Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_D12
(1304 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 118 7e-27
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 118 7e-27
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 109 6e-24
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 109 6e-24
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 109 6e-24
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 109 6e-24
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 109 6e-24
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 75 8e-14
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 68 2e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 48 1e-05
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 44 3e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 42 0.001
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 38 0.016
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 38 0.016
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.021
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 33 0.59
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 33 0.59
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 32 1.0
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 31 2.4
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 30 3.1
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 9.5
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 9.5
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 9.5
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 118 bits (285), Expect = 7e-27
Identities = 58/133 (43%), Positives = 79/133 (59%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXX 298
V ++ + ++K KI+ EGIP +QRL +AG+QLED SD I E+T+++
Sbjct: 15 VAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
Query: 299 XXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVME 478
Y+TP LAVL++YK+DENGKI RLR+EC CG GVFMA
Sbjct: 71 AKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHA 130
Query: 479 DRHYCGKCHSTMV 517
+RHYCG+CH T+V
Sbjct: 131 NRHYCGRCHDTLV 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 118 bits (285), Expect = 7e-27
Identities = 58/133 (43%), Positives = 79/133 (59%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXX 298
V ++ + ++K KI+ EGIP +QRL +AG+QLED SD I E+T+++
Sbjct: 15 VAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
Query: 299 XXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVME 478
Y+TP LAVL++YK+DENGKI RLR+EC CG GVFMA
Sbjct: 71 AKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHA 130
Query: 479 DRHYCGKCHSTMV 517
+RHYCG+CH T+V
Sbjct: 131 NRHYCGRCHDTLV 143
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 93 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 169 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 245 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 321 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 397 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 62.5 bits (145), Expect = 6e-10
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 211
VE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 473 VEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 93 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 169 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 245 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 321 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 397 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 473 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 549 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 625 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 701 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 777 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 93 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 169 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 245 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 321 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 397 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 473 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 549 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 625 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 701 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 107 bits (258), Expect = 1e-23
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK+STLHLV
Sbjct: 777 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 109 bits (261), Expect = 6e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 75.4 bits (177), Expect = 8e-14
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
+EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 17 IEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 67.7 bits (158), Expect = 2e-11
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = +2
Query: 110 PL*VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 280
P+ ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 174 PISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 38.3 bits (85), Expect = 0.012
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 110 PL*VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 277
P+ VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL L
Sbjct: 102 PITVEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTLRL 153
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 271
+ DT+ ++K I+ + IP + L F+GK+LED ++ DYNIQK ST+
Sbjct: 169 IHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIP 181
VE SDTIENVKAKIQDKEGIP
Sbjct: 17 VEASDTIENVKAKIQDKEGIP 37
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 41.9 bits (94), Expect = 0.001
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 277
V SDTI VK I + + R++ K LED TL+ YNIQ+ STL L
Sbjct: 189 VRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 37.9 bits (84), Expect = 0.016
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 128 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 277
SDTI ++K +I + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 215 SDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 37.9 bits (84), Expect = 0.016
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 101 RPSPL*VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLSDYNIQKESTL 271
R L SDT+ +VKAKI +K I PN Q+L+ L+ D TL D + + STL
Sbjct: 112 RTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGSTL 171
Query: 272 HL 277
L
Sbjct: 172 RL 173
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 37.5 bits (83), Expect = 0.021
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +2
Query: 128 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 271
SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 181 SDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.59
Identities = 13/53 (24%), Positives = 32/53 (60%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 277
++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 593 IQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.59
Identities = 13/53 (24%), Positives = 32/53 (60%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 277
++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 593 IQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 131 DTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 247
+++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 163 ESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/52 (25%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 271
++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I ++ +
Sbjct: 38 MKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 119 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 214
V ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 15 VAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -2
Query: 622 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 476
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -2
Query: 622 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 476
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -2
Query: 622 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 476
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,284,429
Number of Sequences: 27780
Number of extensions: 268564
Number of successful extensions: 771
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3642337300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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