BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_D11
(1339 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052644-1|AAH52644.1| 106|Homo sapiens hypothetical protein MG... 120 2e-26
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 36 0.25
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 36 0.25
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 36 0.25
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 36 0.25
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 36 0.25
M13058-1|AAA98808.1| 166|Homo sapiens proline-rich protein 2 pr... 33 3.1
M13057-1|AAA98807.1| 166|Homo sapiens proline-rich protein 1 pr... 33 3.1
K03203-1|AAA60184.1| 166|Homo sapiens PRH1 protein. 33 3.1
K03202-1|AAA60183.1| 166|Homo sapiens PRH2 protein. 33 3.1
BX641094-1|CAE46044.1| 166|Homo sapiens hypothetical protein pr... 33 3.1
BC141916-1|AAI41917.1| 170|Homo sapiens PRH2 protein protein. 33 3.1
BC133676-1|AAI33677.1| 166|Homo sapiens proline-rich protein Ha... 33 3.1
BC128192-1|AAI28193.1| 171|Homo sapiens PRH1 protein protein. 33 3.1
BC095488-1|AAH95488.1| 166|Homo sapiens PRH2 protein protein. 33 3.1
BC064553-1|AAH64553.1| 187|Homo sapiens PRH1 protein protein. 33 3.1
K03205-1|AAA60186.1| 198|Homo sapiens PRB1 protein. 32 5.4
BC141917-1|AAI41918.1| 198|Homo sapiens PRB1 protein protein. 32 5.4
BC036785-1|AAH36785.1| 290|Homo sapiens chromosome 20 open read... 32 5.4
AL021578-12|CAC18107.1| 290|Homo sapiens chromosome 20 open rea... 32 5.4
AB017802-1|BAA76405.1| 290|Homo sapiens clg01 protein. 32 5.4
K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary ... 31 7.2
S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein. 31 9.5
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 31 9.5
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 31 9.5
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 31 9.5
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 31 9.5
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 31 9.5
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 31 9.5
>BC052644-1|AAH52644.1| 106|Homo sapiens hypothetical protein
MGC61571 protein.
Length = 106
Score = 120 bits (288), Expect = 2e-26
Identities = 55/99 (55%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
Frame = +2
Query: 242 DPDDRRLRKVEIDVMIPKLIREKAKQEKCIEEVAQFEKCCKDASLLMVVKCRSPNAALKD 421
DP D+ LR VE DV+IPK++REKAK E+C E+V F KCCK++ +LMVVKCR N+ALK+
Sbjct: 4 DPADQHLRHVEKDVLIPKIMREKAK-ERCSEQVQDFTKCCKNSGVLMVVKCRKENSALKE 62
Query: 422 CLSNWYNNEEFKKICTEEYLKERSEYRRTGV--KKAIRR 532
CL+ +YN+ F + C EYLKER E+R+TG+ KK +++
Sbjct: 63 CLTAYYNDPAFYEECKMEYLKEREEFRKTGIPTKKRLQK 101
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing factor
protein.
Length = 707
Score = 36.3 bits (80), Expect = 0.25
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPPXRXXGXXXVXGXGXGXGGPXXXP----PXPGGWP 894
PP G P PP P PP G G G GGP P PGG P
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGP 222
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 36.3 bits (80), Expect = 0.25
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPPXRXXGXXXVXGXGXGXGGPXXXP----PXPGGWP 894
PP G P PP P PP G G G GGP P PGG P
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGP 222
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 36.3 bits (80), Expect = 0.25
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPPXRXXGXXXVXGXGXGXGGPXXXP----PXPGGWP 894
PP G P PP P PP G G G GGP P PGG P
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGP 222
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 36.3 bits (80), Expect = 0.25
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPPXRXXGXXXVXGXGXGXGGPXXXP----PXPGGWP 894
PP G P PP P PP G G G GGP P PGG P
Sbjct: 96 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGP 149
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 36.3 bits (80), Expect = 0.25
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPPXRXXGXXXVXGXGXGXGGPXXXP----PXPGGWP 894
PP G P PP P PP G G G GGP P PGG P
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGP 222
>M13058-1|AAA98808.1| 166|Homo sapiens proline-rich protein 2
protein.
Length = 166
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPP-XRXXGXXXVXGXGXGXGGPXXXPPXPGG 900
PP GKP PP +P PP R G G G PP GG
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 133
>M13057-1|AAA98807.1| 166|Homo sapiens proline-rich protein 1
protein.
Length = 166
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPP-XRXXGXXXVXGXGXGXGGPXXXPPXPGG 900
PP GKP PP +P PP R G G G PP GG
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 133
>K03203-1|AAA60184.1| 166|Homo sapiens PRH1 protein.
