Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_D10
(1280 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein. 32 5.2
BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein. 32 5.2
AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein. 32 5.2
CR457371-1|CAG33652.1| 225|Homo sapiens PREI3 protein. 31 6.8
BC005237-1|AAH05237.1| 225|Homo sapiens preimplantation protein... 31 6.8
AL080070-1|CAB45697.1| 194|Homo sapiens hypothetical protein pr... 31 6.8
AJ580638-1|CAE45270.1| 225|Homo sapiens Mob1 protein protein. 31 6.8
AF250319-1|AAG44567.1| 193|Homo sapiens CGI95-iso protein. 31 6.8
AF151853-1|AAD34090.1| 225|Homo sapiens CGI-95 protein protein. 31 6.8
AF137396-7|AAG41681.1| 326|Homo sapiens HOR5'Beta7 protein. 31 6.8
AF093825-1|AAP97221.1| 223|Homo sapiens 2C4D protein. 31 6.8
AC020550-2|AAX93147.1| 225|Homo sapiens unknown protein. 31 6.8
AB015441-1|BAB19057.1| 225|Homo sapiens Mob3 protein. 31 6.8
AK027043-1|BAB15635.1| 225|Homo sapiens protein ( Homo sapiens ... 31 9.0
>BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein.
Length = 299
Score = 31.9 bits (69), Expect = 5.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 309 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 181
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein.
Length = 293
Score = 31.9 bits (69), Expect = 5.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 309 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 181
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein.
Length = 482
Score = 31.9 bits (69), Expect = 5.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 309 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 181
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>CR457371-1|CAG33652.1| 225|Homo sapiens PREI3 protein.
Length = 225
Score = 31.5 bits (68), Expect = 6.8
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 CTSITKIDAQVRG-GETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 337
C++I KI G E Y+ R+F LE A+ + PDTC + E W FL
Sbjct: 51 CSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLC 110
Query: 338 A 340
A
Sbjct: 111 A 111
>BC005237-1|AAH05237.1| 225|Homo sapiens preimplantation protein 3
protein.
Length = 225
Score = 31.5 bits (68), Expect = 6.8
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 CTSITKIDAQVRG-GETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 337
C++I KI G E Y+ R+F LE A+ + PDTC + E W FL
Sbjct: 51 CSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLC 110
Query: 338 A 340
A
Sbjct: 111 A 111
>AL080070-1|CAB45697.1| 194|Homo sapiens hypothetical protein
protein.
Length = 194
Score = 31.5 bits (68), Expect = 6.8
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 CTSITKIDAQVRG-GETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 337
C++I KI G E Y+ R+F LE A+ + PDTC + E W FL
Sbjct: 51 CSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLC 110
Query: 338 A 340
A
Sbjct: 111 A 111
>AJ580638-1|CAE45270.1| 225|Homo sapiens Mob1 protein protein.
Length = 225
Score = 31.5 bits (68), Expect = 6.8
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 CTSITKIDAQVRG-GETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 337
C++I KI G E Y+ R+F LE A+ + PDTC + E W FL
Sbjct: 51 CSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLC 110
Query: 338 A 340
A
Sbjct: 111 A 111
>AF250319-1|AAG44567.1| 193|Homo sapiens CGI95-iso protein.
Length = 193
Score = 31.5 bits (68), Expect = 6.8
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 CTSITKIDAQVRG-GETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 337
C++I KI G E Y+ R+F LE A+ + PDTC + E W FL
Sbjct: 19 CSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLC 78
Query: 338 A 340
A
Sbjct: 79 A 79
>AF151853-1|AAD34090.1| 225|Homo sapiens CGI-95 protein protein.
Length = 225
Score = 31.5 bits (68), Expect = 6.8
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 CTSITKIDAQVRG-GETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 337
C++I KI G E Y+ R+F LE A+ + PDTC + E W FL
Sbjct: 51 CSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLC 110
Query: 338 A 340
A
Sbjct: 111 A 111
>AF137396-7|AAG41681.1| 326|Homo sapiens HOR5'Beta7 protein.
Length = 326
Score = 31.5 bits (68), Expect = 6.8
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 253 LVRSPVPTLPLTGYLSAFLPSGSVALSHS 339
+ R PV T+P+ L AF GSV LSHS
Sbjct: 161 IFRGPVATIPIVLLLKAFPYCGSVVLSHS 189
>AF093825-1|AAP97221.1| 223|Homo sapiens 2C4D protein.
Length = 223
Score = 31.5 bits (68), Expect = 6.8
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 CTSITKIDAQVRG-GETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 337
C++I KI G E Y+ R+F LE A+ + PDTC + E W FL
Sbjct: 49 CSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLC 108
Query: 338 A 340
A
Sbjct: 109 A 109
>AC020550-2|AAX93147.1| 225|Homo sapiens unknown protein.
Length = 225
Score = 31.5 bits (68), Expect = 6.8
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 CTSITKIDAQVRG-GETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 337
C++I KI G E Y+ R+F LE A+ + PDTC + E W FL
Sbjct: 51 CSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLC 110
Query: 338 A 340
A
Sbjct: 111 A 111
>AB015441-1|BAB19057.1| 225|Homo sapiens Mob3 protein.
Length = 225
Score = 31.5 bits (68), Expect = 6.8
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 CTSITKIDAQVRG-GETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 337
C++I KI G E Y+ R+F LE A+ + PDTC + E W FL
Sbjct: 51 CSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLC 110
Query: 338 A 340
A
Sbjct: 111 A 111
>AK027043-1|BAB15635.1| 225|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23390 fis, clone HEP17176. ).
Length = 225
Score = 31.1 bits (67), Expect = 9.0
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 CTSITKIDAQVRG-GETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 337
C++I KI G E Y+ R+F LE A+ + PDTC + E W FL
Sbjct: 51 CSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQGECHPDTCTQMTATEQWIFLC 110
Query: 338 A 340
A
Sbjct: 111 A 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,206,561
Number of Sequences: 237096
Number of extensions: 3613159
Number of successful extensions: 16098
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16094
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18385440820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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