Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_D09
         (1288 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    67   2e-13
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   1.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   6.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   6.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   8.6  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 67.3 bits (157), Expect = 2e-13
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = +3

Query: 858 LQDVYKIGGIGTVPVGRVETGVLKPGTXVVFAP 956
           LQDVYKIGGIGTVPVGRVETGVLKPG  VVFAP
Sbjct: 1   LQDVYKIGGIGTVPVGRVETGVLKPGMVVVFAP 33



 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 20/24 (83%), Positives = 20/24 (83%)
 Frame = +2

Query: 953  PANITXEVKSVXMHHEALKXAVPG 1024
            PANIT EVKSV MHHEAL  AVPG
Sbjct: 33   PANITTEVKSVEMHHEALPEAVPG 56


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 926 QHTSFN-SADGHGTNTTDFVYVLQ 858
           ++ SFN +A+GHG NT+   Y  Q
Sbjct: 280 EYNSFNWTANGHGHNTSSHNYYAQ 303


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 288 LDKLKAERERGITIDIALWKFETSKYYVTII 380
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 288 LDKLKAERERGITIDIALWKFETSKYYVTII 380
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -2

Query: 120  PCPFLVSHGLQTACNIRDRLQPEW 49
            P P  V+ G+ T  +  + + P+W
Sbjct: 1012 PAPPQVTTGVDTGASSTEHMHPDW 1035


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,908
Number of Sequences: 336
Number of extensions: 5897
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37918809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)