Length = 166
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPP-XRXXGXXXVXGXGXGXGGPXXXPPXPGG 900
PP GKP PP +P PP R G G G PP GG
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 133
>K03202-1|AAA60183.1| 166|Homo sapiens PRH2 protein.
Length = 166
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPP-XRXXGXXXVXGXGXGXGGPXXXPPXPGG 900
PP GKP PP +P PP R G G G PP GG
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 133
>BX641094-1|CAE46044.1| 166|Homo sapiens hypothetical protein
protein.
Length = 166
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPP-XRXXGXXXVXGXGXGXGGPXXXPPXPGG 900
PP GKP PP +P PP R G G G PP GG
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 133
>BC141916-1|AAI41917.1| 170|Homo sapiens PRH2 protein protein.
Length = 170
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPP-XRXXGXXXVXGXGXGXGGPXXXPPXPGG 900
PP GKP PP +P PP R G G G PP GG
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 133
>BC133676-1|AAI33677.1| 166|Homo sapiens proline-rich protein HaeIII
subfamily 1 protein.
Length = 166
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPP-XRXXGXXXVXGXGXGXGGPXXXPPXPGG 900
PP GKP PP +P PP R G G G PP GG
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 133
>BC128192-1|AAI28193.1| 171|Homo sapiens PRH1 protein protein.
Length = 171
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPP-XRXXGXXXVXGXGXGXGGPXXXPPXPGG 900
PP GKP PP +P PP R G G G PP GG
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 133
>BC095488-1|AAH95488.1| 166|Homo sapiens PRH2 protein protein.
Length = 166
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPP-XRXXGXXXVXGXGXGXGGPXXXPPXPGG 900
PP GKP PP +P PP R G G G PP GG
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 133
>BC064553-1|AAH64553.1| 187|Homo sapiens PRH1 protein protein.
Length = 187
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 1043 PPXXGKPXXPPXGXXNPXPP-XRXXGXXXVXGXGXGXGGPXXXPPXPGG 900
PP GKP PP +P PP R G G G PP GG
Sbjct: 106 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 154
>K03205-1|AAA60186.1| 198|Homo sapiens PRB1 protein.
Length = 198
Score = 31.9 bits (69), Expect = 5.4
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Frame = +1
Query: 1147 PKXXPXXGGX-PXGLXXPXXPXKPPRXPXSXXXXRXXXXXPXXGXXXXPPGGXXXGGXPX 1323
P+ P GG P G P P KP P R P P GG G P
Sbjct: 57 PQGPPPQGGNKPQG---PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQ 113
Query: 1324 GGXXP 1338
GG P
Sbjct: 114 GGNKP 118
>BC141917-1|AAI41918.1| 198|Homo sapiens PRB1 protein protein.
Length = 198
Score = 31.9 bits (69), Expect = 5.4
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Frame = +1
Query: 1147 PKXXPXXGGX-PXGLXXPXXPXKPPRXPXSXXXXRXXXXXPXXGXXXXPPGGXXXGGXPX 1323
P+ P GG P G P P KP P R P P GG G P
Sbjct: 57 PQGPPPQGGNKPQG---PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQ 113
Query: 1324 GGXXP 1338
GG P
Sbjct: 114 GGNKP 118
>BC036785-1|AAH36785.1| 290|Homo sapiens chromosome 20 open reading
frame 10 protein.
Length = 290
Score = 31.9 bits (69), Expect = 5.4
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 257 RLRKVEIDVMIPKLIREKAKQEKCIEEVAQFEKCCKDASLLMVVKC-RSPNAALKDCLSN 433
RLR V ++ + KL++ ++ I+E+ + K C SLL V K R + C
Sbjct: 38 RLRTVLKNLSLLKLLKSSNRR---IQELHKLAKRCWH-SLLSVPKILRISSGENSACNKT 93
Query: 434 WYNNEEFKKI-CTEEYLKER 490
NNEEF++I C+E+ LK +
Sbjct: 94 KQNNEEFQEIGCSEKELKSK 113
>AL021578-12|CAC18107.1| 290|Homo sapiens chromosome 20 open
reading frame 10 protein.
Length = 290
Score = 31.9 bits (69), Expect = 5.4
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 257 RLRKVEIDVMIPKLIREKAKQEKCIEEVAQFEKCCKDASLLMVVKC-RSPNAALKDCLSN 433
RLR V ++ + KL++ ++ I+E+ + K C SLL V K R + C
Sbjct: 38 RLRTVLKNLSLLKLLKSSNRR---IQELHKLAKRCWH-SLLSVPKILRISSGENSACNKT 93
Query: 434 WYNNEEFKKI-CTEEYLKER 490
NNEEF++I C+E+ LK +
Sbjct: 94 KQNNEEFQEIGCSEKELKSK 113
>AB017802-1|BAA76405.1| 290|Homo sapiens clg01 protein.
