
Length = 759
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 1253 GXXXGGXGRGXXXXPXPGGGGXXXXKXPPPP 1161
G GG G G PGGGG PP P
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAP 645
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 199 KTMKLKNIKRKATDDTGDGMEVEEPTI 279
KT K K+ K +DD GD M+V+ P +
Sbjct: 1307 KTTKRKSGGSKISDDEGDSMDVKSPAV 1333
>U88314-4|AAK71360.1| 494|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform a protein.
Length = 494
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 436 VEHLLLQVRFNTKTRNVEIKVGPET---KDIANLQKAADFVKAFI 561
+E LL Q TKT ++IK+G T +++N +K AD + +
Sbjct: 259 IEDLLQQFHDPTKTAIMDIKIGTRTFLESEVSNTKKRADLYEKMV 303
>U88314-3|AAK71361.1| 394|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform b protein.
Length = 394
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 436 VEHLLLQVRFNTKTRNVEIKVGPET---KDIANLQKAADFVKAFI 561
+E LL Q TKT ++IK+G T +++N +K AD + +
Sbjct: 159 IEDLLQQFHDPTKTAIMDIKIGTRTFLESEVSNTKKRADLYEKMV 203
>U88314-2|AAF99884.2| 461|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform c protein.
Length = 461
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 436 VEHLLLQVRFNTKTRNVEIKVGPET---KDIANLQKAADFVKAFI 561
+E LL Q TKT ++IK+G T +++N +K AD + +
Sbjct: 226 IEDLLQQFHDPTKTAIMDIKIGTRTFLESEVSNTKKRADLYEKMV 270
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 1270 PXPPXXGXGXGGXGGXXXXPXXXGXAVXXXXXPPPPPXP 1154
P PP G GG P G PPPPP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 1270 PXPPXXGXGXGGXGGXXXXPXXXGXAVXXXXXPPPPPXP 1154
P PP G GG P G PPPPP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 199 KTMKLKNIKRKATDDTGDGMEVEEPTI 279
KT K K+ K +DD GD M+V+ P +
Sbjct: 1307 KTTKRKSGGSKISDDEGDSMDVKSPAV 1333
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 1270 PXPPXXGXGXGGXGGXXXXPXXXGXAVXXXXXPPPPPXP 1154
P PP G GG P G PPPPP P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
>AF045613-1|AAC38962.1| 461|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 3 protein.
Length = 461
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 436 VEHLLLQVRFNTKTRNVEIKVGPET---KDIANLQKAADFVKAFI 561
+E LL Q TKT ++IK+G T +++N +K AD + +
Sbjct: 226 IEDLLQQFHDPTKTAIMDIKIGTRTFLESEVSNTKKRADLYEKMV 270
>AF045612-1|AAC38961.1| 394|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 2 protein.
Length = 394
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 436 VEHLLLQVRFNTKTRNVEIKVGPET---KDIANLQKAADFVKAFI 561
+E LL Q TKT ++IK+G T +++N +K AD + +
Sbjct: 159 IEDLLQQFHDPTKTAIMDIKIGTRTFLESEVSNTKKRADLYEKMV 203
>AF045611-1|AAC38960.1| 494|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 1 protein.
Length = 494
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 436 VEHLLLQVRFNTKTRNVEIKVGPET---KDIANLQKAADFVKAFI 561
+E LL Q TKT ++IK+G T +++N +K AD + +
Sbjct: 259 IEDLLQQFHDPTKTAIMDIKIGTRTFLESEVSNTKKRADLYEKMV 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,602,691
Number of Sequences: 27780
Number of extensions: 468320
Number of successful extensions: 1976
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3642337300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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