Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_D11
         (1339 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0421 + 8306363-8306417,8307266-8307413,8308192-8308267           34   0.22 
02_05_0686 - 30900748-30902167,30903442-30904742                       34   0.29 
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42...    31   2.1  
02_04_0028 + 19027510-19027983,19028087-19028278,19028369-190285...    30   4.8  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   6.3  

>03_02_0421 + 8306363-8306417,8307266-8307413,8308192-8308267
          Length = 92

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
 Frame = +2

Query: 263 RKVEIDVMIPKLIREKAKQE---KCIEEVAQFEKCCKDASLLMVVKCRSPNAALKDCLSN 433
           R+  +   + + +R K KQ+   +C    +++ +C +  +  +V +CR     L DCL  
Sbjct: 8   RENHVKKKVEEALRSKMKQKALKECDFYCSKYAECARGRTFSVVWQCRKQAKELNDCLHQ 67

Query: 434 WYNN---EEFKK-ICTEEYLKERSE 496
           + N+   EE KK    E+  KE+++
Sbjct: 68  FTNDAVLEEMKKAYMVEQESKEKNQ 92


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 33.9 bits (74), Expect = 0.29
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = -3

Query: 1043 PPXXGKPXXPPXGXXNPXPPXRXXGXXXVXGXGXGXGGPXXXPPXPG 903
            PP  G P  PP     P PP +          G   GGP   PP  G
Sbjct: 339  PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385


>03_01_0049 +
           418957-419040,419599-419796,419918-420040,420172-420209,
           420334-420502,421115-424273,424367-424485,424915-425116
          Length = 1363

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +2

Query: 248 DDRRLRKVEIDVMIPKLIREKAKQEKCIE 334
           DD R  KVE++ +I K+  EK++ E+C+E
Sbjct: 690 DDLRCSKVEMESVISKIQAEKSQLEECLE 718


>02_04_0028 + 19027510-19027983,19028087-19028278,19028369-19028545,
            19029568-19029663,19030487-19030618,19030950-19031008,
            19031234-19031321,19031433-19031693
          Length = 492

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = -3

Query: 1043 PPXXGKPXXPPXGXXNPXPPXRXXGXXXVXGXGXGXGG 930
            PP   +P  PP     P PP R  G     G G G  G
Sbjct: 94   PPRPPRPPLPPRPPRPPLPPLREPGEGGGRGDGRGATG 131


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
 Frame = -3

Query: 1025 PXXPPXGXXNPXPPXRXXGXXXVXG-XGXGXGGPXXXPPXPGG 900
            P  PP     P PP    G     G  G G GGP   P  PGG
Sbjct: 351  PPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGP-PPPALPGG 392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,374,527
Number of Sequences: 37544
Number of extensions: 444414
Number of successful extensions: 1468
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4201914372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)