Length = 290
Score = 31.9 bits (69), Expect = 5.4
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 257 RLRKVEIDVMIPKLIREKAKQEKCIEEVAQFEKCCKDASLLMVVKC-RSPNAALKDCLSN 433
RLR V ++ + KL++ ++ I+E+ + K C SLL V K R + C
Sbjct: 38 RLRTVLKNLSLLKLLKSSNRR---IQELHKLAKRCWH-SLLSVPKILRISSGENSACNKT 93
Query: 434 WYNNEEFKKI-CTEEYLKER 490
NNEEF++I C+E+ LK +
Sbjct: 94 KQNNEEFQEIGCSEKELKSK 113
>K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary
proline-rich protein 1 gene, segment 1. ).
Length = 173
Score = 31.5 bits (68), Expect = 7.2
Identities = 38/156 (24%), Positives = 40/156 (25%), Gaps = 8/156 (5%)
Frame = +1
Query: 895 GHPPGXGGXXXGPPFPXPXPXTXXXPXXRXGGXGFXXPXGGXXGFPXXGGXXRKXLXXXG 1074
G PP G GPP P P P + G P G P G R
Sbjct: 21 GPPPQGGNKPQGPP---PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGKRSRSPRSP 77
Query: 1075 PXXAXTXKXAXXXXXXXXXXXXXXPKXXPXXGG-XPXGLXXPXXPXKPP---RXPXSXXX 1242
P P+ P GG P G P P PP S
Sbjct: 78 PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRS 137
Query: 1243 XRXXXXXPXXG----XXXXPPGGXXXGGXPXGGXXP 1338
R P G PP G G GG P
Sbjct: 138 PRKPQGPPPQGGNQPQGPPPPPGKPQGPPQQGGNRP 173
>S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein.
Length = 382
Score = 31.1 bits (67), Expect = 9.5
Identities = 33/143 (23%), Positives = 36/143 (25%), Gaps = 1/143 (0%)
Frame = +1
Query: 895 GHPPGXGGXXXGPPFPXPXPXTXXXPXXRXGGXGFXXPXGGXXGFPXXGGXXRKXLXXXG 1074
G PP G GPP P P P + G P G P G +
Sbjct: 148 GPPPQGGNQPQGPP---PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSP 204
Query: 1075 PXXAXTXKXAXXXXXXXXXXXXXXPKXXPXXGG-XPXGLXXPXXPXKPPRXPXSXXXXRX 1251
P P+ P GG G P P PP P R
Sbjct: 205 PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKSQGPPPPGKPQGPP--PQGGSKSRS 262
Query: 1252 XXXXPXXGXXXXPPGGXXXGGXP 1320
P P GG G P
Sbjct: 263 SRSPPGKPQGPPPQGGNQPQGPP 285
>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.1 bits (67), Expect = 9.5
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 895 GHPPGXGGXXXGPPFPXPXPXTXXXPXXRXGG-XGFXXPXGGXXG 1026
G PPG GG PP P P R GG G P G G
Sbjct: 889 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG 933
>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.1 bits (67), Expect = 9.5
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 895 GHPPGXGGXXXGPPFPXPXPXTXXXPXXRXGG-XGFXXPXGGXXG 1026
G PPG GG PP P P R GG G P G G
Sbjct: 889 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG 933
>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1146
Score = 31.1 bits (67), Expect = 9.5
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 895 GHPPGXGGXXXGPPFPXPXPXTXXXPXXRXGG-XGFXXPXGGXXG 1026
G PPG GG PP P P R GG G P G G
Sbjct: 889 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG 933
>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.1 bits (67), Expect = 9.5
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 895 GHPPGXGGXXXGPPFPXPXPXTXXXPXXRXGG-XGFXXPXGGXXG 1026
G PPG GG PP P P R GG G P G G
Sbjct: 889 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG 933
>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR protein
rA4 protein.
Length = 1157
Score = 31.1 bits (67), Expect = 9.5
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 895 GHPPGXGGXXXGPPFPXPXPXTXXXPXXRXGG-XGFXXPXGGXXG 1026
G PPG GG PP P P R GG G P G G
Sbjct: 899 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG 943
>AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein.
Length = 929
Score = 31.1 bits (67), Expect = 9.5
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 895 GHPPGXGGXXXGPPFPXPXPXTXXXPXXRXGG-XGFXXPXGGXXG 1026
G PPG GG PP P P R GG G P G G
Sbjct: 671 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG 715
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,736,855
Number of Sequences: 237096
Number of extensions: 2672981
Number of successful extensions: 8125
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7768
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19292815168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -