Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_D10
         (1280 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   8.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   8.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   8.3  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   8.3  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -1

Query: 698  CLQTKKPPLPAVVCLPDQELPTLFPKV 618
            C       L  V C  DQ L T+FPKV
Sbjct: 3123 CYPVTHGELNYVNCYSDQGLVTIFPKV 3149


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 15/59 (25%), Positives = 21/59 (35%)
 Frame = -1

Query: 296  RYPVSGRVGTGERTRELPGGNAWYLYSPVGXXXXXXXXXXX*CSYRGAEPMEKRQQRGL 120
            RY    + G     R    GN  Y+Y+P G              Y     + K +QRG+
Sbjct: 1881 RYEYDNQSGLLTLKRTPDAGNTRYMYTPEGLLRFVVQQNSSNVMYYTYNSVGKLKQRGI 1939


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 15/59 (25%), Positives = 21/59 (35%)
 Frame = -1

Query: 296  RYPVSGRVGTGERTRELPGGNAWYLYSPVGXXXXXXXXXXX*CSYRGAEPMEKRQQRGL 120
            RY    + G     R    GN  Y+Y+P G              Y     + K +QRG+
Sbjct: 1882 RYEYDNQSGLLTLKRTPDAGNTRYMYTPEGLLRFVVQQNSSNVMYYTYNSVGKLKQRGI 1940


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 117 YGSWPFAGLLLTCXFLRYPPDSVGXP*GI-LRIPYMSL 7
           +GSW + G ++    L+  PDS     GI L+  Y+S+
Sbjct: 166 FGSWTYDGYMVDLRHLQQTPDSDNIDIGIDLQDYYISV 203


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,109,741
Number of Sequences: 2352
Number of extensions: 23317
Number of successful extensions: 79
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147148920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)